BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg937481 Length=1613 Score E Sequences producing significant alignments: (Bits) Value AT3G47420.1 | Symbols: ATPS3, PS3 | phosphate starvation-induce... 2512 0.0 AT4G17550.1 | Symbols: | Major facilitator superfamily protein... 209 6e-53 > AT3G47420.1 | Symbols: ATPS3, PS3 | phosphate starvation-induced gene 3 | chr3:17472342-17475258 REVERSE LENGTH=2016 Length=2016 Score = 2512 bits (1360), Expect = 0.0 Identities = 1532/1616 (95%), Gaps = 7/1616 (0%) Strand=Plus/Plus Query 1 GAATTGAAGAAC-AGTTTTTTCATGGGTTCTTTAATGCAATCTGAGCCAGAGATGGAGCA 59 ||| |||||||| || |||| ||||||||| ||||||||||||| |||||||||||| | Sbjct 226 GAACTGAAGAACAAG--TTTTGATGGGTTCTCTAATGCAATCTGAACCAGAGATGGAGAA 283 Query 60 AAAACCAG-TAGGGATACGATTCTTGGAACGTATCAAAGGCTCAAAGCTCTCTTACAATG 118 |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 284 AAAACC-GATAGGGATACGATTCTTGGAACGTATCAAAGGCTCAAAGCTCTCTTACAGTG 342 Query 119 CTTATCAAGCCATAGTGTTGATCGTGACGTTTCTCGCTTACGCTAGTTATCACGCTGCAA 178 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 343 CTTATCAAGCCATAGTGTTGATCGTGACGTTTCTCGCTTACGCTAGCTATCACGCTGCAA 402 Query 179 GAAAAACAACAAGCATTGTCAAGAGTGCTCTTGATCCTCAATCTCCAGATACAGGACTAA 238 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 403 GAAAAACAACAAGTATTGTCAAAAGTGCTCTTGATCCTCAATCTCCAGATACAGGACTAA 462 Query 239 ACTCACTTCTTTTGAGGTTTACTTCTTTTGGCTCCTCTGTTAAAGAAGAAGGTGGTTGGG 298 |||||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||| Sbjct 463 ACTCACTTCTTTTGAGATTTACTTCGTTTGGTTCCTCTGTAAAAGAAGAAGGTGGTTGGG 522 Query 299 CTCCGTTT-AATGGTCCGGATGGTACGGTTTTGCTCGGTGAGATCGATGTTGCGTTTCTT 357 |||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 523 CTCC-TTTCAATGGTCCTGATGGTACGGTTTTGCTCGGTGAGATCGATGTTGCGTTTCTT 581 Query 358 GCGGTTTACGCTTTCGGAATGTATTTTGCTGGACATTTGGGAGATAGGATGAATCTTAGG 417 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 582 GCGGTTTACGCTTTCGGAATGTATTTCGCTGGACATTTGGGGGATAGGATGAATCTTAGG 641 Query 418 ATCTTCTTGACAGTTGGAATGATAGGAACTGGATTGTTTACTTCTCTGTTTGGAGTTGGT 477 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 642 ATCTTCTTGACTGTTGGAATGATAGGAACTGGATTGTTTACTTCTCTGTTTGGAGTTGGT 701 Query 478 TATTGGGCTAATATTCATAGCTTTTACTATTTCTTGATTATGCAAATGTTGGCTGGATTG 537 ||||||| ||| |||||||||||||||||||||||||| ||||||||||| ||||| ||| Sbjct 702 TATTGGGGTAACATTCATAGCTTTTACTATTTCTTGATAATGCAAATGTTAGCTGGTTTG 761 Query 538 TTTCAATCTTCGGGTTGGCCATCGGTTGTTGCTGTGGTTGGAAACTGGTTTAACAAGAAG 597 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 762 TTTCAATCTTCGGGTTGGCCATCGGTTGTTGCTGTTGTTGGAAACTGGTTTAACAAGAAG 821 Query 598 AAGAGAGGTTTGATTATGGGAATATGGAATGCTCATACTTCTGTTGGGAACATTACTGGC 