BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg936976

Length=728
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G43800.1 | Symbols: ATGSTU27, GSTU27 | glutathione S-transfe...  1186    0.0  
  AT5G62480.1 | Symbols: ATGSTU9, GST14, GST14B, GSTU9 | glutathi...  76.8    3e-13
  AT1G10370.1 | Symbols: GST30, ATGSTU17, GST30B, ERD9 | Glutathi...  65.8    6e-10


> AT3G43800.1 | Symbols: ATGSTU27, GSTU27 | glutathione S-transferase 
tau 27 | chr3:15660859-15661925 FORWARD LENGTH=895
Length=895

 Score = 1186 bits (642),  Expect = 0.0
 Identities = 699/727 (96%), Gaps = 2/727 (0%)
 Strand=Plus/Plus

Query  1    AAGAAGAAGGTCAAACaaaaaaa-aaTGTCAGAAGAAGAAGTGGTGGTGTTGAACTTCTG  59
            ||||||||| ||||| |||||||  |||||||||||||||||||||||||||||||||||
Sbjct  47   AAGAAGAAGATCAAA-AAAAAAAGGATGTCAGAAGAAGAAGTGGTGGTGTTGAACTTCTG  105

Query  60   GCCAAGCATGTTCGGAGCAAGAGTGATCATGGCGTTAGAGGAGAAAGAGATCAAGTTCGA  119
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct  106  GCCAAGCATGTTCGGAGCAAGAGTGATCATGGCATTAGAGGAGAAAGAGATCAAGTTCGA  165

Query  120  GTATAAGGAAGAAGATGTGTTTGGTCAGAAGACCGATCTATTGCTCCAAAGCAACCCGGT  179
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  166  GTACAAGGAAGAAGATGTGTTTGGTCAGAAGACCGATCTATTGCTCCAAAGCAACCCGGT  225

Query  180  TCACAAGAAGATCCCGGTTCTCATCCACAACGGTAAACCTGTATGCGAGTCCAATATCAT  239
            | ||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct  226  TAACAAGAAAATTCCGGTTCTCATCCACAACGGTAAACCGGTATGCGAGTCCAATATCAT  285

Query  240  AGTCGAATACATCGATGAGGTCTGGAAAGACGATAAGACTCTCCGTCTACTACCTTCTGA  299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  286  AGTCGAATACATCGATGAGGTCTGGAAAGACGATAAGACTCTCCGTCTACTACCTTCTGA  345

Query  300  TCCATATGAGAAGTCACAGTGTAGATTTTGGGCTGATTTGATTGACAAAAAGGTTTTTGA  359
            ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  346  TCCTTATCAGAAGTCACAGTGTAGATTTTGGGCTGATTTGATTGACAAAAAGGTTTTTGA  405

Query  360  CGCTGGAAGAAGAACATGGACAAAGAGGGGTAAAGAACAAGAAGAAGCGAAACAAGAGTT  419
            ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct  406  CGCTGGAAGAAGAACGTGGACAAAGAGGGGCAAAGAACAAGAAGAAGCGAAACAAGAGTT  465

Query  420  CATAGAGATCTTGAAAGTGTTAGAAAGAGAGCTTGGAGATAAGGTCTACTTCGGAGGAAA  479
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  466  CATAGAGATATTGAAAGTGTTAGAAAGAGAGCTTGGAGATAAGGTCTACTTCGGAGGAAA  525

Query  480  CGACAACGTTTCGATGGTGGACTTGGTCCTCATCTCCTACTACCCTTGGTTCCACACGTG  539
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct  526  CGACAACGTTTCGATGGTGGACTTGGTTCTCATCTCCTACTACCCTTGGTTCCACACATG  585

Query  540  GGAGACGATTGGTGGTTTTAGTGTCGAGGATCACACTCCCAAGCTAATGGACTGGATCCG  599
            |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct  586  GGAGACTATTGGTGGTTTTAGTGTCGAGGACCACACTCCCAAGCTAATGGACTGGATCCG  645

Query  600  TAAATGCTTAACCCGACCCGCTATCTCGAAATCTTTACCTGACCCACTAAAGATTTTTGA  659
            ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||
Sbjct  646  TAAATGCTTAACCCGACCCGCTATCTCGAAATCTTTACCTGACCCGCTGAAGATATTTGA  705

Query  660  TCGAGTCACTCAGATCATAAAGGTCCATGAGTTCTTCTATGGTTATTGATTCTCCAAATC  719
            ||||||||||||||||||||||||||||||||| ||||||||||||||||  || |||||
Sbjct  706  TCGAGTCACTCAGATCATAAAGGTCCATGAGTTTTTCTATGGTTATTGATAGTCTAAATC  765

Query  720  GTACGCT  726
             || |||
Sbjct  766  ATATGCT  772


> AT5G62480.1 | Symbols: ATGSTU9, GST14, GST14B, GSTU9 | glutathione 
S-transferase tau 9 | chr5:25088694-25089620 REVERSE LENGTH=858
Length=858

 Score = 76.8 bits (41),  Expect = 3e-13
 Identities = 45/47 (96%), Gaps = 0/47 (0%)
 Strand=Plus/Plus

Query  172  AACCCGGTTCACAAGAAGATCCCGGTTCTCATCCACAACGGTAAACC  218
            |||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct  208  AACCCGGTTCACAAGAAGATCCCGGTTCTTGTCCACAACGGTAAACC  254


> AT1G10370.1 | Symbols: GST30, ATGSTU17, GST30B, ERD9 | Glutathione 
S-transferase family protein | chr1:3397081-3398358 REVERSE 
LENGTH=962
Length=962

 Score = 65.8 bits (35),  Expect = 6e-10
 Identities = 72/89 (81%), Gaps = 6/89 (7%)
 Strand=Plus/Plus

Query  172  AACCCGGTTCACAAGAAGATCCCGGTTCT-CATCCACAACGG-TAAACCTGT-ATGCGAG  228
            ||||||||||||||||||||||||||||| | || |   | | |||||| || | | |||
Sbjct  230  AACCCGGTTCACAAGAAGATCCCGGTTCTGCTTC-ATG-CTGATAAACCGGTGA-GTGAG  286

Query  229  TCCAATATCATAGTCGAATACATCGATGA  257
            ||||| ||||| || || || ||||||||
Sbjct  287  TCCAACATCATCGTTGAGTATATCGATGA  315



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 35314605341


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5