BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg938442
Length=2231
Score E
Sequences producing significant alignments: (Bits) Value
AT3G55130.1 | Symbols: ATWBC19, WBC19 | white-brown complex hom... 3262 0.0
AT3G55110.1 | Symbols: | ABC-2 type transporter family protein... 1818 0.0
> AT3G55130.1 | Symbols: ATWBC19, WBC19 | white-brown complex homolog
19 | chr3:20433878-20436390 REVERSE LENGTH=2513
Length=2513
Score = 3262 bits (1766), Expect = 0.0
Identities = 2077/2226 (93%), Gaps = 26/2226 (1%)
Strand=Plus/Plus
Query 2 AAACCCTAAACGACGCCGTACGATGAATTTATCACTTAGCGGTAGAAAGATTGCCATGAC 61
|||| |||||||||||||| |||||||| ||||||| |||||||||||||||||||||||
Sbjct 81 AAACTCTAAACGACGCCGTCCGATGAATCTATCACTCAGCGGTAGAAAGATTGCCATGAC 140
Query 62 ACGTGTTTCGGCGGAAACTCAGTGTATCACTCCCATCGGATCACCAACGCTCGAAGAGTT 121
||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||
Sbjct 141 ACGTGTTTCGGCGGAAACTCAGTATATCACTCCCATCGGATCACCAACCCTCGACGAGTT 200
Query 122 GCTGAAAGACTGCGACAGTTTCCGCAAAGGAGATCCCGGCGACGGCGTAAAAAGCGACGA 181
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct 201 GCTGAAAGACTGCGACAGTTTCCGAAAAGGAGATTCCGGCGACGGCGTAAAAAGCGACGA 260
Query 182 TCCGGCTCATCACATAATAGATGTTGAAGCCTTGTACGTAAAACCTGTTCCGTACGTCTT 241
||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 261 TCCTGCACATCACATAATAGATGTCGAAGCCTTGTACGTAAAACCTGTCCCGTACGTCTT 320
Query 242 AGCCTTTAACAATCTTGAATACGATGTTATACTACGACGTCGTTTTGATTTCTCCCGGCG 301
| ||||||||||||| |||||||||| | ||| || || || |||| ||||| ||||
Sbjct 321 AAACTTTAACAATCTTCAATACGATGTCACACTTCGCCGGCGGTTTGGCTTCTCACGGC- 379
Query 302 AAGAAGCTCCGCTTCAGTGAAGACTCTACTCGGTGGTGTTTCCGGCGAGGCTTGTGACGG 361
|| || || ||| ||||||||||||| || ||||||||| ||||||| ||||||
Sbjct 380 AA-AA----CG---GAGTAAAGACTCTACTCGATGATGTTTCCGGAGAGGCTTCTGACGG 431
Query 362 CGATATCCTCGCCGTTCTTGGTGCAAGTGGAGCAGGGAAATCAACGTTGATCGATGCATT 421
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
Sbjct 432 CGATATCCTCGCCGTTCTCGGTGCAAGTGGAGCAGGAAAATCAACGTTGATCGATGCACT 491
Query 422 AGCGGGGAGAGTTGCGGAGGGAAGCTTGAGAGGCACGGTAACTCTAAACGGAGAGAAAGT 481
||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||
Sbjct 492 AGCGGGGAGAGTTGCTGAGGGAAGCTTGAGAGGCTCTGTAACTCTAAACGGAGAGAAAGT 551
Query 482 TTTGCAATCTCGATTGTTGAAAGTGATCTCGGCGTATGTGATGCAAGACGATCTTCTTTT 541