657 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 822 AAGAGAGGTTTGATCATGGGGATATGGAATGCTCATACTTCTGTTGGGAACATTACTGGC 881 Query 658 TCGTTGATCGCTGCTGCTATGTTGAGATATGGTTGGGGATGGTCTTTTGTTGTTCCTGGT 717 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 882 TCGTTGATCGCTGCTGCTATGTTGAGATATGGTTGGGGATGGTCTTTTGTTGTTCCTGGT 941 Query 718 GTTATCATTGTGGTGATTGGTTTGGTGAATTTCGCTTTCTTGCCGGTTAATCCAGAGATT 777 ||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| | Sbjct 942 GTTATCATTGTGGTGATTGGTTTGGTGAATTACGCTTTCTTGCCTGTTAGTCCAGAGAAT 1001 Query 778 GTTGGAGCAGAGCGAGATGAGGATCTTGATTCGTCGTCTGAGAAGATCGGAAACTCTGTT 837 ||||||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||| Sbjct 1002 GTTGGAGCAGAGCGAGACGAGGTTCTTGATTCTTCGTCTGAGAAAATCGGAAACTCTGTT 1061 Query 838 AATGAGGCATTACTATTGAGCTCGTCGGATTCGGAAACCGATGACAAGAAACGAGCTGTT 897 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1062 AATGAGCCGTTACTATTGAGCTCGTCGGATTCGGAAACCGATGACAAGAAACGAGCTGTT 1121 Query 898 GGATTCATTGAAGCGTGGAGGATTCCCGGAGTTGCGCCTTTCGCGCTTTGTCTCTTCTTT 957 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1122 GGATTCATTGAAGCGTGGAGGATTCCCGGAGTTGCGCCTTTCGCGCTCTGTCTCTTCTTT 1181 Query 958 GCTAAATTGGTTGCTTACACTTTCCTCTACTGGCTCCCATTTTACGTTAGCCATACAGCG 1017 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1182 GCTAAGTTGGTCGCTTACACTTTCCTCTACTGGCTCCCATTTTACGTTAGCCATACAGCG 1241 Query 1018 ATTGAAGGCGAGTATTTATCGGACGAAACAGCGGGAAATCTTTCGACAATGTTCGATGTA 1077 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1242 ATTGAAGGCGAATATTTATCGGACGAAACAGCGGGAAATCTTTCGACAATGTTCGATGTA 1301 Query 1078 GGAGGTGTGGTCGGAGGAATCCTGGCTGGTTACATTTCAGACCGAATTGGTGCAAGAGCG 1137 ||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1302 GGAGGTGTGGTTGGTGGAATCATGGCTGGTTACATTTCAGACCGAATTGGTGCAAGAGCT 1361 Query 1138 ATTACGGCTGCGAGTTTCATGTACTGCTCAATCCCAGCTTTGTTCTTCTACCGAAGCTAC 1197 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 1362 ATTACGGCTGCGAGTTTCATGTACTGCTCAATTCCAGCTTTGTTCTTCTACCGTAGCTAC 1421 Query 1198 GGACATGTTTCGTTACTAGCCAATGCCTCGCTCATGTTCCTAACCGGAATGTTGGTTAAT 1257 |||||||| |||||| ||||||| || || ||||||||| | ||||| ||||||||||| Sbjct 1422 GGACATGTATCGTTATTAGCCAACGCGTCTCTCATGTTCTTGACCGGGATGTTGGTTAAC 1481 Query 1258 GGACCTTACGCTCTGATCACAACGGCAGTTTCAGCCGATCTTGGAACACACAGCTCATTG 1317 || ||||||||| |||| ||||||||||||||||| |||||||||||||||||||| ||| Sbjct 1482 GGTCCTTACGCTTTGATTACAACGGCAGTTTCAGCTGATCTTGGAACACACAGCTCGTTG 1541 Query 1318 AAAGGAAACTCGAGAGCTTTGGCTACGGTAACGGCTATAATCGATGGAACGGGATCAGTT 1377 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 1542 AAAGGAAACTCGAGAGCTTTGGCTACGGTAACGGCTATTATCGATGGAACGGGATCCGTT 