BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg937016
Length=1386
Score E
Sequences producing significant alignments: (Bits) Value
AT3G44110.1 | Symbols: ATJ3, ATJ | DNAJ homologue 3 | chr3:1586... 2176 0.0
AT5G22060.1 | Symbols: ATJ2, J2 | DNAJ homologue 2 | chr5:73036... 1260 0.0
> AT3G44110.1 | Symbols: ATJ3, ATJ | DNAJ homologue 3 | chr3:15868794-15871256
REVERSE LENGTH=1781
Length=1781
Score = 2176 bits (1178), Expect = 0.0
Identities = 1321/1390 (95%), Gaps = 10/1390 (1%)
Strand=Plus/Plus
Query 1 TTCGTTAGAACGGCGAAAAGATGTTCGGTAGAGGACCCTCGAAGAAGAGCGACAACACTA 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 178 TTCGTTACAACGGCGAAAAGATGTTCGGTAGAGGACCCTCGAAGAAGAGCGACAACACTA 237
Query 61 AGTTCTACGAGATCTTAGGTGTTCCTAAGAGCGCATCACCAGAAGATCTCAAGAAAGCTT 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 238 AGTTCTACGAGATCTTAGGTGTTCCTAAGAGCGCTTCACCAGAAGATCTCAAGAAAGCTT 297
Query 121 ACAAAAAAGCTGCTATCAAGAACCATCCTGATAAGGGTGGAGATCCCGAGAAGTTCAAAG 180
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || |
Sbjct 298 ACAAAAAAGCCGCTATCAAGAATCATCCTGATAAGGGTGGAGATCCCGAGAAGTTTAAGG 357
Query 181 AGTTAGCTCAAGCTTATGAAGTTCTTAGTGACCCGGAGAAGCGTGAGATTTATGACCAGT 240
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 358 AGTTAGCACAAGCTTATGAAGTGCTTAGTGACCCGGAGAAGCGTGAGATTTATGACCAGT 417
Query 241 ATGGAGAGGATGCACTCAAGGAAGGAATGGGTGGTGGAGGAGGTGGACATGATCCATTTG 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 ATGGAGAGGATGCACTCAAGGAAGGAATGGGTGGTGGAGGAGGTGGACATGATCCATTTG 477
Query 301 ATATTTTCTCATCCTTCTTTGGTCGAAGCCCCTTTGGAGATGGTGGTAGCAGCCGGGGAA 360
||||||||||||||||||||||| || |||||||||||| | | || ||||||| ||
Sbjct 478 ATATTTTCTCATCCTTCTTTGGTGGAGGCCCCTTTGGAG--G-TAATACCAGCCGGCAAA 534
Query 361 GGAGGCAGAGGCGTGGTGAAGATGTTGTTCATCCTTTGAAGGTTTCTCTTGAGGATGTGT 420
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct 535 GGAGGCAGAGGCGTGGTGAGGATGTTGTTCATCCCTTGAAGGTATCTCTTGAGGATGTGT 594
Query 421 ACCTTGGAACAATGAAGAAGCTCTCACTTTCTAGGAATGCTCTCTGCTCAAAGTGTAACG 480
||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 595 ACCTTGGTACAATGAAGAAGCTTTCACTTTCTAGGAATGCTCTCTGCTCTAAGTGTAACG 654
Query 481 GAAAGGGGTCAAAATCTGGAGCCTCCATGAAATGTGGTGGATGTCAAGGTTCTGGTATGA 540
||||||| |||||||||||||||||| |||||||||| || ||||| || ||||||||||
Sbjct 655 GAAAGGGATCAAAATCTGGAGCCTCCTTGAAATGTGGAGGGTGTCAGGGATCTGGTATGA 714
Query 541 AGGTGTCAATTAGGCAGCTCGGACCTGGAATGATCCAGCAGATGCAGCATGCATGTAATG 600
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 715 AGGTGTCTATTAGGCAGCTTGGACCTGGAATGATCCAGCAGATGCAGCATGCATGTAATG 774
Query 601 AATGCAAAGGAACAGGTGAGACCATCAATGATCGCGACAGATGTCCGCAATGCAAAGGAG 660