|||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct 552 TTTGCAATCTCGATTGTTGAAAGTTATATCGGCGTATGTTATGCAAGACGATCTTCTTTT 611
Query 542 CCCGATGCTCACCGTGAAAGAAACCCTAATGTTCGCTTCCGAGTTTCGTCTCCCGAGAAG 601
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 612 TCCGATGCTCACCGTTAAAGAAACCCTAATGTTCGCTTCCGAGTTTCGTCTCCCGAGAAG 671
Query 602 TTTGTCTAAGTCGAAGAAGATGGAGCGTGTTGCAGCCCTCATTGATCAATTAGGGTTAAG 661
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 672 TTTGTCTAAGTCGAAGAAGATGGAGCGTGTTGAAGCCCTAATTGATCAATTAGGGTTAAG 731
Query 662 AAACGCGGCGAACACGGTAATCGGAGACGAAGGACACCGTGGAGTCTCTGGAGGAGAGAG 721
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 732 AAACGCGGCGAACACGGTAATCGGAGACGAAGGACACCGTGGAGTTTCTGGAGGAGAGAG 791
Query 722 ACGGCGTGTTTCAATAGGAATCGATATTATCCACGATCCTATCGTCCTGTTTCTTGACGA 781
|||||| |||||||| |||||||||||||| ||||||||||||||| |||| || |||||
Sbjct 792 ACGGCGCGTTTCAATCGGAATCGATATTATACACGATCCTATCGTCTTGTTCCTCGACGA 851
Query 782 ACCAACGTCGGGATTGGATTCCACTAACGCGTTTATGGTGGTGCAAGTTTTGAAACGAAT 841
|||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 852 ACCAACGTCGGGGCTGGATTCTACAAACGCGTTTATGGTGGTGCAAGTTTTGAAACGAAT 911
Query 842 TGCTCAAAGTGGCAGTATCGTAATTATGTCGATCCATCAACCTAGTGCTCGAATAGTGGA 901
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 912 TGCTCAAAGTGGCAGTATCGTAATTATGTCGATCCATCAACCTAGTGCTCGAATCGTGGA 971
Query 902 GTTGCTTGATCGGCTTATCAT-CTTATCTCGTGGCAAAAGTGTGTTCAATGGATCTCCGG 960
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 972 GTTGCTTGATCGGCTTATCATTCT-ATCTCGTGGCAAAAGTGTGTTCAATGGATCTCCGG 1030
Query 961 CTAGTCTTCCCGGATTCTTCTCCGACTTCGGTCGACCGATCCCGGAGAAAGAGAACATCA 1020
| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 1031 CGAGTCTTCCCGGATTCTTCTCCGACTTCGGTCGTCCGATCCCGGAGAAAGAGAACAT-A 1089
Query 1021 -CAGAGTTCGCACTTGATTTAGTTCGAGAGCTCGAAGGATCCAATCAAGGAACTAAAGCT 1079
||||||||||||||||||||||||||||||| |||||||||||| |||| || ||||||
Sbjct 1090 TCAGAGTTCGCACTTGATTTAGTTCGAGAGCTTGAAGGATCCAATGAAGGTACGAAAGCT 1149
Query 1080 TTAGTAGACTTCAACGAAAAGTGGCAACAAAACAAGATCAGTCTCATCCAATCTGCTCCA 1139
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 1150 TTAGTAGACTTCAACGAAAAGTGGCAACAAAACAAGATCAGCCTGATCCAATCTGCTCCA 1209
Query 1140 CAAACCAATGAGCTCGAGCCA-GACCGCGCATTATCTTTAAAAGAAGCCATCAATGCAAG 1198