1601 Query 1378 GGTGCTGCGGTTGGGCCATTGCTAACAGGTTACATATCGTCGAAGGGTAGCTGGAGCGCG 1437 || || ||||| || || || ||||| |||||||||||||||| ||||||||||| |||| Sbjct 1602 GGAGCGGCGGTCGGACCCTTACTAACGGGTTACATATCGTCGAGGGGTAGCTGGACCGCG 1661 Query 1438 GTTTTCACAATGTTGATGGGAGCTGCGTTTGTGGCTGGACTATTGTTGACGAGGCTGGTT 1497 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1662 GTTTTCACAATGTTGATGGGAGCTGCGTTTGTGGCTGGACTATTGTTGACGAGGCTGGTA 1721 Query 1498 ATGGCCGAAGTAGCGGAGAAGATAGCTGAGTCGAGACCATCGGAGGAATGTAGATCTCCA 1557 |||||||||||||||||||||||||||||||| || |||||||| |||||||||||||| Sbjct 1722 ATGGCCGAAGTAGCGGAGAAGATAGCTGAGTCTAGGCCATCGGAAGAATGTAGATCTCCG 1781 Query 1558 GTGGACTCCGTCCAAGATCATGTGATGGAAGTGTGATCACCAACTTTGATCGCCAT 1613 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1782 GTGGACTATGTCCAAGATCATGTGATGGAAGTGTGATCACCAACTTTGATCGCCAT 1837 > AT4G17550.1 | Symbols: | Major facilitator superfamily protein | chr4:9777648-9779738 REVERSE LENGTH=1925 Length=1925 Score = 209 bits (113), Expect = 6e-53 Identities = 312/404 (77%), Gaps = 30/404 (7%) Strand=Plus/Plus Query 337 GAGATCGATGTTGCGTTTCTTGCGGT-TTACGCTTTCGGAATGTATTTTGCTGGACATTT 395 ||||| ||||| ||||||||||| | |||| || | ||||||||| ||||||| ||||| Sbjct 352 GAGATTGATGTGGCGTTTCTTGC-TTGTTACTCTATAGGAATGTATGTTGCTGGTCATTT 410 Query 396 GGGAGATAGGATGAATCTTAGGA-T-CTTCTTGACAGTT--GGAATGATAGGAACTGGAT 451 ||| ||||| || |||| | || | ||| |||| || |||||||| || | ||| | Sbjct 411 GGGTGATAGTTTGGATCTGA-GATTGTTTC-TGAC--TTGGGGAATGATTGGGAGTGGGT 466 Query 452 TGTTTACTT--CTCTGTTTGG-AGTTGGTTA-TT-GGGCTAATATTCATAGC-TTTT-AC 504 | ||| || | ||||||| | | ||||| || || || |||||| || |||| Sbjct 467 TCTTT-GTTGGGT-TGTTTGGTA-TGGGTTATTTCTGG--AACATTCAT-GCGTTTTGGT 520 Query 505 TATTTCTTGATTATGCAAATGTTGGCTGGATTGTTTCAATCTTCGGGTTGGCCATCGGTT 564 | ||| ||| ||||||||||| |||||| |||||||| | | || |||||||| ||| Sbjct 521 TCTTT-TTGGTTATGCAAATGGCGGCTGGGTTGTTTCAGGCGACAGGATGGCCATCTGTT 579 Query 565 GTTGCTGTGGTTGGAAACTGGTTTAACAAGAA-GAAGAGAGGT-TTGATTATGGGAATAT 622 || ||||| ||||| || |||||| || || |||||||||| || || ||||| || | Sbjct 580 GTGGCTGTTGTTGGGAATTGGTTTGGGAA-AAGGAAGAGAGGTCTT-ATAATGGGGATTT 637 Query 623 GGAATGCTCATACTTCTGTTGGGAACATTACTGGCTCGTTGATCGCTGCTGCTATG-TTG 681 ||||||||||||||||||||||||||||| ||| || || || ||||||| | | ||| Sbjct 638 GGAATGCTCATACTTCTGTTGGGAACATTTGTGGTTCTTTAATTGCTGCTGGTGTTCTTG 697 Query 682 AGATATGGTTGGGGATGGTCTTTTGTTGTTCCTGGTGTTATCAT 725 | |||||||||||||||||||||| | | ||||||| || |||| Sbjct 698 A-ATATGGTTGGGGATGGTCTTTTATAGCTCCTGGTTTTGTCAT 740 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 79668264915 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5