|||||||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||
Sbjct 775 AATGCAAAGGGACAGGTGAGACCATCAATGATCGGGACAGGTGTCCACAATGCAAAGGAG 834
Query 661 ACAAGGTGATTCCTGAGAAGAAGGTGCTTGAAGTGAATGTGGAGAAGGGAATGCAACACA 720
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 835 ACAAGGTCATTCCTGAGAAGAAGGTGCTTGAAGTGAATGTGGAGAAGGGAATGCAACACA 894
Query 721 GTCAGAAGATCACATTCGAAGGACAAGCGGATGAAGCGCCTGACACTGTCACTGGAGATA 780
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 895 GTCAGAAGATCACATTTGAAGGACAAGCAGATGAAGCGCCTGACACTGTCACTGGAGATA 954
Query 781 TAGTGTTTGTCCTTCAGCAGAAAGAGCATCCGAAGTTCAAGAGAAAGGGTGAAGACCTCT 840
|||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||
Sbjct 955 TAGTGTTTGTCCTTCAGCAGAAAGAGCACCCAAAGTTCAAGAGAAAGGGAGAAGACCTCT 1014
Query 841 TTGTGGAGCACACACTTTCTCTAACAGAAGCTTTATGTGGCTTTCAATTTGTTCTGACTC 900
||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||
Sbjct 1015 TTGTGGAGCACACACTTTCTCTAACCGAAGCTTTGTGTGGCTTCCAATTTGTTCTGACTC 1074
Query 901 ACTTGGATGGCAGAAATCTTCTCATTAAATCTAATCCTGGGGAGGTCGTGAAACCTGATT 960
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1075 ACTTGGATGGCAGAAGTCTTCTCATTAAATCTAATCCTGGGGAGGTCGTGAAACCTGATT 1134
Query 961 CATACAAGGCAATTAGCGATGAAGGAATGCCGATATACCAGAGGCCATTCATGAAGGGTA 1020
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1135 CATACAAGGCAATAAGCGATGAAGGAATGCCGATATACCAGAGGCCATTCATGAAGGGTA 1194
Query 1021 AGCTCTACATCCACTTCACAGTGGAGTTCCCAGACTCGCTGAGCCCTGATCAAACCAAAG 1080
||||||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||
Sbjct 1195 AGCTCTACATCCACTTCACAGTGGAGTTCCCGGACTCGTTGAGCCCAGATCAGACCAAAG 1254
Query 1081 CACTGGAAGCTGTGCTGCCTAAACCCTCAACAACTCAATTGAGTGACATGGAGATAGATG 1140
||||||||||||| || ||||| || |||||| |||| ||||||||||||||||||||||
Sbjct 1255 CACTGGAAGCTGTTCTACCTAAGCCGTCAACAGCTCAGTTGAGTGACATGGAGATAGATG 1314
Query 1141 AATGCGAGGAGACCACGCTCCACGATGTCAACATTGAGGATGAAATGAAGAGGAAGGCAC 1200
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 1315 AATGCGAGGAGACCACGCTCCACGATGTCAACATTGAGGATGAGATGAGGAGGAAGGCAC 1374
Query 1201 AAGCTCAAAGAGAGGCTTATGACGATGACGATGAAGATGATGACCATCCCGGTGGTGCTC 1260
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 1375 AAGCTCAAAGAGAGGCTTATGATGATGACGATGAAGATGATGACCATCCGGGTGGTGCTC 1434
Query 1261 AAAGGGTGCAATGTGCTCAGCAGTAAGTAACTCCTTAGAGAGAGACTATT-ACCCACATG 1319
|||||||||||||||| |||||||||||||||||||||||||| || || |||||||||
Sbjct 1435 AAAGGGTGCAATGTGCCCAGCAGTAAGTAACTCCTTAGAGAGA--CT-TTGACCCACATG 1491
Query 1320 GGTTTGG-CTCCAACCA-TTTGTCTCTTGCTTTTTCATTCTAAGTGTATTGGAGTCTT-A 1376