||||||||| ||||||| ||| ||||| |||||||||||||||||||||| ||||| ||
Sbjct 1210 CAAACCAATAAGCTCGA-CCAAGACCGTTCATTATCTTTAAAAGAAGCCATTAATGCGAG 1268
Query 1199 TGTTTCTAGAGGCAAACTAGTCTCAGGCTCATCTAGATCCAATCCCACTTCGATGGAAAC 1258
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1269 TGTTTCTAGAGGCAAACTAGTCTCAGGCTCATCTAGATCCAATCCCACTTCCATGGAAAC 1328
Query 1259 AGTATCTTCATACGCAAACCCGTCGTTGTTCGAAACATTCATCTTAGCCAAACGGTATAT 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1329 AGTATCTTCATACGCAAACCCGTCGTTGTTCGAAACATTCATCTTAGCCAAACGGTACAT 1388
Query 1319 GAAAAACTGGATCCGGATGCCCGAGCTAGTAGGAACGCGGATCGCTACCGTAATGGTGAC 1378
||||||||||||||||||||| |||||||||||||| |||| ||||| |||||||||||
Sbjct 1389 GAAAAACTGGATCCGGATGCCTGAGCTAGTAGGAACAAGGATTGCTACGGTAATGGTGAC 1448
Query 1379 TGGTTCTCTCTTAGCCACTGTTTATTGGAAGCTAGACCACACCCCAAGAGGAGCACAAGA 1438
||||| ||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1449 TGGTTGTCTTTTAGCAACTGTGTATTGGAAGCTAGACCACACTCCAAGAGGAGCACAAGA 1508
Query 1439 GAGATTGACCTTGTTCGCATTCGTCGTGCCCA-CAATGTTCTATTGTTGTTTAGACAATG 1497
||||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||||||
Sbjct 1509 GAGATTGACTTTGTTCGCATTTGTCGT-CCCAACAATGTTCTATTGTTGTTTAGACAATG 1567
Query 1498 TCCCCGTTTTTATCCAAGAACGATACATTTTCTTAAGAGAGACAACACACAATGCTTACA 1557
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 1568 TCCCCGTTTTTATCCAAGAACGATACATTTTCTTAAGAGAGACAACACACAACGCGTACA 1627
Query 1558 GAACATCTTCATATGTCATATCTCACTCTCTAGTGTCTCTTCCTCAGCT-CATTGCCCCT 1616
||||||||||||| |||||||| |||||||| ||||| || |||||||| | |||| |||
Sbjct 1628 GAACATCTTCATACGTCATATCACACTCTCTTGTGTCCCTGCCTCAGCTAC-TTGCACCT 1686
Query 1617 TCCTTAGTATTTTCCGCGATCACATTCTGGACGGTTGGATTGAGCGGCGGATTAGAGGGT 1676
||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1687 TCCTTGGTATTTTCCGCGATCACATTCTGGACCGTTGGATTGAGCGGGGGATTAGAGGGT 1746
Query 1677 TTCT-TCTTTTATTGCCTCCTGATCTATGCCTCCTTTTGGTCTGGATCTTCCGTTGTCAC 1735
|| | |||| ||||||||||| |||||||||||||||||||||||||||||||| || ||
Sbjct 1747 TT-TGTCTTCTATTGCCTCCTAATCTATGCCTCCTTTTGGTCTGGATCTTCCGTCGTTAC 1805
Query 1736 CTTCATATCAGGTGTTGTTCCGCATATCATGTTATGTTACATGGT-TGCCATTACCTATC 1794
||| ||||| |||||||||||| |||||||||||||||||||||| | ||||||||||||
Sbjct 1806 CTTTATATCCGGTGTTGTTCCGAATATCATGTTATGTTACATGGTCT-CCATTACCTATC 1864
