BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg937778 Length=3051 Score E Sequences producing significant alignments: (Bits) Value AT3G49670.1 | Symbols: BAM2 | Leucine-rich receptor-like protei... 4726 0.0 AT5G65700.1 | Symbols: BAM1 | Leucine-rich receptor-like protei... 2462 0.0 AT3G49668.1 | Symbols: | other RNA | chr3:18417565-18418278 RE... 673 0.0 > AT3G49670.1 | Symbols: BAM2 | Leucine-rich receptor-like protein kinase family protein | chr3:18417568-18421106 FORWARD LENGTH=3452 Length=3452 Score = 4726 bits (2559), Expect = 0.0 Identities = 2898/3063 (95%), Gaps = 18/3063 (1%) Strand=Plus/Plus Query 1 GAAAGAG-a-aaaaaaaac-aaaaaaCCATGAAGcttcttcttcttcttctcctcctcct 57 ||||||| | ||||||||| |||||| ||||||||||||||||| || ||||||||||| Sbjct 146 GAAAGAGAAGAAAAAAAACAAAAAAAAAATGAAGCTTCTTCTTCTCCTCCTCCTCCTCCT 205 Query 58 cctcctccACATTTCTCATTCCTTCACCGTAGCTAAACCAATCACCGAGCTCAACGCTCT 117 ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct 206 TCTCCTCCACATTTCTCATTCCTTCACCGTCGCTAAACCAATCACCGAGCTCCACGCTCT 265 Query 118 TCTCTCACTCAAATCCTCCCTCACCATCGACGAACACTCACCTCT-C--ACCTCATGGAA 174 ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| Sbjct 266 TCTCTCACTCAAATCCTCCTTCACCATCGACGAACACTCACCTCTCCTGACCTCATGGAA 325 Query 175 CCTTTCAACAACCTTCTGTTCATGGACCGGTGTCACGTGCGACGtctctcgccggcacgt 234 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 326 CCTTTCAACAACTTTCTGTTCATGGACCGGTGTCACGTGCGACGTCTCTCTCCGTCACGT 385 Query 235 gacctctctcgacctctctggtcttaacctctccggaactctctcctcCGACGTAGCTCA 294 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 386 GACCTCTCTCGACCTCTCAGGTCTTAACCTCTCCGGAACTCTCTCCTCCGACGTAGCTCA 445 Query 295 TTTACCTCT-CTTACAGAATCTATCACTCGCTGCTAATCAGATCTCAGGTCCTATTCCGC 353 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 446 TTTACCTCTGC-TACAGAATCTATCACTCGCTGCTAATCAGATCTCAGGTCCTATTCCGC 504 Query 354 CGGAAATCTCCAATCTTTACGAGCTTCGTCATCTCAATCTCTCCAATAATGGCTTCAACG 413 || ||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| Sbjct 505 CGCAAATCTCCAATCTCTATGAGCTTCGTCACCTCAATCTCTCCAATAATGTCTTCAACG 564 Query 414 GTTCATATCCCGATGAACTCTCCTCTGGATTGGTGAATCTCCGTGTTCTCGATTTGTATA 473 |||||| |||||||||||||||||||||||||||||||||||||||||| || || || | Sbjct 565 GTTCATTTCCCGATGAACTCTCCTCTGGATTGGTGAATCTCCGTGTTCTTGACTTATACA 624 Query 474 ACAACAACTTAACCGGAGATTTACCGGTTTCAATCACTAATCTGACTCAGCTCCGGCATC 533 ||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| |||| Sbjct 625 ACAACAATTTAACCGGAGATTTACCGGTTTCACTCACTAATCTCACTCAGCTCCGTCATC 684 Query 534 TTCACCTCGGTGGGAATTACTTCTCCGGTAAAATCCCGGCGACGTACGGAACCTGGCCTG 593 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 685 TTCACCTCGGTGGGAATTACTTCTCCGGCAAAATCCCGGCGACGTACGGAACCTGGCCTG 744 Query 594 TTCTCGAGTATC-TAGCGGTTTCCGGTAACGAGCTAATCGGTAAAATCCCTCCGGAGATC 652 ||||||| || | |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 745 TTCTCGAATA-CTTAGCGGTTTCCGGTAACGAGCTAACCGGTAAAATCCCTCCGGAGATC 803 Query 653 GGAAACCTAACGACTCTTCGTGAACTTTACATCGGATATTACAACGCTTTTGAAGATGGT 712 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 