BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg938186
Length=1119
Score E
Sequences producing significant alignments: (Bits) Value
AT3G52930.1 | Symbols: | Aldolase superfamily protein | chr3:1... 1831 0.0
AT2G36460.1 | Symbols: | Aldolase superfamily protein | chr2:1... 1070 0.0
> AT3G52930.1 | Symbols: | Aldolase superfamily protein | chr3:19626748-19629073
REVERSE LENGTH=1911
Length=1911
Score = 1831 bits (991), Expect = 0.0
Identities = 1071/1110 (96%), Gaps = 4/1110 (0%)
Strand=Plus/Plus
Query 1 TCTCGATCTCTCCGTCTAAAC-ATGTCTGCCTTCACCAGCAAATTCGCCGATGAGTTGAT 59
|||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||
Sbjct 179 TCTCGATCTCTCCGTC-CAACTATGTCTGCCTTCACAAGCAAATTCGCCGATGAGTTGAT 237
Query 60 CGCCAACGCTGCCTACATCGGCACACCTGGAAAAGGTATTTTGGCTGCTGATGAGTCCAC 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 238 CGCCAACGCTGCCTACATCGGCACACCTGGAAAAGGTATTTTGGCTGCTGATGAGTCCAC 297
Query 120 TGGTACCATCGGAAAGCGTCTAGCTAGCATCAACGTTGAGAACGTTGAGACCAACAGACG 179
||||||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct 298 TGGTACCATTGGAAAGCGTCTTGCGAGCATCAACGTCGAGAACGTTGAGACCAACAGACG 357
Query 180 TATCCTCCGTGAGCTTCTTTTCACCGCCCCTGGTGCTCTTCCTTGCCTTAGTGGTGTCAT 239
|| ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||
Sbjct 358 TAACCTCCGTGAGCTTCTCTTCACCGCCCCTGGTGCTCTTCCATGCCTCAGTGGTGTCAT 417
Query 240 CCTTTTCGAAGAGACTCTTTACCAAAAGAGTTCCGATGGCAAGCTTTTTGTTGATATCTT 299
|||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||
Sbjct 418 CCTTTTCGAAGAGACTCTGTACCAAAAGAGTTCCGATGGTAAGCTTTTCGTTGATATCTT 477
Query 300 GAAGGAAGGAGGAGTTCTTCCCGGTATCAAGGTTGACAAGGGTACCATTGAGCTAGCTGG 359
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 478 GAAGGAAGGAGGAGTTCTTCCCGGTATCAAGGTTGACAAGGGTACCGTTGAGCTAGCTGG 537
Query 360 AACCAACGGTGAGACCACCACTCAAGGTCTTGACGGTCTTGGTGACCGATGCAAGAAGTA 419
|||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 538 AACCGACGGTGAGACCACCACTCAAGGTCTTGACGGTCTCGGTGACAGATGCAAGAAGTA 597
Query 420 CTACGAAGCTGGTGCTCGTTTCGCCAAGTGGCGTGCAGTCCTCAAGATCGGCGAGAACGA 479
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 598 CTACGAAGCTGGTGCTCGTTTCGCCAAGTGGCGTGCAGTCCTCAAGATCGGAGAGAACGA 657
Query 480 GCCATCTGAGCTA-TCCATCCATGAGAACGCTTACGGATTAGCTAGATACGCTGTTATCT 538
||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 658 GCCATCTGAGC-ATTCCATTCATGAGAACGCTTACGGATTAGCTAGATACGCTGTTATCT 716
Query 539 GCCAAGAGAACGGTCTTGTACCCATTGTTGAGCCTGAGATCCTAGTTGATGGATCCCATG 598
|||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct 717 GCCAAGAGAACGGTCTTGTACCAATTGTCGAGCCTGAGATCCTAGTCGATGGATCCCATG 776
Query 599 ACATCCAGAAGTGTGCTGCTGTGACTGAGCGTGTTCTTGCAGCTTGCTACAAGGCTCTTA 658
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 777 ACATCCAGAAGTGTGCTGCCGTGACTGAGCGTGTCCTTGCAGCTTGCTACAAGGCTCTTA 836
Query 659 GCGACCACCACGTCTTGCTCGAGGGTACCCTCTTGAAGCCTAACATGGTGACACCCGGAT 718
|||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||