Query 1795 TCGCCTACTGTTTACTGTTGAGTGGATTCTACGTCAACCGAGATCGAATACCGTTTTACT 1854
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1865 TCGCCTACTGTTTACTGTTGAGTGGATTCTACGTCAACCGAGATCGAATACCGTTTTATT 1924
Query 1855 GGACATGGTTTCATTATATTTCA-TTGCTCAAGTATCCCTATGAGGCAGTCTTGATCAAC 1913
|||| ||||||||||| |||||| || ||||||||||| |||||||| ||||| ||||||
Sbjct 1925 GGACGTGGTTTCATTACATTTCAATT-CTCAAGTATCCGTATGAGGCTGTCTTAATCAAC 1983
Query 1914 GAGTTTGATGACCCGTCTCGTTGTTTTGTTAAGGGAGTCCAGGTTTTCGACAGTACTCTT 1973
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 1984 GAGTTTGATGACCCGTCTCGTTGTTTTGTTAGGGGTGTCCAGGTTTTCGACAGTACTCTT 2043
Query 1974 CTCGGAGGAGTGTCTGATTCCGGGAAGGTTAAGCTTCTTGAAACTCTCAGTGATTCTCTG 2033
||||| ||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||
Sbjct 2044 CTCGGGGGAGTGTCTGACTCCGGGAAGGTTAAGCTCCTTGAAACTCTCAGTAAATCTCTG 2103
Query 2034 AGAACGAGGATAACGGAGTCCACATGCTTGAGGACTGGGTCTGACTTACTTGCACAGCAA 2093
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 2104 AGAACGAAGATAACGGAGTCCACATGCTTGAGGACGGGGTCTGACTTACTTGCACAACAG 2163
Query 2094 GGTATTACTCAATTGAACAAGTGGGATTGCTTGTGGATTACGTTTGCTTCGGGTCTCTTT 2153
|||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2164 GGTATTACGCAATTGAGCAAGTGGGATTGCTTGTGGATTACGTTTGCTTCAGGTCTCTTC 2223
Query 2154 TTTAGGATCTTATTTTACTTCGCCTTGCTGTTCGGGAGCAGGAATAAGAGGACGTGAAGG 2213
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct 2224 TTTAGGATCTTATTTTACTTCGCCTTGCTGTTTGGGAGCAGGAATAAGAGGACGTGA-GG 2282
Query 2214 TTACTA 2219
||||||
Sbjct 2283 TTACTA 2288
> AT3G55110.1 | Symbols: | ABC-2 type transporter family protein
| chr3:20424550-20427377 REVERSE LENGTH=2533
Length=2533
Score = 1818 bits (984), Expect = 0.0
Identities = 1681/2007 (84%), Gaps = 90/2007 (4%)
Strand=Plus/Plus
Query 238 TCTTAGCCTTTAACAATCTTGA-ATACGATGTTATACTACGACGTCGTTTTGATTTCTCC 296
||||| |||| ||||||| | | ||| ||||| |||| || || || ||||||||||||
Sbjct 375 TCTTATCCTTCAACAATC-TCAGTTACAATGTTGTACTTCGCCGGCGGTTTGATTTCTCC 433
Query 297 CGGCGAAGAAGCTCCGCTTCAGTGAAGACTCTACTCGGTGGTGTTTCCGGCGAGGCTTGT 356
||||| | ||| ||||||| ||||||||| |||||| || | || | ||||||||| ||
Sbjct 434 CGGCG-A-AAG-ACCGCTTCGGTGAAGACTTTACTCGATGATATTACAGGCGAGGCTCGT 490
Query 357 GACGGCGATATCCTCGCCGTTCTTGGTGCAAGTGGAGCAGGGAAATCAACGTTGATCGAT 416