804 GGAAACCTAACGACTCTTCGTGAACTTTACATCGGATATTACAACGCTTTTGAAAATGGT 863 Query 713 CTTCCACCGGAGATTGGAAATTTGTCGGAGCTTGTTCGGTTCGACGCTGCTAATTGTGGT 772 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 864 CTTCCACCGGAGATTGGAAATTTATCAGAGCTTGTTCGGTTCGACGCTGCTAATTGTGGT 923 Query 773 TTAACCGGTGAGATTCCACCGGAGATTGGGAAGCTTCAGAAGCTAGATACGTTGTTTCTT 832 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 924 TTAACCGGAGAGATTCCACCGGAGATTGGGAAGCTTCAGAAGCTAGATACGTTGTTTCTT 983 Query 833 CAAGTAAATGCGTTTTCAGGGACATTAACTTC-AGAGCTGGGATTTATCTCAAGCTTGAA 891 |||||||| || ||| |||||||| |||| || |||||||||||| || ||||||||||| Sbjct 984 CAAGTAAACGCATTTACAGGGACAATAAC-TCAAGAGCTGGGATTGATTTCAAGCTTGAA 1042 Query 892 ATCAATGGATTTGTCTAACAATATGTTTACCGGTGAGATTCCGGCGAGTTTTTCACAGCT 951 ||| |||||| |||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct 1043 ATCGATGGATCTGTCTAACAATATGTTTACCGGCGAGATTCCGACGAGTTTTTCACAGCT 1102 Query 952 GAAGAACTTAACG-TTGTTGAATCTCTTCAGGAACAAGCTATACGGTGGTATACCTGAGT 1010 ||||||||||||| || ||||||||||||||||| ||||| ||||||| ||||||||||| Sbjct 1103 GAAGAACTTAACGCTT-TTGAATCTCTTCAGGAATAAGCTCTACGGTGCTATACCTGAGT 1161 Query 1011 TCATCGGTGAAATGCCGGAGCTAGAAGTGTTACAGCTTTGGGAGAACAATTTCACCGGTG 1070 |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| Sbjct 1162 TCATCGGTGAAATGCCGGAGCTTGAAGTGTTGCAGCTTTGGGAGAACAATTTCACTGGTA 1221 Query 1071 GTATTCCTCAGAAATTGGGGGAAAATGGTAGATTAGTGATTCTTGACCTCTCTTCAAACA 1130 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct 1222 GTATTCCTCAGAAATTGGGGGAAAATGGTAGATTAGTGATTCTTGATCTCTCTTCGAACA 1281 Query 1131 AACTCACCGGCACTTTGCCGCCGAATATGTGCTCCGGTAACCGGTTAATGACATTAATCA 1190 |||||||||| ||| |||||||||||||||| || ||||||||||||||||| ||||||| Sbjct 1282 AACTCACCGGAACTCTGCCGCCGAATATGTGTTCTGGTAACCGGTTAATGACGTTAATCA 1341 Query 1191 CTCTCGGTAACTTCTTGTTTGGTTCAATCCCGGATTCGCTTGGCAAATGTGAGTCTCTGA 1250 |||| || |||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 1342 CTCTTGGCAACTTCTTGTTTGGTTCAATACCGGATTCGCTTGGTAAATGTGAGTCTCTGA 1401 Query 1251 CCCGGATCCGAATGGGTGAGAATTTTCTCAACGGGTCGATTCCAAAGGGGCTTTTCGGGT 1310 |||||||||| |||||||||||||| || ||||||||||||||||||| ||| ||||||| Sbjct 1402 CCCGGATCCGGATGGGTGAGAATTTCCTTAACGGGTCGATTCCAAAGGAGCTCTTCGGGT 1461 Query 1311 TACCCAAATTATCTCAAGTGGAGCTTCAAGATAATTACCTCACCGGAGAGTTACCGATAA 1370 |||| |||||||||||||||||||| ||||| |||||||| ||||||||||| || |||| Sbjct 1462 TACCTAAATTATCTCAAGTGGAGCTCCAAGACAATTACCTTACCGGAGAGTTGCCAATAA 1521 Query 1371 GCGGAGGGGGAGTCTCTGGTGACCTTGGTCAGATTAGTCTGTCTAATAACCAGCTCTCTG 1430 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1522 GCGGAGGAGGAGTCTCTGGTGACCTTGGTCAGATTAGTCTTTCTAATAACCAGCTCTCTG 1581 Query 1431 GTCCATTACCTGCTGCTATTGGAAACTTCTCCGGTGTTCAAAAACTACTCCTTGATGGTA 1490 || |||||||||| |||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 1582 GTTCATTACCTGCAGCTATTGGAAACTTGTCCGGTGTTCAAAAACTACTTCTTGATGGTA 1641 Query 1491 ACAAGTT-TGCTGGTCCCATTCCACCGGAGATTGGGAGGCTTCAGCAGCTATCTAAGTTG 1549 ||||||| | ||||| | ||||| || ||||||||||||||||||||||||||||||||| Sbjct 1642 