BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg937351

Length=809
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G46500.1 | Symbols:  | 2-oxoglutarate (2OG) and Fe(II)-depen...   676    0.0  
  AT3G46480.1 | Symbols:  | 2-oxoglutarate (2OG) and Fe(II)-depen...   122    4e-27


> AT3G46500.1 | Symbols:  | 2-oxoglutarate (2OG) and Fe(II)-dependent 
oxygenase superfamily protein | chr3:17120480-17122745 
FORWARD LENGTH=1212
Length=1212

 Score =  676 bits (366),  Expect = 0.0
 Identities = 400/417 (96%), Gaps = 0/417 (0%)
 Strand=Plus/Plus

Query  274  GGGGATTACAAAGAAAGTTTTTTCATTGGAATCGAAGGCTCCAACGATACACCATTCTGT  333
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  389  GGGGATTACAAAGAAAGTTTTTTCATTGGAATCGAAGGCTCCAACGATACACCATTCTGT  448

Query  334  CGCGCTAACATTTGGCCTAACCCTGATGTTTTGCCGGGATGGCAGGCGACCATGGAGAAA  393
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct  449  CGCGCTAACATTTGGCCTAACCCTGATGTTTTGTCGGGATGGCAGGCGACCATGGAGAAA  508

Query  394  TACCATCAAGAAGCATTGAGGGTTTGTAAGGCTATTGCTAGAGTACTGGCATTGGCGCTC  453
            || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct  509  TATCATCAAGAAGCATTGAGGGTTTGTAAGGCTATTGCTAGAGTATTGGCATTGGCGCTC  568

Query  454  GATGTGGATGGAGATTACTTTGATAAACCAGAAATGCTGGGAAATCCCCTCGCATTTATG  513
             | |||||||||||||||||||||| ||| |||||||| |||||||||||| ||||||||
Sbjct  569  AACGTGGATGGAGATTACTTTGATACACCGGAAATGCTTGGAAATCCCCTCACATTTATG  628

Query  514  CGCTTGCTTCACTATGAAGGGATGTCTGATCCCTCGAAAGGAATATATGGATGCGGGCCA  573
            ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct  629  CGCTTGCTTCACTATGAAGGGATGTCTGATCCCTCAAAAGGAATATATGGCTGCGGGCCA  688

Query  574  CATTCTGATTTCGGAATGATGACTCTCTTAGCAACCGATAGTGTAATGGGGCTCCAGATA  633
            ||||||||||| || |||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct  689  CATTCTGATTTTGGTATGATGACTCTCTTAGGAACGGATAGTGTAATGGGGCTCCAGATA  748

Query  634  TGCAAGGATAGAGACGTGAAGCCTAGGAAGTGGGAATATATACCATCGATTAAAGGG  690
            ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct  749  TGCAAGGATAGAGACGTGAAGCCTAGGAAGTGGGAATATATACTATCGATAAAAGGG  805


 Score =  257 bits (139),  Expect = 1e-67
 Identities = 145/148 (98%), Gaps = 0/148 (0%)
 Strand=Plus/Plus

Query  128  AGGCATGTCTAGATTGTGGATTTTTCTATGTCACAAATCATGGTATTAGTGAGGAGTTAA  187
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct  198  AGGCATGTCTAGATTGTGGATTTTTCTATGTCACAAATCATGGTATAAGTGAGGAGTTAA  257

Query  188  AGGACGAGGCTTTCGAGCAAAGCAAGAAGTTCTTTGCTCTTCCTTTGGACGAGAAAATGA  247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct  258  AGGACGAGGCTTTCGAGCAAAGCAAGAAGTTCTTTGCTCTTCCTTTGGACGAGAAGATGA  317

Query  248  AAGTCTTGAAAAACGAAAAGCATCAAGG  275
            ||||||||||||||||||| ||||||||
Sbjct  318  AAGTCTTGAAAAACGAAAAACATCAAGG  345


 Score =  150 bits (81),  Expect = 2e-35
 Identities = 99/108 (92%), Gaps = 0/108 (0%)
 Strand=Plus/Plus

Query  24   GGAAAACAAAACTCAAGAGGAAGCTTCGACCATCAATGTTTCATCTCTTACTTGCATAGA  83
            ||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||| |||||
Sbjct  1    GGAGAACAAAACTCAAGAGGAAGCTTCGACCATTAATGTTTCATCCCTTGCTTGTATAGA  60

Query  84   TCTCGCCAACACCAATCTTCATCAATCAGCTGATGCGCTTAAGCAGGC  131
            |||||||||| |||||||||||| |||||||| | |||||||||||||
Sbjct  61   TCTCGCCAACTCCAATCTTCATCGATCAGCTGCTTCGCTTAAGCAGGC  108


> AT3G46480.1 | Symbols:  | 2-oxoglutarate (2OG) and Fe(II)-dependent 
oxygenase superfamily protein | chr3:17103173-17105594 
FORWARD LENGTH=861
Length=861

 Score =  122 bits (66),  Expect = 4e-27
 Identities = 99/114 (87%), Gaps = 5/114 (4%)
 Strand=Plus/Plus

Query  22   ATGGAAAACAAAACTCAAGAGGAAGCTTCGACCATCAATGTTTCATCTCTTACTTGCATA  81
            ||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct  1    ATGGAGAACAAAACTCAAGAGGAAGCTTCGACCATCAAAGTTTCATCCCTTACTTGCATA  60

Query  82   GATCTCGCCAACACC-AATCTT-CATCAATCAGCTGATGCGCTTAAGCAG-GCA  132
            ||||| |||||| || || ||| || |||||||| | | | ||||| ||| |||
Sbjct  61   GATCTTGCCAAC-CCGAA-CTTTCAACAATCAGCGGTTTCTCTTAAACAGAGCA  112


 Score =  104 bits (56),  Expect = 1e-21
 Identities = 64/68 (94%), Gaps = 0/68 (0%)
 Strand=Plus/Plus

Query  208  AGCAAGAAGTTCTTTGCTCTTCCTTTGGACGAGAAAATGAAAGTCTTGAAAAACGAAAAG  267
            ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||
Sbjct  109  AGCAAGAAGTTCTTTGCTCTTCCTTTGGAGGAGAAAATGAAAGTCTTGAGAAATGAAAAG  168

Query  268  CATCAAGG  275
            |||| |||
Sbjct  169  CATCGAGG  176


 Score = 63.9 bits (34),  Expect = 2e-09
 Identities = 34/34 (100%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  277  GATTACAAAGAAAGTTTTTTCATTGGAATCGAAG  310
            ||||||||||||||||||||||||||||||||||
Sbjct  229  GATTACAAAGAAAGTTTTTTCATTGGAATCGAAG  262



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 39383571248


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5