||||| || ||||||||||||||||||| ||| ||||| || ||||| |||||||| ||
Sbjct 491 GACGGAGAAATCCTCGCCGTTCTTGGTGGAAGCGGAGCCGGAAAATCCACGTTGATAGAC 550
Query 417 GCATTAGCGGGGAGAGTTGCGGAGGGA-AGCTTGAGAGGCACGGTAACTCTAAACGGAGA 475
|||||||| || ||||| ||||| ||| ||||||| ||||||||||||||||||||||||
Sbjct 551 GCATTAGCCGGAAGAGTGGCGGA-GGATAGCTTGAAAGGCACGGTAACTCTAAACGGAGA 609
Query 476 GAAAGTTTTGCAATCTCGATTGTTGAAAGTGATCTCGGCGTATGTGATGCAAGACGATCT 535
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 610 AAAAGTTTTGCAATCTCGATTGTTGAAAGTGATATCGGCGTATGTGATGCAAGACGATCT 669
Query 536 TCTTTTCCCGATGCTCACCGTGAAAGAAACCCTAATGTTCGCTTCCGAGTTTCGTCTCCC 595
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 670 TCTTTTTCCGATGCTCACCGTTAAAGAAACCCTAATGTTCGCTTCCGAGTTTCGTCTCCC 729
Query 596 GAGAAGTTTGTCTAAGTCGAAGAAGATGGAGCGTGTTGCAGCCCTCATTGATCAATTAGG 655
|||||||||| |||| |||||||||||||||||||||| | |||| ||||| ||| ||||
Sbjct 730 GAGAAGTTTGCCTAAATCGAAGAAGATGGAGCGTGTTGAAACCCTAATTGACCAACTAGG 789
Query 656 G-TTAAGAAACGCGGCGAACACGGTAATCGGAGACGAAGGACACCGTGGAGTCTCTGGAG 714
| ||| ||||||||||| | |||||||||||||| |||||||| |||||||| ||||| |
Sbjct 790 GCTTA-GAAACGCGGCGGATACGGTAATCGGAGATGAAGGACATCGTGGAGTATCTGGCG 848
Query 715 GAGAGAGACGGCGTGTTTCAATAGGAATCGATATTATCCACGATCCTATCGTCCTGTTTC 774
||||| ||||||| || ||||| ||||| |||||||| |||||||||||| |||| || |
Sbjct 849 GAGAGCGACGGCGCGTGTCAATCGGAATTGATATTATACACGATCCTATCCTCCTCTTCC 908
Query 775 TTGACGAACCAACGTC-GGGATTGGATTCCACTAACGCGTTTATGGTGGTGCAAGTTTTG 833
| |||||||||||||| ||| || || ||||| || ||||||||||||||||| ||||||
Sbjct 909 TCGACGAACCAACGTCAGGG-TTAGACTCCACCAATGCGTTTATGGTGGTGCAGGTTTTG 967
Query 834 AAACGAATTGCTCAAAGTGGCAGTATCGTAATTATGTCGATCCATCAACCTAGTGCTCGA 893
|||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 968 AAACGAATTGCTCAGAGTGGCAGTGTCGTAATTATGTCGATCCATCAACCTAGTGCACGT 1027
Query 894 AT-AGTGGAGTTGCTTGATCGGCTTATCATCTTATCTCGTGGCAAAAGTGTGTTCAATGG 952
|| | ||| |||||||||||||||||||||||||||| || || ||||||||||||||
Sbjct 1028 ATCATTGGT-TTGCTTGATCGGCTTATCATCTTATCTCACGGGAAGAGTGTGTTCAATGG 1086
Query 953 ATCTCCGGCTAGTCTTCC--CGGATTCTTCTCC-GACTTCGGTCGACCGATCCCGGAGAA 1009
|||||||| ||||||||| || ||||||||| | ||| || || || || || |||||
Sbjct 1087 ATCTCCGGTTAGTCTTCCTTCG--TTCTTCTCCAG-CTTTGGCCGTCCCATTCCAGAGAA 1143
