BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg936241 Length=844 Score E Sequences producing significant alignments: (Bits) Value AT3G25640.1 | Symbols: | Protein of unknown function, DUF617 |... 1347 0.0 > AT3G25640.1 | Symbols: | Protein of unknown function, DUF617 | chr3:9333719-9334804 FORWARD LENGTH=1086 Length=1086 Score = 1347 bits (729), Expect = 0.0 Identities = 811/850 (95%), Gaps = 7/850 (1%) Strand=Plus/Plus Query 1 TTTTGTATATTCATTTAAAGAGATGAAGTCAATCTTAGCCAACACTTCTCTCGATTCTTC 60 |||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 35 TTTTGTATTTTCATTTAAAGAGATGAAATCAATCTTAGCCAACACTTCTCTCGACTCTTC 94 Query 61 ATTCTCTCTCTCAAAACGTTACTTCAATTGgaagaagaagaaagttcaagaagacgacga 120 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 95 ATTCTCTCTTTCTAAACGTTACTTCAATTGGAAGAAGAAGAAAGTTCAAGAAGACGACGA 154 Query 121 cgaggaagaggaagaagaagaagacgattacaacaacaacgaagagaaAA-TCTTGACCC 179 ||| |||||||||||||||||||||||||||||| |||||| ||| |||| ||||||||| Sbjct 155 CGAAGAAGAGGAAGAAGAAGAAGACGATTACAACCACAACG-AGAAAAAAGTCTTGACCC 213 Query 180 GTTTCAATTTCTCCTCTGACCCGACCCGACCGGATCAATTCAATATTCAACACATAATGA 239 ||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct 214 GTTTCAATTTCTCCTCTGACCCGACCCGACCGGATCAGTTCAATGCCCAACAGATAATGA 273 Query 240 AGaaaaaaaagaaaaaGACTATCGAAAAGATCCGTTACGCTCTCGGGTTCTCTAACTCGG 299 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 274 AGAAAAAAAAGAAAAAGACTCTCGAAAAGATCCGTTACGCTCTCGGGTTCTCTAACTCGG 333 Query 300 GTCTGGGTTTCCGGGTCGTGGGTACGTTATTCGGTAACCGTCGTGGACACGTGTACTTCG 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 334 GTCTGGGTTTCCGGGTCGTGGGTACGTTATTCGGTAACCGTCGTGGACACGTGTACTTCG 393 Query 360 CCGTACAAGATGACCCGACCCGTTTACCCGCGGTGTTGATCCAGTTACCAACTCCAACGA 419 ||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||| Sbjct 394 CCGTACAAGATGACCCGACTCGTTTACCTGCGGTGTTGATCCAGTTACCGACTCCAACGA 453 Query 420 GCGTTCTTGTCCGTGAGATGGCTTCAGGGCTAGTGAGAATCGCGCTCGAAACGGCTGCGT 479 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 454 GCGTTCTTGTCCGTGAAATGGCTTCAGGGCTAGTGAGAATCGCGCTCGAAACGGCTGCGT 513 Query 480 TTAAGACGGATTCGAAGAAGAAGCTTTTAGAAGAGTCCACGTGGAGAACGTATTGTAACG 539 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 514 ATAAGACAGATTCAAAGAAGAAGCTTTTAGAAGAGTCCACGTGGAGAACGTATTGTAACG 573 Query 540 GTAAAAAATGTGGATACGCGGCGAGGAAAGAGTGTGGAGAAGCGGAGTGGAAGGTGTTGA 599 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 574 GTAAAAAATGTGGTTACGCGGCGAGGAAAGAGTGTGGAGAAGCGGAGTGGAAGGTGTTGA 633 Query 600 AGGCGGTTGGGCCCATAACAATGGGTGCTGGAGTTTTACCGGCGGC-A--ACGACGGTGG 656 ||||||||||||| |||||||||||||||||||||||||||||| | | |||||||||| Sbjct 634 AGGCGGTTGGGCCTATAACAATGGGTGCTGGAGTTTTACCGGCGACTACGACGACGGTGG 693 Query 657 ATGAAGAAGGGAATGGAGCGGTTGGGTCCGAAAAAGGTGAGCTCATGTATATGAGAGCCC 716 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 694 ATGAAGAAGGGAATGGAGCGGTTGGGTCCGAAAAAGGTGAACTCATGTATATGAGAGCCC 753 Query 717 GGTTCGAGCGGGTTATCGGGTCGAAAGACTCGGAGGCGTTTTATATGATGAATCCTGATG 776 |||||||||||||| ||||||||| |||||||||||||||||| |||||||| ||||||| Sbjct 754 GGTTCGAGCGGGTTGTCGGGTCGAGAGACTCGGAGGCGTTTTACATGATGAACCCTGATG 813 Query 777 TGTCAAGTGGTGGACCTGAGCTTAGTGTGTATTTTCTAAGGGTTTAAGGGGAAAAT--GA 834 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct 814 TGTCAAGTGGTGGACCTGAGCTTAGTGTGTATTTTCTAAGGGTTTAATGCGAAAAAAAGA 873 Query 835 TAAGATTAGT 844 |||||||||| Sbjct 874 TAAGATTAGT 883 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41141766393 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5