BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg937235 Length=899 Score E Sequences producing significant alignments: (Bits) Value AT3G45600.1 | Symbols: TET3 | tetraspanin3 | chr3:16733755-1673... 1426 0.0 > AT3G45600.1 | Symbols: TET3 | tetraspanin3 | chr3:16733755-16735951 REVERSE LENGTH=1173 Length=1173 Score = 1426 bits (772), Expect = 0.0 Identities = 846/883 (96%), Gaps = 0/883 (0%) Strand=Plus/Plus Query 16 AAGCTATGAGATCAAGCAACCATCTCATAGGTTTAGTCAACTTCCTCACTTTCCTCCTCT 75 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 93 AAGCTATGAGAACAAGCAACCATCTCATAGGTTTAGTCAACTTCCTCACTTTCCTCCTCT 152 Query 76 CAATCCCAATCCTCGGCGGTGGAATATGGTTAAGCAGCCGAGCAAACTCCACCGACTGTT 135 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 153 CAATACCAATCCTCGGCGGTGGAATATGGTTAAGCAGCCGAGCTAACTCCACCGACTGTT 212 Query 136 TAAGATTCCTCCAGTGGCCTCTCATCGTCATCGGAATCTCAATCATGGTCGTATCTTTAG 195 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 213 TAAGATTCCTTCAATGGCCTCTCATCGTCATCGGAATCTCAATCATGGTCGTATCTTTAG 272 Query 196 CAGGATTCGCTGGAGCTTGTTACCGTAACAAGTTCCTTATGTGGCTATACCTAGTTGCCA 255 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 273 CTGGATTCGCTGGAGCTTGTTACCGTAACAAGTTCCTTATGTGGCTATACCTAGTAGTCA 332 Query 256 TGCTTCTTATCATCGCCGCTCTCATCGGTTTCATCATCTTCGCTTACGCGGTTACCGATA 315 ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| |||| Sbjct 333 TGCTTCTCATCATCGCTGCTCTTATCGGTTTCATCATCTTCGCTTACGCGGTTACAGATA 392 Query 316 AAGGATCCGGTCGAACCGTGCTTAACCGGGGTTATCTTGACTATTATCTTCAAGATTACT 375 ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| Sbjct 393 AAGGATCCGGTCGAACCGTACTTAACCGGGGTTATCTTGACTATTATCTTGAAGATTACT 452 Query 376 CTGGTTGGTTGAAAGATCGAGTCTCTGATGATAGTTATTGGGGTAAAATAAGTTCTTGTC 435 |||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| Sbjct 453 CTGGTTGGTTGAAAGATCGAGTTTCTGATGATAGCTATTGGGGTAAAATTAGTTCTTGTC 512 Query 436 TTAGAGATTCTGGTGCTTGTAGGAAGATTGGAAGGAATTTTAATGGTGTCCCTGAAACTG 495 |||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| Sbjct 513 TTAGAGATTCTGGTGCTTGTAGAAAGATTGGAAGAAATTTTAATGGTGTACCTGAAACTG 572 Query 496 CTGATATGTTCTTCCTTAGAAGACTTAGCCCTGTTGAGTCCGGTTGTTGCAAGCCACCAA 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 573 CTGATATGTTCTTCCTTAGAAGACTTAGCCCTGTTGAGTCCGGTTGTTGCAAGCCACCAA 632 Query 556 CAGATTGTGGTTTTTCATATGTCAATGAGACCGGATGGGACACGAGAGGAGGGATGATAG 615 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 633 CAGATTGCGGTTTTTCATATGTGAATGAGACCGGATGGGACACGAGAGGAGGGATGATAG 692 Query 616 GACCGAACCAGGACTGTATGGTGTGGAGCAATGACCAGAGCATGCTCTGTTATCAGTGTA 675 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 693 GACCGAACCAGGACTGTATGGTGTGGAGCAACGACCAGAGCATGCTCTGTTATCAGTGTA 752 Query 676 GTTCTTGTAAAGCTGGTGTTCTTGGGAGCTTGAAGAAGAGCTGGAGAAAAGTATCGGTGA 735 |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 753 GTTCTTGTAAAGCTGGTGTTCTTGGGAGTTTGAAGAAGAGTTGGAGAAAAGTATCGGTGA 812 Query 736 TTAACATCGTGGTACTTATCATTCTCGTTATCTTCTATGTTATCGCTTATGCTGCTTATA 795 | ||||| ||||||||||||||||| |||||||| || |||||||||||||| ||||||| Sbjct 813 TCAACATTGTGGTACTTATCATTCTAGTTATCTTTTACGTTATCGCTTATGCAGCTTATA 872 Query 796 GGAATGTCAAGAGGATTGATAACGATGAGCCGGCTGGTGAAGCTAGGATGACAAAATCAC 855 |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct 873 GGAATGTCAAGAGGATCGATAACGATGAACCGGCTGGTGAAGCTAGGATGACAAAATCAC 932 Query 856 AACCTAGTCATTTCCACCTTTGATCAAAATTTGGTATAGTTCA 898 | |||||||||||||| ||||||||||||||||| | |||||| Sbjct 933 ATCCTAGTCATTTCCATCTTTGATCAAAATTTGGAACAGTTCA 975 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43904644478 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5