Query 1010 AGAGAACATCACAGAGTTCGCACTTGATTT-AGTTCGAGAGCTCGAAGGATCCAATCAAG 1068
||| |||||||||||||||||||||||| | | |||||||||| ||||||||| | |||
Sbjct 1144 AGAAAACATCACAGAGTTCGCACTTGATGTCA-TTCGAGAGCTTGAAGGATCCTCTGAAG 1202
Query 1069 GAACTAAAGCTTTAGTAGACTTCAACGAAAAGTGGCAACAAAAC-AAGATCAGTCTCATC 1127
|||| | || ||||||||| |||||||||||||||||||| ||| || | | | || |
Sbjct 1203 GAACCAGAGATTTAGTAGAATTCAACGAAAAGTGGCAACAGAACCAA-A-CTG-CT-AG- 1257
Query 1128 CAATCTGCTCCACAA-ACCAATGAGCTCGAGCCAGACCGCGCATTATCTTTAAAAGAAGC 1186
| || | |||| || || || ||| | | | |||| ||||||||||
Sbjct 1258 -A----GC-C-ACAACAC-AA--AG-TCG--C--G--------T-ATCTCTAAAAGAAGC 1293
Query 1187 CATCAATGCAAGTGTTTCTAGAGGCAAACTAGTCTCAGGCTCATCTAGATCCAATCCCAC 1246
|||| |||||||||||||||||| ||||||||||| ||||||||| || ||||||| |
Sbjct 1294 CATCGCTGCAAGTGTTTCTAGAGGGAAACTAGTCTCTGGCTCATCTGGAGCCAATCCTA- 1352
Query 1247 T-TCGATGGAAACAGTATCTTCATACGCAAACCCGTCGTTGTTCG-AAACATTCATCTTA 1304
| || |||||||||||||||||||||||||||||| | ||| || |||| || ||||||
Sbjct 1353 TATCAATGGAAACAGTATCTTCATACGCAAACCCGCCATTGG-CGGAAACGTTTATCTTA 1411
Query 1305 GCCAAACGGTATATGAAAAACTGGATCCGGATGCCCGAGCT-AGTAGGAACGCGGATCGC 1363
|| |||||||| || |||||||||||||| | ||| ||||| | |||||| |||||| |
Sbjct 1412 GCTAAACGGTACATAAAAAACTGGATCCGCACGCCTGAGCTCA-TAGGAATGCGGATTGG 1470
Query 1364 TACCGTAATGGTGACTGGTTCT-CTCTTAGCCACTGTTTATTGGAAGCTAGACCACACCC 1422
||| || |||||||||||| || |||||||| ||||| ||||||| ||| ||| |||| |
Sbjct 1471 TACTGTCATGGTGACTGGT-CTTCTCTTAGCTACTGTATATTGGAGGCTTGACAACACTC 1529
Query 1423 CAAGAGGAGCACAAGAGAGATTGACCTTGTTCGCATTCG-TCGTGCCCACAATGTTCTAT 1481
||||||| |||||||||||| || ||| || || |||| | || ||||||||||||||
Sbjct 1530 CAAGAGGTGCACAAGAGAGAATGGGCTTCTTTGCGTTCGGTA-TGTCCACAATGTTCTAT 1588
Query 1482 TGTTGTTTAGACAATGTCCCCGTTTTTATCCAAGAACGATACATTTTCTTAAGAGAGACA 1541
|||||| |||||| |||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1589 TGTTGTGCAGACAACATCCCTGTTTTTATCCAAGAACGATACATTTTCTTGAGAGAGACA 1648
Query 1542 ACACACAATGCTTACAGAACATCTTCATATGTCATATCTCACTCTCTAGTGTCTCTTCCT 1601
|| ||||| || |||||||||||||||||||| ||||||||| |||| |||||||| |||
Sbjct 1649 ACGCACAACGCATACAGAACATCTTCATATGTTATATCTCACGCTCTTGTGTCTCTGCCT 1708
Query 1602 CAGCT-CATTGCCC-CTTCC-TTAGTATTTTCCGCGA-TCACATTCTGGACGGTTGGATT 1657
||||| | |||| | || || || | |||| |||| | | ||||| ||||| ||||| ||