||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 1492 GGTTTGGGCTCCAACCAATTTGTCTCTTGCTTTTTCATTCTAAGTGTATTGGAGTCTTTA 1551
Query 1377 TGGGAGTTTG 1386
||||||||||
Sbjct 1552 TGGGAGTTTG 1561
> AT5G22060.1 | Symbols: ATJ2, J2 | DNAJ homologue 2 | chr5:7303622-7305797
REVERSE LENGTH=1565
Length=1565
Score = 1260 bits (682), Expect = 0.0
Identities = 1107/1307 (85%), Gaps = 49/1307 (4%)
Strand=Plus/Plus
Query 1 TTCGTTAGAAC-G-GC-GAAAAGATGTTCGGTAGAGGACCCTCGAA-GAAGAGCGACAAC 56
||||| ||||| | || |||| ||||| || |||||||| || || ||||||||| |||
Sbjct 107 TTCGTAAGAACAGAGCAAAAAACATGTTTGGAAGAGGACCTTC-AAGGAAGAGCGATAAC 165
Query 57 ACTAAGTTCTACGAGAT-CTTAGGTGTTCCTAAGAGCGCATCACCAGAAGATCTCAAGAA 115
|| |||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||
Sbjct 166 ACAAAGTTCTACGAGATCCTT-GGTGTTCCTAAGACCGCAGCACCAGAAGATCTCAAGAA 224
Query 116 AGCTTACAAAAAAGCTGCTATCAAGAACCATCCTGATAAGGGTGGAGATCCCGAGAAGTT 175
|||||| || ||||| |||||||| |||||||||||||||||||| |||||||| |||||
Sbjct 225 AGCTTATAAGAAAGCCGCTATCAAAAACCATCCTGATAAGGGTGGTGATCCCGAAAAGTT 284
Query 176 CAAAGAGTTAGCTCAAGCTTATGAAGTTCTT-AGTGACCCGGAGAAGCGTGAGATTTATG 234
||||||||||| || |||||||||||| || ||||| || |||||||||||||| ||||
Sbjct 285 TAAAGAGTTAGCACAGGCTTATGAAGTT-TTAAGTGATCCTGAGAAGCGTGAGATCTATG 343
Query 235 ACCAGTATGGAGAGGATGCACTCAAGGAAGGAATGGGTGGTGGAGGAGGTGGACATGATC 294
| || ||||| || |||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 344 ATCAATATGGGGAAGATGCACTCAAGGAAGGAATGGGTGGTGGAGGTGGTGGACACGATC 403
Query 295 CATTTGATATTTTCTCATCCTTCTTT-G--GTCGAAG-C-CCC-TTTGGAGATGGTGGTA 348
|||||||||| ||||| ||||||||| | || | | | ||| || ||| | || |
Sbjct 404 CATTTGATATCTTCTCTTCCTTCTTTGGTAGTGGTGGACACCCATTCGGA-A--GT--CA 458
Query 349 GCAGCCGGGGAAGGAGGCAGAGGCGTGGTGAAGATGTTGTTCATCCTTTGAAGGTTTCTC 408
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 459 -TAGCCGGGGAAGGAGGCAGAGGCGTGGTGAAGATGTTGTTCATCCCTTGAAGGTTTC-C 516
Query 409 TT-GAGGATGTGTACCTTGGAACAATGAAGAAGCTCTCACTTTCTAGGAATGCTCTCTGC 467
|| |||||||| || || ||||||| ||||||||||||||||||||||| ||| | |||
Sbjct 517 TTAGAGGATGTTTATCTCGGAACAACAAAGAAGCTCTCACTTTCTAGGAAGGCTTTGTGC 576
Query 468 TCAAAGTGTAACGGAAAGGGGTCAAAATCTGGAGCCTCCATGAAATGTGGTGGATGTCAA 527
|||||||||||||| ||||| ||||| |||||||| || |||||||||||||| ||||||
Sbjct 577 TCAAAGTGTAACGGCAAGGGTTCAAAGTCTGGAGCTTCAATGAAATGTGGTGGCTGTCAA 636
Query 528 GGTTCTGGTATGAAGGTGTCAATTAGGCAGCTCGGACCTGGAATGATCCAGCAGATGCAG 587
||||| || |||||| | || || |||||| | |||||||||||||| |||||| |||||
Sbjct 637 GGTTCGGGAATGAAGATCTCGATCAGGCAGTTTGGACCTGGAATGATGCAGCAGGTGCAG 696
Query 588 CATGCATGTAATGAATGCAAAGGAACAGGTGAGACCATCAATGATCGCGACAGATGTCCG 647