Sbjct 837 GCGACCACCACGTCTTGCTCGAGGGTACACTCTTGAAGCCTAACATGGTTACTCCCGGAT 896
Query 719 CAGACAGCCCCAAGGTTTCACCTGAAGTCATCGCTGAGCACACCGTCCGTGCCCTTCAGA 778
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 897 CTGACAGCCCCAAGGTTTCACCTGAAGTCATCGCTGAGCACACCGTCCGTGCCCTTCAGA 956
Query 779 GAACCGTCCCAGCAGCTGTTCCAGCCATTGTCTTCTTATCCGGTGGACAGAGTGAGGAAG 838
|||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||
Sbjct 957 GAACCGTCCCAGCAGCTGTTCCAGCCATTGTCTTCTTATCTGGAGGACAGAGCGAGGAAG 1016
Query 839 AAGCTACAAGGAACTTGAACGCCATGAACCAGTTGAAGACCAAGAAGCCATGGTCATTGT 898
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 AAGCTACCAGGAACTTGAACGCCATGAACCAGTTGAAGACCAAGAAGCCATGGTCATTGT 1076
Query 899 CTTTCTCATTCGGACGTGCGTTGCAGCAGTCTACCTTGAAGACATGGGCAGGCAAAGAGG 958
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1077 CTTTCTCATTCGGACGTGCGTTGCAGCAGTCTACCTTGAAGACATGGGCAGGTAAAGAGG 1136
Query 959 AGAATGTCAAGGCAGCTCAAGAGGCGTTGTATGTGAGGTGCAAGGCCAACTCTGAAGCCA 1018
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1137 AGAATGTCAAGGCAGCTCAAGAGGCGTTGTATGTGAGGTGCAAGGCTAACTCTGAAGCCA 1196
Query 1019 CACTCGGAACCTACAAGGGTGACGCTAAGCTTGGTGATGGAGCAGCTGAGAGCCTTCACG 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 CACTCGGAACCTACAAGGGTGACGCTAAGCTTGGTGATGGAGCAGCTGAGAGCCTTCACG 1256
Query 1079 TGAAAGATTACAAGTACTGAGCATCGTCCA 1108
|||| |||||||||||||||||||||||||
Sbjct 1257 TGAAGGATTACAAGTACTGAGCATCGTCCA 1286
> AT2G36460.1 | Symbols: | Aldolase superfamily protein | chr2:15296701-15298514
REVERSE LENGTH=1432
Length=1432
Score = 1070 bits (579), Expect = 0.0
Identities = 936/1108 (84%), Gaps = 26/1108 (2%)
Strand=Plus/Plus
Query 3 TCGATCTCTCCGTCTAAACATGTCTGCCTTCACCAGCAAATTCGCCGATGAGTTGATCGC 62
||||| ||| | || || ||||||| |||||||| |||||||||||||||| |||| ||
Sbjct 111 TCGAT-TCTTCTTC-AACCATGTCTTCCTTCACCTCCAAATTCGCCGATGAGCTGATTGC 168
Query 63 CAACGCTGCCTACATCGGCACACCTGGAAAAGGTAT-TTTGGCTGCTGATGAGTCCACTG 121
|||||||| |||||||| ||||||||||||||||| || || || ||||| || ||||
Sbjct 169 TAACGCTGCTTACATCGGAACACCTGGAAAAGGTATCCTT-GCGGCAGATGAATCAACTG 227
Query 122 GTACCA-TCGGAAAGCGTCTAGCTAGCATCAACGTTGAGAACGTTGAGA-CCAACAGACG 179
|||| | | ||||| ||||| |||||||||||||||||||||||||| | ||||||||||
Sbjct 228 GTACTATTGGGAAA-CGTCTCGCTAGCATCAACGTTGAGAACGTTGA-ATCCAACAGACG 285
Query 180 TATC-CTCCGTGAGCTTCTTTTCACCGCCCCTGGTGCTCTTCCTTGCCTTAGTGGTGTCA 238
| | || ||||||||||| ||||| | ||||| |||||||||||||| |||||||| |
Sbjct 286 T-GCTCTTCGTGAGCTTCTCTTCACTACTCCTGGAGCTCTTCCTTGCCTCAGTGGTGTTA 344
Query 239 TCCT-TTTCGAAGAGACTCTTTACCAAAAGAGTTCCGATGGCAAGCTTTTTGTTGATATC 297
|||| ||| ||||| ||||||||||| ||||| || ||||| | || ||||||||||||
Sbjct 345 TCCTCTTT-GAAGAAACTCTTTACCAGAAGAGCTCTGATGGTACGCCTTTTGTTGATATG 403
Query 298 TTGAAGGAAG-G-AGGAGTTCTT-CCCGGTATCAAGGTTGACAAGGGTACCATTGAGCTA 354
||||| | || | ||||||| || || ||||| |||||||| ||||||||| |||||||
