BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg936283 Length=1174 Score E Sequences producing significant alignments: (Bits) Value AT3G25910.1 | Symbols: | Protein of unknown function (DUF1644)... 1493 0.0 > AT3G25910.1 | Symbols: | Protein of unknown function (DUF1644) | chr3:9489221-9491130 FORWARD LENGTH=1515 Length=1515 Score = 1493 bits (808), Expect = 0.0 Identities = 1041/1150 (91%), Gaps = 30/1150 (3%) Strand=Plus/Plus Query 2 TTGTTGTTAGTTCTAGAACATGCCGAAAGAGAGGAAAGAACGGTCGGTATCTCTTGATAA 61 ||||| |||||| | ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 202 TTGTTACTAGTTCCAAAACATGCCGAAAGAGAGGAAAGAACGGTCCGTATCTCTTGATAA 261 Query 62 GTATAGACGATCGCCACTGTGTAGTGAGTCAAG-CTGTGCTTTGAAGCCGAGTGAGAAAC 120 ||||| |||||||||||||||| ||||| |||| || ||||||||||||||||||||||| Sbjct 262 GTATAAACGATCGCCACTGTGTTGTGAGGCAAGCCT-TGCTTTGAAGCCGAGTGAGAAAC 320 Query 121 AAGTTAAGGAATGGGAAGAGGCTCGTTGTCCCGTTTGTATGGAACATCCTCACAATGGGA 180 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 321 AAGTTAAGGAATGGGAAGAGGCTCGTTGTCCTGTTTGTATGGAACATCCTCACAATGGGA 380 Query 181 TTCTTCTCATTTGTTCTTCTTATGAAAACGGTTGTCGACCTTACATGTGCGACACTAGCC 240 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 381 TTCTTCTCATTTGTTCTTCTTATGAAAATGGTTGTCGACCTTACATGTGCGACACTAGCC 440 Query 241 ATCGGCATTCTAACTGTTTCGATCAGTTCCGCAAAGCTTCTAAAGAGAAACCGTCTTTGT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 441 ATCGGCATTCTAACTGTTTCGATCAGTTCCGCAAAGCTTCTAAAGAGAAACCTTCTTTGT 500 Query 301 CTTTACTTCATGAGGAAGAGGAAAGTAATGAACCAACTGAGATGGAAGATGTAGCTTCTG 360 ||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||| | Sbjct 501 CTTTACTTCGTGAGGAAGAGGAAAGTAATGAACCAACTGAGATGGAAGATGTGGATTCAG 560 Query 361 ACTCAACTGCTGTAAATCTAAGAGGAGAAGCTGCATCTGAGTTAACAGATGTG-AGTTTa 419 |||||||||||||||||||| ||||||||||||||||||| |||||| |||| | |||| Sbjct 561 ACTCAACTGCTGTAAATCTATTAGGAGAAGCTGCATCTGAGATAACAGTTGTGGA-TTTA 619 Query 420 agagaaggtgagagaggagaagaagaagaagaaggtgagagagga-gaagaagaagtagt 478 || || |||||||||||||||||||||| ||||| || ||| || |||| || ||||| Sbjct 620 AGTGATGGTGAGAGAGGAGAAGAAGAAGTAGAAGAAGA-AGAAGAAGAAGTAGTAGTAGA 678 Query 479 agaagaagaag--g-aattgtagcaacagaggaagaccaagaaaaaaaCAAACCGCCGAA 535 ||||||||||| | ||||||| ||||||| ||||| ||||||||||||||||| | || Sbjct 679 AGAAGAAGAAGAAGGAATTGTAACAACAGAAGAAGATCAAGAAAAAAACAAACCACAAAA 738 Query 536 GCTTACTTGCCCGTTATGCCGTGGACATATAAAAGAATGGGTAGTTGTTGAAGCAGCTCG 595 ||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct 739 GCTTACTTGTCCGTTATGTCGTGGACATATAAAAGAATGGGTAGTTGTTAAAGCAGCTCG 798 Query 596 ATATTTCATGAACTCAAAACATAGAAGCTGTTCGTCCGAGACTTGTGATTTCAGCGGAAC 655 || |||||||||||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct 799 ATGTTTCATGAACTCAAAACATAGAAGCTGTTCTTGTGAGACTTGTGATTTCAGTGGAAG 858 Query 656 CTATTCCGATTTGAGAAAGCACGCAAGGCTTCTGCATCCAGGAGTTAGGCCATCAGAAGC 715 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 859 CTATTCCGATCTGAGAAAGCACGCAAGGCTTCTACATCCAGGAGTTAGGCCATCAGAAGC 918 Query 716 AGATCCAGAGAGACAGAGAAGCTGGAGGAGGCTAGAAAGGCAGAGAGATTTAGGGGATTT 775 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 919 AGATCCAGAGAGACAGAGAAGCTGGAGGAGGCTAGAAAGGCAGAGCGATTTAGGGGATTT 978 Query 776 AATTAGCACACTC-AATTCTTCTTTTGGAGGAGAAGAAAGAAGTAACGACAATGGGATTC 834 | ||||||||||| ||| |||||||||||||||| |||| ||||||||| ||||| ||| Sbjct 979 ACTTAGCACACTCCAAT-CTTCTTTTGGAGGAGATGAAATAAGTAACGATGATGGGTTTC 1037 Query 835 TATTTGATGGTA---GCTTGCTTACAGTG-ATCTTTCTCATCCGCGTGTTTAGACCTGAG 890 |||||| || || |||||||||||||| | |||||||||||||||||||||||| || Sbjct 1038 TATTTGCTGATACTCGCTTGCTTACAGTGTA-CTTTCTCATCCGCGTGTTTAGACCAGAA 1096 Query 891 TCGAGTGGCTCAAGGAGTAGTAGTAGTAGCTGGTCTGGTGCATCTAGAGCTAGGTCACAG 950 ||||||||||||||||||||||| |||||||||| |||||||||||||| |||| Sbjct 1097 TCGAGTGGCTCAAGGAGTAGTAG------CTGGTCTGGTACATCTAGAGCTAGGACACAT 1150 Query 951 ATAGGTGGGAGAAGAAGGCCA-CATAGATCTCCAGGGCTTTGGGGAGAGAGCTATGAAGG 1009 | | ||||||||||||| | || ||| || || | ||||||||||||||||||||||| Sbjct 1151 ACAAGTGGGAGAAGAAGATCTTCA-AGACCTGCAAGTCTTTGGGGAGAGAGCTATGAAGG 1209 Query 1010 TAATACAGGAACATCATCTAGAGATGAGGAGAATAATATTCAGTCTTCTGATGAACAAGA 1069 |||||||||||||||| |||||||||||||||||||| || |||||||||||||||| Sbjct 1210 TAATACAGGAACATCACCTAGAGATGAGGAGAATAAT---CAATCTTCTGATGAACAAGT 1266 Query 1070 GTCTGTAACTCGGAGACGACGTCGTTCTAGGAGAAGAGCTATCATtgatgatgacgatga 1129 ||||| |||||||||||| ||||||||| |||||| || ||||||||||||| ||||| Sbjct 1267 GTCTGGAACTCGGAGACG---TCGTTCTAGAAGAAGAACTGTCATTGATGATGATGATGA 1323 Query 1130 tgatgatgaA 1139 || || ||| Sbjct 1324 AGAAGAAGAA 1333 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57630225660 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5