||||| |||||||| |||||||| ||||| ||||||||||||||||| ||||| |||||
Sbjct 697 CATGCTTGTAATGATTGCAAAGGCACAGGAGAGACCATCAATGATCGGGACAGGTGTCCA 756
Query 648 CAATGCAAAGGAGACAAGGT-GAT-TCCTGAGAAGAAGGTGCTTGAAGTGAATGTGGAGA 705
|||||||||||||| ||||| | | || ||||||||||||||||||||| ||||||||||
Sbjct 757 CAATGCAAAGGAGAGAAGGTTG-TCTC-TGAGAAGAAGGTGCTTGAAGTAAATGTGGAGA 814
Query 706 AGGGAATGCAACACAGTCAGAAGATCACATTC-GAAGGACAAGCGGATGAAGCGCCTGAC 764
||||||||||||||| |||||||||||||||| | |||||||| ||||||||||||||
Sbjct 815 AGGGAATGCAACACAATCAGAAGATCACATTCAGT-GGACAAGCCGATGAAGCGCCTGAT 873
Query 765 ACTGTCACTGGAGATATAGTGTTTGTCCTTCAGCAGAAAGAGCATCCGAAGTTCAAGAGA 824
|||||||| |||||||||||||||||| |||||||||| ||||| || |||||||| |||
Sbjct 874 ACTGTCACCGGAGATATAGTGTTTGTCATTCAGCAGAAGGAGCACCCAAAGTTCAAAAGA 933
Query 825 AAGGGTGAAGACCTCTTTGTGGAGCACACACTT-TCTCTAACAGAAGCTTTATGTGGCTT 883
|||||||| || ||||||||||||||||| | | |||||||| || || || ||||||||
Sbjct 934 AAGGGTGAGGATCTCTTTGTGGAGCACAC-CATCTCTCTAACCGAGGCCTTGTGTGGCTT 992
Query 884 TCAATTTGTTCT-GACTCACTTGGATGGCAGAAATCTTCTCATTAAATCTAATCCTGGGG 942
|| ||||| || ||| || ||||| ||| | |||||||| ||||| || || || |
Sbjct 993 CCAGTTTGT-CTTGACCCATTTGGACAAAAGACAGCTTCTCATCAAATCCAAGCCCGGAG 1051
Query 943 AGGTCGTGAAACCTGATTCATACAAGGCAATTAGCGATGAAGGAATGCCGATATACCAGA 1002
||||||| |||||||||||||||||||| || || ||||| |||||||| |||||||| |
Sbjct 1052 AGGTCGTCAAACCTGATTCATACAAGGCGATAAGTGATGAGGGAATGCCAATATACCAAA 1111
Query 1003 GGCCATTCATGAAGGGTAAGCTCTACATCCACTTCACAGTGGAGTTCCCAGACTCGCTGA 1062
|||| ||||||||||||||||| ||||| |||||||| || || ||||| || |||||||
Sbjct 1112 GGCCGTTCATGAAGGGTAAGCTATACATTCACTTCACGGTTGAATTCCCGGAATCGCTGA 1171
Query 1063 GCCCTGATCAAACCAAAG-C-ACTGGAAGCTGTGCTGCCTAAACCCTCAAC-AACTCAA- 1118
|||| ||||| || |||| | | || |||| || |||| ||| || ||| || ||
Sbjct 1172 GCCCGGATCAGAC-AAAGGCCATTG-AAGCAGTTTTGCC-AAAGCC--AACCAAGGCAGC 1226
Query 1119 T-TGAGTGACATGGAGATAGATGAATGCGAGGAGACCACGCTCCACGATGTCAACATTGA 1177
| | || || ||||| ||||| || ||||| ||||| || || || ||||| ||||||||
Sbjct 1227 TATAAGCGATATGGAAATAGACGACTGCGAAGAGACGACTCTGCATGATGTGAACATTGA 1286
Query 1178 GGATGAAATGAAGAGGAAGGCACAAGCTCAAAGAGAGGCTTATGACGATGACGATGAAGA 1237
|||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||| ||
Sbjct 1287 GGATGAGATGAAAAGGAAGGCGCAAGCTCAAAGAGAGGCTTATGA---TGACGATGAGGA 1343
Query 1238 TGATGACCATCCCGGTGGTGCTCAAAGGGTGCAATGTGCTCAGCAGT 1284
||| ||| | || |||||||| | ||||||||||| |||||||
Sbjct 1344 AGATCACC--CA-GGCGGTGCTCAGCGTGTGCAATGTGCCCAGCAGT 1387
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68272741200
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5