ACAAGTTCT-CTGGTTCGATTCCTCCCGAGATTGGGAGGCTTCAGCAGCTATCTAAGTTG 1700 Query 1550 GATTTTAGCCATAATCTGTTTTCGGGTCGGATCGCACCGGAGATCAGTCGTTGTAAGCTG 1609 ||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 1701 GATTTTAGCCACAATCTGTTCTCCGGTCGGATCGCACCGGAGATCAGTCGTTGTAAGCTG 1760 Query 1610 CTAACGTTTGTTGATCTGAGTCGTAATGAGCTCTCAGGTGATATTCCTAAAGAAATCACT 1669 ||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||| Sbjct 1761 CTAACGTTTGTTGATCTTAGCCGTAATGAGCTCTCAGGTGATATTCCTAATGAACTCACA 1820 Query 1670 GGTATGAGGATCTTGAATTACTTGAATCTTTCAAGAAACCATCTCGTTGGTTCGATACCT 1729 ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1821 GGTATGAAGATCTTGAATTACTTGAATCTTTCAAGAAACCATCTCGTTGGTTCCATACCT 1880 Query 1730 GTGACGATAGCATCAATGCAGAGTTTGACATCAGTTGATTTCTCTTACAACAATCTCTCT 1789 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1881 GTGACGATAGCATCAATGCAGAGTTTGACATCGGTTGATTTCTCTTACAACAATCTCTCC 1940 Query 1790 GGTCTAGTTCCGAGCACTGGACAGTTTAGTTACTTCAATTACACATCGTTTTTGGGTAAT 1849 ||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1941 GGTTTAGTTCCCAGCACTGGACAGTTTAGTTACTTCAATTACACATCGTTTGTGGGTAAC 2000 Query 1850 TCTGATCTTTGTGGTCCTTATTTGGGTCCTTGCGGAAAAGGAACTCACCAGCCTCATGTT 1909 ||| ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct 2001 TCTCATCTTTGTGGTCCGTATTTGGGTCCTTGCGGCAAAGGAACTCACCAGTCTCATGTC 2060 Query 1910 AAGCCTTTATCTGCTACTACAAAACTGTTACTCGTCCTCGGATTGCTCTTTTGTTCGATG 1969 || ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 2061 AAACCTTTATCTGCTACTACGAAACTGTTACTCGTCCTTGGATTGCTCTTTTGTTCGATG 2120 Query 1970 GTGTTTGCCATAGTGGCCATTACCAAAGCTCGGTCCTTGAGAAATGCGAGTGAAGCCAAG 2029 |||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||||| Sbjct 2121 GTGTTTGCTATAGTGGCCATAATCAAAGCTCGGTCCTTGCGAAATGCGAGTGAAGCCAAG 2180 Query 2030 GCATGGAGATTGACTGCTTTCCAGAGACTAGACTTCACTTGTGACGATGTCTTGGACTCT 2089 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2181 GCATGGAGATTGACTGCTTTCCAGAGGCTAGACTTCACTTGTGACGATGTCTTGGACTCT 2240 Query 2090 CTCAAGGAAGACAACATCATCGGTAAAGGCGGTGCCGGGATTGTCTACAAAGGCATTATG 2149 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct 2241 CTCAAGGAAGACAACATCATCGGTAAAGGCGGTGCTGGGATTGTCTACAAAGGCACTATG 2300 Query 2150 CCTAACGGCGATCTAGTCGCGGTCAAGA-GATTGGCTACAATGTCCCATGGATCTTCCCA 2208 ||||| ||||| |||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 2301 CCTAAAGGCGACCTAGTCGCGGTCAA-ACGATTGGCTACAATGTCCCATGGATCTTCCCA 2359 Query 2209 TGATCACGGGTTCAACGCCGAGATTCAAACGCTAGGTAGAATCAGACACAGACACATCGT 2268 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2360 CGATCACGGGTTCAACGCCGAGATTCAGACGCTAGGTAGAATCAGACACAGACACATCGT 2419 Query 2269 GAGACTGCTCGGGTTTTGCTCCAACCACGAAACGAATCTCCTAGTGTACGAGTACATGCC 2328 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2420 GAGACTGCTCGGTTTTTGCTCCAACCACGAAACGAATCTCCTTGTGTACGAGTACATGCC 2479 Query 2329 TAATGGTAGCCTTGGAGAGGTTCTTCATGGAAAGAAAGGAGGTCATTTACATTGGGACAC 2388 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2480 TAATGGTAGCCTTGGAGAGGTTCTTCATGGAAAGAAAGGAGGTCATTTACATTGGAACAC 2539 Query 2389 ACGTTATAAGATTGCTCTTGAAGCAGCCAAGGGTCTTTGCTATCTCCACCACGATTGTTC 