BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg936802 Length=704 Score E Sequences producing significant alignments: (Bits) Value ATCG00790.1 | Symbols: RPL16 | ribosomal protein L16 | chrC:811... 320 1e-86 > ATCG00790.1 | Symbols: RPL16 | ribosomal protein L16 | chrC:81189-82652 REVERSE LENGTH=408 Length=408 Score = 320 bits (173), Expect = 1e-86 Identities = 179/182 (98%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 523 CCAAAAAGAACCAGATTTCGTAAACAACATCGAGGAAGACTAAAAGGAATATCTTCTCGT 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10 CCAAAAAGAACCAGATTTCGTAAACAACATCGAGGAAGACTAAAAGGAATATCTTCTCGT 69 Query 583 GGGAATCATATTTGTTTTGGCAGATATGCTCGTCAAACACTTGAACCCGCTTGGATCACA 642 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 70 GGGAATCGTATTTGTTTTGGCAGATATGCTCTTCAAACACTTGAACCCGCTTGGATCACA 129 Query 643 TCTAGACAAATAGAAGCAGGGCGACGAGCAATGACACGAAATGTACGACGTGGTGGAAAA 702 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 130 TCTAGACAAATAGAAGCAGGGCGACGCGCAATGACACGAAATGTACGACGTGGTGGAAAA 189 Query 703 AT 704 || Sbjct 190 AT 191 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34108985813 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5