Sbjct 404 TTGAA-G-AGTGCAGGAGTT-TTGCCTGGTATTAAGGTTGATAAGGGTACCGTTGAGCTT 460
Query 355 GCTGGAACCAACGGTGAGACCACCACTCAAGGTCTTGACGGTCTTGGTGACCGATGCAAG 414
||||||||||| |||||||| || |||||||||||||| |||||||||||||| ||||||
Sbjct 461 GCTGGAACCAATGGTGAGACTACTACTCAAGGTCTTGATGGTCTTGGTGACCGTTGCAAG 520
Query 415 AAGTACTACGAAGCTGGTGCTCGTTTCGCCAAGTGGCGTGCAGTCCTCAAGATCGGCGAG 474
|| |||||||| ||||||||||||||||||||||||||||| || || ||||| || |
Sbjct 521 AAATACTACGAGGCTGGTGCTCGTTTCGCCAAGTGGCGTGCGGTTCTTAAGATTGGTGTT 580
Query 475 AACGAGCCATCTGAGCTATCCATCCATGAGAACGCTTACGGATTAGCTAGATACGCTGTT 534
|| ||||||||| || || | ||||||||||||||||| ||||| ||||| || |||||
Sbjct 581 AATGAGCCATCTCAGTTAGCTATCCATGAGAACGCTTATGGATTGGCTAGGTATGCTGTC 640
Query 535 ATCTGCCAAGAGAACGGTCTTGTACCCATTGTTGAGCCTGAGATCCTAGTTGATGGATCC 594
|| || || |||||||||||||| || ||||| ||||||||||| || |||||||| ||
Sbjct 641 ATTTGTCAGGAGAACGGTCTTGTGCCGATTGTGGAGCCTGAGATTCTTGTTGATGGCTCT 700
Query 595 CATGACATCCAGAAGTGTGCTGCTGTGACTGAGCGTGTTCTTGCAGCTTGCTACAAGGCT 654
|||||||| ||||||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct 701 CATGACATTCAGAAGTGTGCCGCGGTGACAGAGCGTGTTCTTGCAGCTTGCTACAAGGCT 760
Query 655 CTTAGCGACCACCACGTCTTGCTCGAGGGTACCCTCTTGAAGCCTAACATGGTGACACCC 714
|| || || ||||| |||||||| || || || |||||||| ||||||||||| || ||
Sbjct 761 CTGAGTGATCACCATGTCTTGCTAGAAGGAACACTCTTGAAACCTAACATGGTTACTCCA 820
Query 715 GGATCAGACAGCCCCAAGGTTTCACCTGAAGTCATCGCTGAGCACACCGTCCGTGCCCTT 774
|||||||| || | |||||| |||| || || || ||||||||||| |||||||| |||
Sbjct 821 GGATCAGAGAGTGCGAAGGTTGCACCAGAGGTGATTGCTGAGCACACTGTCCGTGCTCTT 880
Query 775 CAGAGAACCGTCCCAGCAGCTGTTCCAGCCATTGTCTTCTTATCCGGTGGACAGAGTGAG 834
||||| || || ||||| |||||||||||||| || ||||| || ||||||||||| |||
Sbjct 881 CAGAGGACAGTTCCAGCTGCTGTTCCAGCCATAGTGTTCTTGTCTGGTGGACAGAGCGAG 940
Query 835 GAAGAAGCTACAAGGAAC-TTGAACGCCATGAACCAGTTGAAGACCAAGAAGCCATGGTC 893
||||| || ||||| ||| || ||||| ||||||||||||||||| |||||||| |||||
Sbjct 941 GAAGAGGCGACAAGAAACCTT-AACGCGATGAACCAGTTGAAGACAAAGAAGCCTTGGTC 999
Query 894 ATTGTCTTTCTCATTCGGACGTGCGTTGCAGCAGT-CTACCTTGAAGACATGGGCAGGCA 952
||||||||||| || ||| | |||||||||||| | || |||||||| |||| ||| |
Sbjct 1000 GTTGTCTTTCTCCTTTGGAAGGGCGTTGCAGCAGAGC-ACTTTGAAGACTTGGGGAGGAA 1058
Query 953 AAGAGGAGAATGTCAAGGCAG-CTCAAGAGGCGTTGTATG-TGAGGTGCAAGGCCAACTC 1010
||||||||||||| ||| || ||||||| ||||| | || | || ||||| || |||||
Sbjct 1059 AAGAGGAGAATGTGAAGA-AGGCTCAAGAAGCGTTCT-TGGTCAGATGCAAAGCTAACTC 1116
Query 1011 TGAAGCCACACTCGGAACCTACAAGGGTGACGCTAAGCTTGGTGATGGAGCAGCTGAGAG 1070
|||||| ||||| || | ||||||||||| |||||||| ||||| || |||||||||||
Sbjct 1117 TGAAGCAACACTTGGTGCTTACAAGGGTGATGCTAAGCTCGGTGAAGGTGCAGCTGAGAG 1176
Query 1071 CCTTCACGTGAAAGATTACAAGTACTGA 1098
||||||||| || |||||||||||||||
Sbjct 1177 CCTTCACGTTAAGGATTACAAGTACTGA 1204
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54869195685
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5