2448 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2540 ACGTTATAAGATAGCTCTTGAAGCAGCCAAGGGTCTTTGCTATCTCCACCATGATTGTTC 2599 Query 2449 CCCGTTGATCGTTCATAGAGATGTTAAATCCAACAATATCCTCCTCGATTCCAACTTTGA 2508 |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 2600 CCCGTTGATCGTCCATAGAGATGTTAAATCCAACAACATCCTCCTCGATTCCAACTTCGA 2659 Query 2509 AGCTCATGTCGCCGATTTTGGCCTCGCCAAATTCCTCCAAGATTCTGGTACTTCTGAATG 2568 ||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||||||| Sbjct 2660 AGCTCATGTCGCCGACTTTGGTCTCGCCAAGTTCCTCCAAGATTCCGGTACTTCTGAATG 2719 Query 2569 TATGTCCGCCATCGCCGGCTCTTACGGCTACATAGCTCCAGAGTACGCGTATACATTGAA 2628 ||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2720 TATGTCCGCAATTGCCGGCTCCTACGGCTACATAGCTCCAGAGTACGCGTATACATTGAA 2779 Query 2629 GGTAGATGAGAAGAGTGATGTGTATAGTTTCGGTGTTGTTCTTCTAGAACTCATCACCGG 2688 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2780 GGTAGATGAGAAGAGCGATGTGTATAGTTTCGGTGTTGTTCTTCTAGAACTCATCACCGG 2839 Query 2689 GAAAAAACCCGTCGGAGAATTTGGTGACGGCGTTGATATCGTTCAATGGGTTAGAAGCAT 2748 |||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct 2840 GAAAAAACCCGTCGGAGAATTTGGCGACGGCGTTGATATTGTTCAATGGGTGAGAAGCAT 2899 Query 2749 GACGGATTCAAATAAAGATTGTGTGCTCAAAGTAATTGATCTTAGACTCTCTTCTGTACC 2808 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct 2900 GACGGATTCAAATAAAGATTGTGTGCTCAAAGTAATCGATCTTAGACTCTCTTCAGTTCC 2959 Query 2809 AGTTCACGAAGTAACACACGTCTTCTACGTTGCGTTGCTCTGCGTTGAAGAACAAGCGGT 2868 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2960 AGTTCACGAGGTAACACACGTCTTCTACGTTGCGTTGCTCTGCGTTGAAGAACAAGCGGT 3019 Query 2869 GGAGAGGCCGACGATGCGTGAAGTCGTTCAGATTCTCACTGAGATCCCAAAGATCCCTCT 2928 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 3020 GGAGAGGCCGACGATGCGTGAAGTCGTTCAGATTCTCACTGAGATCCCAAAAATTCCTCT 3079 Query 2929 TTCGAAGCAGCAGGCGGCGGAATCAGACGTGTCGGAGAAAGCTCCGGCGATTAATGAATC 2988 |||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct 3080 TTCGAAGCAGCAAGCGGCGGAATCAGACGTGACTGAGAAAGCTCCGGCGATTAATGAATC 3139 Query 2989 GTCGCCAGATTCAGGAAGTCCACCGGATCTTTTAAGTAATTAGACTTTCCGGCAATTGGG 3048 |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 3140 GTCGCCGGATTCAGGAAGTCCACCGGATCTTTTAAGTAATTAGACTTTCCGGCGATTGGG 3199 Query 3049 TTT 3051 ||| Sbjct 3200 TTT 3202 > AT5G65700.1 | Symbols: BAM1 | Leucine-rich receptor-like protein kinase family protein | chr5:26281757-26285247 FORWARD LENGTH=3383 Length=3383 Score = 2462 bits (1333), Expect = 0.0 Identities = 2451/2983 (82%), Gaps = 108/2983 (4%) Strand=Plus/Plus Query 38 cttcttcttctcctcctcctcctcctccACATTTCTCATTCCTTCACCG-TAGCTAAACC 96 ||| |||||||||| || | || ||||||||||||||| ||||||||| ||| ||| Sbjct 76 CTTTTTCTTCTCCTTCTTTTTCTTCTCCACATTTCTCATACCTTCACCGCAAGC-CGACC 134 Query 97 AATCACCGAGCTCAACGCTCTTCTCTCACTCAAATCCTCCCTCACCATCGAC---GA--A 151 |||| ||||| || ||||| |||||||||||| |||| |||||| || | || | Sbjct 135 AATCTCCGAGTTCCGTGCTCTCCTCTCACTCAAAACCTCTCTCACCGGCGCCGGAGATGA 194 Query 152 C----ACTCACCTCTCACCTCATGGAACCTTTCAACAACCTTCTGTTCATGGACCGGTGT 