Sbjct 1709 CAGCTAC-TTGCTCTCT-CCATT-GCATTTGCCGCAACT-ACATTTTGGACCGTTGGTTT 1764
Query 1658 GAGCGGCGGATTAGAGGGTTTCTTCTTT-TATTGCCTCCTGATCTATGCCTCCTTTTGGT 1716
||||||||| |||||| ||||||| || || |||||| | || || || |||||||||
Sbjct 1765 GAGCGGCGGGTTAGAGAGTTTCTT-TTACTACTGCCTCATAATATACGCAGCCTTTTGGT 1823
Query 1717 CTGGATCTTCCGTTGTCACCTTCATATCAGGTGTTG-TTCCGCATATCATGTT-ATGTTA 1774
||||||| ||| |||| || ||||| || ||| || ||||| || ||||| | | ||||
Sbjct 1824 CTGGATCCTCCATTGTTACTTTCATTTCCGGT-TTAATTCCGAATGTCATGATGA-GTTA 1881
Query 1775 CATGGTTGCCATTACCTATCTCGCCTACTGTTTACTGTTGAGTGGATTCTACGTCAACCG 1834
|||||| | ||| ||||||| |||| ||| ||||| || ||||||||||| |||||||
Sbjct 1882 CATGGTCACTATTGCCTATCTTTCCTATTGTCTACTGCTGGGTGGATTCTACATCAACCG 1941
Query 1835 AGATCGAATACCGTTTTACTGGACATGGTTTCATTATATTTCA-TTGCTCAAGTATCCCT 1893
||||| |||||||| ||||||| |||||||||||| ||||| || || ||||||||||
Sbjct 1942 GGATCGGATACCGTTGTACTGGATATGGTTTCATTACATTTCGCTT-CTGAAGTATCCCT 2000
Query 1894 ATGAGGCAGT-CTTGATCAACGAGTTTGATGACCCGTCTCGTTGTTTTGTTAAGGGAGTC 1952
| ||||| || || ||||| ||||||||||||||||| ||||||||||| ||||||||
Sbjct 2001 ACGAGGCTGTTCTA-ATCAATGAGTTTGATGACCCGTCACGTTGTTTTGTAAAGGGAGTT 2059
Query 1953 CAGGT-TTTCGACAGTACTCTTCTCGGAGGA-GTGTCTGAT-TCCGGGAAGGTTAAGCTT 2009
|| || ||| || |||| ||| | || ||| ||||| || | | |||||||||||
Sbjct 2060 CAAGTATTT-GATGGTACGCTTTT-GGCGGAAGTGTCCCATGTGATG-AAGGTTAAGCTC 2116
Query 2010 CTTGAAACTCTCAGTGATTCTCTGAG-AACGAGGATAACGGAGTCCACATGCTTGAGGAC 2068
|| || || || |||| ||| | || ||||| |||||| ||||||||||||||||| ||
Sbjct 2117 CTAGATACACTGAGTGGCTCTTT-AGGAACGAAGATAACAGAGTCCACATGCTTGAGAAC 2175
Query 2069 TGGGTCTGACTTACTTGCACAGCAAGGTATTACTCAATTGAACAAGTGGGATTGCTTGTG 2128
|| ||||||||||| ||||||||||| |||||||||| ||||||||||||||| ||
Sbjct 2176 AGGACCTGACTTACTTATGCAGCAAGGTATAACTCAATTGAGCAAGTGGGATTGCTTATG 2235
Query 2129 GATTACGTTTGCTTCGGGTCTCTTTTTTAGGATCTTATTTTACTTCG-CCTTGCTGTTCG 2187
||||||||| |||| ||||||||| ||||||||||| |||||||| | ||||||||||||
Sbjct 2236 GATTACGTTAGCTTGGGGTCTCTTCTTTAGGATCTTGTTTTACTT-GTCCTTGCTGTTCG 2294
Query 2188 GGAGCAGGAATAAGAGGACGTGAAGGT 2214
|||| | ||||||||||||||||||||
Sbjct 2295 GGAGTAAGAATAAGAGGACGTGAAGGT 2321
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 110692201725
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5