207 | |||| |||||| | || ||||| | ||||||| ||||||| |||||| ||||| Sbjct 195 CAAAAACTCGCCTCTCTCTTCCTGGAAAGTCTCAACAAGCTTCTGTACATGGATTGGTGT 254 Query 208 CACGTGCGACGtctctcgccggcacgtgacctctctcgacctctctggtcttaacctctc 267 ||||||||| || |||||||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct 255 CACGTGCGATGTATCTCGCCGTCACGTGACTTCTCTTGATCTCTCCGGTCTCAACCTCTC 314 Query 268 cggaactctctcctcC-GACGTAGCTCATTTACCTC-TCTTACAGAATCTATCACTCGCT 325 ||| ||||| ||| || || || ||||||||| || |||| |||||||||||||||||| Sbjct 315 CGGTACTCTTTCC-CCAGATGTTTCTCATTTACGTCTTCTT-CAGAATCTATCACTCGCT 372 Query 326 GCTAATC-AGATCTCAGGTCCTATTCCGCCGGAAATCTCCAATCTTTACGAG-CTTCGTC 383 | |||| | ||||| ||||| ||||||||||||||||| | |||| || | ||||||| Sbjct 373 GAAAATCTA-ATCTCCGGTCCGATTCCGCCGGAAATCTCGAGCCTTTCCG-GTCTTCGTC 430 Query 384 ATC-TCAATCTCTCCAATAATGGCTTCAACGGTTCATATCCCGATGA-ACTCTCCTCTGG 441 | | | |||||||| || |||| |||||||||||| | ||||||||| | | || ||||| Sbjct 431 A-CTTAAATCTCTCGAACAATGTCTTCAACGGTTCGTTTCCCGATGAGA-TTTCTTCTGG 488 Query 442 ATTGGTGAATCTCCGTGTTCTCGATTTGTATAACAACAACT-TAACCGGAGATTTACCGG 500 ||||||||||||||| ||||| ||| | || |||||||| | |||||||||||||||||| Sbjct 489 ATTGGTGAATCTCCGAGTTCTTGATGTCTACAACAACAA-TCTAACCGGAGATTTACCGG 547 Query 501 TTTCAATCACTAATCTGACTCAGCTCCGGCATCTTCACCTCGGTGGGAATTACTTCTCCG 560 |||| |||| |||||||||||||||||||| |||||||||||||| || |||||| | | Sbjct 548 TTTCCGTCACCAATCTGACTCAGCTCCGGCACCTTCACCTCGGTGGTAACTACTTCGCTG 607 Query 561 GTAAA-ATCCCGGCGACGTACGGAACCTGGCCTGTTCTCGAGTATCTAGCGGTTTCCGGT 619 | ||| |||||| | ||||||||| |||||| ||| | |||||||||||||||||||| Sbjct 608 G-AAAGATCCCGCCTTCGTACGGAAGCTGGCCAGTTATTGAGTATCTAGCGGTTTCCGGC 666 Query 620 AACGAGCTAATCGGTAAAATCCCTCCGGAGATCGGAAACCTAACGACTCTTCGTGAACTT 679 |||||||| |||| ||||||||||| ||||||||||||||||||||||| || || ||| Sbjct 667 AACGAGCTTGTCGGGAAAATCCCTCCAGAGATCGGAAACCTAACGACTCTCCGGGAGCTT 726 Query 680 TACATCGGATATTACAACGCTTTTGAAGATGGTCTTCCACCGGAGATTGGAAATTTGTCG 739 |||||||| || ||||||||||| ||||| |||||||| || ||||| |||||| | ||| Sbjct 727 TACATCGGCTACTACAACGCTTTCGAAGACGGTCTTCCTCCAGAGATCGGAAATCTATCG 786 Query 740 GAGCTTGTTC-GGTTCGACGCTGCTAATTGTGGTTTAACCGGTGAGATTCCACCGGAGAT 798 ||||| | || | ||||||| |||||||| || ||||||||||||||||| |||||||| Sbjct 787 GAGCTAG-TCAGATTCGACGGAGCTAATTGCGGATTAACCGGTGAGATTCCGCCGGAGAT 845 Query 799 TGGGAAGCTTCAGAAGCTAGATACGTTGTTTCTT-CAAGTAAATG-CGTTTTCAGGGACA 856 ||||||||||||||| || |||||| | |||||| ||||| |||| | || || || || Sbjct 846 TGGGAAGCTTCAGAAACTCGATACGCT-TTTCTTGCAAGTGAATGTC-TTCTCCGGTCCA 903 Query 857 TTAACTTCAGAGCTGGGATTTATCTCAAGCTTGAAATCAATGGATTTGTCTAACAATATG 916 ||||||| ||||| ||| | || || || ||||||||||||||||||||||| ||| Sbjct 904 TTAACTTGGGAGCTAGGAACGCTATCGAGTTTAAAATCAATGGATTTGTCTAACAACATG 963 Query 917 TTTACCGGTGAGATTCCGGCGAGTTTTTCACAGCTGAAGAACT-TAACG-TTGTTGAATC 974 || ||||| |||||||| |||||||| || || ||||||| | | ||| || ||||||| Sbjct 964 TTCACCGGAGAGATTCCAGCGAGTTTCGCAGAGTTGAAGAA-TCTCACGCTT-TTGAATC 1021 Query 975 TCTTCAGGAACAAGCTAT-ACGGTG-GTATACCTGAGTTCATCGGTGAAATGCCGGAGCT 1032 ||||| | ||||| || | |||| | | ||||| ||||||||||| || |||||||||| Sbjct 1022 TCTTCCGTAACAAACT-TCACGGCGAG-ATACCGGAGTTCATCGGAGATTTGCCGGAGCT 1079 Query 1033 AGAAGTGTTACAGCTTTGGGAGAACAATTTCACCGGTGGTATTCCTCAGAAATTGGGGGA 1092 ||||||||||||||||||||||||||||||||||| | || || |||||||| || || Sbjct 1080 TGAAGTGTTACAGCTTTGGGAGAACAATTTCACCGGAAGCATCCCGCAGAAATTAGGAGA 1139 Query 1093 AAATGGTAGATTAGTGAT-TCTT-GACCTCTCTTCAAACAAACTCACCGGCACTTTGCCG 1150 ||| |||| | || || || | || |||||||| || || || ||||| ||||| ||| Sbjct 1140 AAACGGTAAACTAA--ATCTCGTCGATCTCTCTTCCAATAAGCTGACCGGAACTTTACCG 1197 Query 1151 CCGAATATGTGCTCCGGTAACCGGTTA-ATGACATTAATCACTCTCGGTAACTT-CTTGT 1208 ||||| ||||||||||||||| |||| | || ||||||||||| || ||||| || | Sbjct 1198 CCGAACATGTGCTCCGGTAACAAGTTAGAA-ACTTTAATCACTCTTGGAAACTTTCTC-T 1255 Query 1209 TTGGTTCAATCCCGGATTCGCTTGGCAAATGTGAGTCTCTGACCCGGATCCGAATGGGTG 1268 ||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||||| Sbjct 1256 TTGGTTCAATCCCTGATTCTCTTGGTAAATGTGAGTCTTTGACCCGGATCCGAATGGGTG 1315 Query 1269 AGAATTTTCTCAACGGGTCGATTCCAAAGGGGCTTTTCGGGTTACCCAAATTATCTCAAG 1328 ||||||| || |||||||| || ||||| || || ||||| |||||||||||| |||||| Sbjct 1316 AGAATTTCCTGAACGGGTCAATCCCAAAAGGACTATTCGGATTACCCAAATTAACTCAAG 1375 Query 1329 TGGAGCTTCAAGATAATTACCTCACCGGAGAGTTACC-GATAAGC-GGAGGGGGAGTCTC 1386 ||||||| ||||||||||| ||| ||||||||||||| | | || ||||| | |||| Sbjct 1376 TGGAGCTCCAAGATAATTATCTCTCCGGAGAGTTACCAG-TC-GCCGGAGGTG---TCTC 1430 Query 1387 TGGTGACCTTGGTCAGATTAGTCTGTCTAATAACCAGCTCTCTGGTCCATTACCTGCTGC 1446 || | | ||||||||||| ||| | || || ||||||||||| |||||||||||| | || Sbjct 1431 TGTTAATCTTGGTCAGATCAGTTTATCAAACAACCAGCTCTCAGGTCCATTACCTCCGGC 1490 Query 1447 TATTGGAAACTTCTCCGGTGTTCAAAAACTACTCCTTGATGGTAACAAGTTTGCT-GGTC 1505 || || |||||| |||| ||||| ||||| || |||||||| |||||||| | |||| Sbjct 1491 GATCGGGAACTTCACCGGCGTTCAGAAACTTCTTCTTGATGGAAACAAGTTC-CAAGGTC 1549 Query 1506 CCATTCCACCGGAGATTGGGAGGCTTCAGCAGCTATCTAAG-TTGGATTTTAGCCATAAT 1564 | ||||| | ||| | |||| |||||||||||| || ||| ||| |||| ||||| || Sbjct 1550 CTATTCCTTCAGAGGTAGGGAAGCTTCAGCAGCTCTCGAAGATTG-ATTTCAGCCACAA- 1607 Query 1565 CT-GTTTTCGGGTCGGATCGCACCGGAGATCAGTCGTTGTAAGCTGCT-AACGTTTGTTG 1622 || ||| || ||||| ||||| |||||||| |||||||| ||||| || ||||||||||| Sbjct 1608 CTTGTTCTCCGGTCGAATCGCGCCGGAGATTAGTCGTTGCAAGCT-CTTAACGTTTGTTG 1666 Query 1623 ATCTGAGTC-GTAATGAGCTCTCAGGTGATATTCCTAAA-GAAATCACTGGTATGAGGAT 1680 ||||||| | | || |||||||| ||||| || || ||| || ||||||| ||||| ||| Sbjct 1667 ATCTGAG-CAGAAACGAGCTCTCCGGTGAAATCCC-AAATGAGATCACTGCTATGAAGAT 1724 Query 1681 CTTGAATTACTTGAATCTTTCAAGAAACCATCTCGTTGGTTCGATACCTG-TGACGATAG 1739 |||||||||||||| || || ||||||||||| ||||| || || |||| | | || Sbjct 1725 ATTGAATTACTTGAACCTGTCGAGAAACCATCTGGTTGGATCAATCCCTGGTT-CAATCT 1783 Query 1740 CATCAATGCAGAGTTTGACATCAGTTGATTTCTCTTACAACAATCTCTCTGGTCTAGTTC 1799 | ||||||||||| || ||||| ||||||||||||||||||| ||||| ||| |||||| Sbjct 1784 CGTCAATGCAGAGCTTAACATCTCTTGATTTCTCTTACAACAACCTCTCCGGTTTAGTTC 1843 Query 1800 CGAGCACTGGACAGTTTAGTTACTTCAATTACACATCGTTTTTGGGTAATTCTGATCTTT 1859 || | || ||||| || ||||||||||| ||||||||||| ||||||||| ||||||| | Sbjct 1844 CGGGAACAGGACAATTCAGTTACTTCAACTACACATCGTTCTTGGGTAATCCTGATCTCT 1903 Query 1860 GTGGTCCTTAT-TTGGGTCCTTG------CGGA------AAAGGAACTCACCAGCCTCAT 1906 ||||||||||| |||| |||||| ||| |||||| ||||||| |||| Sbjct 1904 GTGGTCCTTATCTTGG-TCCTTGTAAAGACGGTGTTGCTAAAGGAGGTCACCAGAGTCAT 1962 Query 1907 -GTTAAG--CCTTTATCTGCTACTACAAAACTGTTACTCGTCCTCGGATTGCTCT-TTTG 1962 || ||| |||||||| ||| ||| || | || || || || ||| | || | |||| Sbjct 1963 AGTAAAGGACCTTTATCAGCTTCTATGAAGTTATTGCTTGTTCTTGGACTACT-TGTTTG 2021 Query 1963 TTCGATGGTGTTTGCCATAGTGGCCATTACCAAAGCTCGGTCCTTGAGAAATGCGAGTGA 2022 |||||| | ||| || |||| ||||| | ||||||| | || |||| ||| |||||||| Sbjct 2022 TTCGATTGCGTTCGCGGTAGTAGCCATAATCAAAGCTAGATCATTGAAAAAGGCGAGTGA 2081 Query 2023 AGCCAAGG-CATGGAGATTGACTGCTTTCCAGAGACTAGACTTCACTTGTGACGATGTCT 2081 | || || | ||||| || || ||||||||||||||||||||||| ||||||||||||| Sbjct 2082 -GTCACGGGCTTGGAGGTTAACAGCTTTCCAGAGACTAGACTTCACGTGTGACGATGTCT 2140 Query 2082 TGGACTCTCTCAAGGAAGACAACATCATCGGTAAAGGCGGTGCCGGGATTGTCTACAAAG 2141 |||| |||||||| ||||||||||| || || ||||| || || || |||||||| |||| Sbjct 2141 TGGATTCTCTCAAAGAAGACAACATTATAGGCAAAGGAGGAGCTGGTATTGTCTATAAAG 2200 Query 2142 GCATTATGCCTAACGGCGATCTAGTCGCGGTCAAGAGATTGGCTACAATGTCCCATGGAT 2201 || | |||||||| || |||||||||||||| || ||| | ||| ||||||| | ||||| Sbjct 2201 GCGTAATGCCTAATGGTGATCTAGTCGCGGTTAAAAGACTCGCTGCAATGTCTCGTGGAT 2260 Query 2202 CTTCCCATGATCACGGGTTCAACGCCGAGATTCAAACGCT-AGGTAGAATCAGACACAGA 2260 |||||||||||||||| |||||||| ||||||||||| || ||| || || ||||||||| Sbjct 2261 CTTCCCATGATCACGGCTTCAACGCAGAGATTCAAAC-CTTAGGAAGGATAAGACACAGA 2319 Query 2261 CACATCGTGAGACTGCTCGGGTTTTGCTCCAACCACGAAACGAATCTCCTAGTGTACGAG 2320 ||||| ||||| || ||||| |||||||| |||||||| |||||||| || || || ||| Sbjct 2320 CACATAGTGAGGCTTCTCGGATTTTGCTCAAACCACGAGACGAATCTACTTGTCTATGAG 2379 Query 2321 TACATGCCTAATGGTAGCCTTGGAGAGGTTCTTCATGGAAAGAAAGGAGGTCATTTACAT 2380 ||||||||||||||||| || || ||||| ||||| || ||||||||||| || || ||| Sbjct 2380 TACATGCCTAATGGTAGTCTCGGTGAGGTGCTTCACGGTAAGAAAGGAGGACACTTGCAT 2439 Query 2381 TGGGACACACGTTATAAGATTGCTCTTGAAGCAGCCAAGGGTCTTTGCTATCTCCACCAC 2440 |||||||||||||| ||||||||||||||||| || || || || || || || || ||| Sbjct 2440 TGGGACACACGTTACAAGATTGCTCTTGAAGCTGCTAAAGGACTCTGTTACCTTCATCAC 2499 Query 2441 GATTGTTCCCCGTTGATCGTTCATAGAGATGTTAAATCCAACAATATCCTCCTCGATTCC 2500 |||||||| || ||||||||||| |||||||| ||||| ||||| |||||||| ||||| Sbjct 2500 GATTGTTCTCCATTGATCGTTCACAGAGATGTCAAATCAAACAACATCCTCCTTGATTCA 2559 Query 2501 AACTTTGAAGCTCATGTCGCCGATTTTGGCCTCGCCAAATTCCTCCAAGATTCTGGTACT 2560 ||||||||||||||||| || || ||||| ||||| |||||||| |||||||| |||||| Sbjct 2560 AACTTTGAAGCTCATGTTGCTGACTTTGGTCTCGCTAAATTCCTTCAAGATTCCGGTACT 2619 Query 2561 TCTGAATGTATGTCCGCCATCGCCGGCTCTTACGGCTACATAGCTCCAGAGTACGCGTAT 2620 |||||||||||||| || ||||| ||||||||||||||||||||||||||||| |||||| Sbjct 2620 TCTGAATGTATGTCTGCAATCGCTGGCTCTTACGGCTACATAGCTCCAGAGTATGCGTAT 2679 Query 2621 ACATTGAAGGTAGATGAGAAGAGTGATGTGTATAGTTTCGGTGTTGTTCTTCTAGAACTC 2680 || |||||||||||||||||||| |||||||||||||||||||| |||||| | |||||| Sbjct 2680 ACGTTGAAGGTAGATGAGAAGAGCGATGTGTATAGTTTCGGTGTGGTTCTTTTGGAACTC 2739 Query 2681 ATCACCGGGAA-AAAACCCGTCGGAGAATTTGGTGACGGCGTTGATATCGTTCAATGGGT 2739 ||||||| || |||||| |||||||||||||| ||||| || ||||| || |||||||| Sbjct 2740 GTCACCGG-AAGAAAACCTGTCGGAGAATTTGGAGACGGTGTCGATATAGTGCAATGGGT 2798 Query 2740 TAG-AAGCATGACGGATTCAAATAAAGATT-GTGTGCTCAAAGTAATTG-ATCTTAGACT 2796 | | || ||||| ||||| || || |||| | || || |||||| ||| ||| ||||| Sbjct 2799 TCGTAAA-ATGACTGATTCGAACAAGGATTCG-GTTCTGAAAGTA-TTGGATCCGAGACT 2855 Query 2797 CTCTTCTG-TACC-AGTTCACGAAGTAACACACGTCTTCTACGTTGCGTTGCTCTGCGTT 2854 ||||| | | || | |||| ||||| || ||||||||||| || ||| ||||||| || Sbjct 2856 TTCTTC-GATTCCGA-TTCATGAAGTGACGCACGTCTTCTATGTAGCGATGCTCTGTGTA 2913 Query 2855 GAAGAACAAGCGGTGGAGAGGCCGACGATGCGTGAAGTCGTTCAGATTCTCACTGAGATC 2914 ||||||||||| || ||||||||||| ||| | ||||| ||||||||||||||||||||| Sbjct 2914 GAAGAACAAGCTGTTGAGAGGCCGACTATGAGAGAAGTTGTTCAGATTCTCACTGAGATC 2973 Query 2915 CCAAAGATCCCTCTTTCGAAGCAGCAGGCG--G-CGGAATCAG 2954 || ||| | || | |||||| | ||| || | ||||||||| Sbjct 2974 CCGAAGTTGCCACCGTCGAAGGATCAGCCGATGACGGAATCAG 3016 > AT3G49668.1 | Symbols: | other RNA | chr3:18417565-18418278 REVERSE LENGTH=549 Length=549 Score = 673 bits (364), Expect = 0.0 Identities = 415/439 (95%), Gaps = 5/439 (1%) Strand=Plus/Minus Query 126 TCAAATCCTCCCTCACCATCGACGAACACTCACCTCT-C--ACCTCATGGAACCTTTCAA 182 ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 438 TCAAATCCTCCTTCACCATCGACGAACACTCACCTCTCCTGACCTCATGGAACCTTTCAA 379 Query 183 CAACCTTCTGTTCATGGACCGGTGTCACGTGCGACGtctctcgccggcacgtgacctctc 242 |||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 378 CAACTTTCTGTTCATGGACCGGTGTCACGTGCGACGTCTCTCTCCGTCACGTGACCTCTC 319 Query 243 tcgacctctctggtcttaacctctccggaactctctcctcCGACGTAGCTCATTTACCTC 302 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 318 TCGACCTCTCAGGTCTTAACCTCTCCGGAACTCTCTCCTCCGACGTAGCTCATTTACCTC 259 Query 303 T-CTTACAGAATCTATCACTCGCTGCTAATCAGATCTCAGGTCCTATTCCGCCGGAAATC 361 | | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 258 TGC-TACAGAATCTATCACTCGCTGCTAATCAGATCTCAGGTCCTATTCCGCCGCAAATC 200 Query 362 TCCAATCTTTACGAGCTTCGTCATCTCAATCTCTCCAATAATGGCTTCAACGGTTCATAT 421 |||||||| || ||||||||||| ||||||||||||||||||| |||||||||||||| | Sbjct 199 TCCAATCTCTATGAGCTTCGTCACCTCAATCTCTCCAATAATGTCTTCAACGGTTCATTT 140 Query 422 CCCGATGAACTCTCCTCTGGATTGGTGAATCTCCGTGTTCTCGATTTGTATAACAACAAC 481 ||||||||||||||||||||||||||||||||||||||||| || || || |||||||| Sbjct 139 CCCGATGAACTCTCCTCTGGATTGGTGAATCTCCGTGTTCTTGACTTATACAACAACAAT 80 Query 482 TTAACCGGAGATTTACCGGTTTCAATCACTAATCTGACTCAGCTCCGGCATCTTCACCTC 541 |||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| Sbjct 79 TTAACCGGAGATTTACCGGTTTCACTCACTAATCTCACTCAGCTCCGTCATCTTCACCTC 20 Query 542 GGTGGGAATTACTTCTCCG 560 ||||||||||||||||||| Sbjct 19 GGTGGGAATTACTTCTCCG 1 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 151704835632 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5