BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg938480 Length=548 Score E Sequences producing significant alignments: (Bits) Value AT3G55470.1 | Symbols: | Calcium-dependent lipid-binding (CaLB... 904 0.0 > AT3G55470.1 | Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr3:20564236-20566329 FORWARD LENGTH=828 Length=828 Score = 904 bits (489), Expect = 0.0 Identities = 528/547 (97%), Gaps = 2/547 (0%) Strand=Plus/Plus Query 3 aaaaaaaaaCTCTATAGAGATGGCTGTTGGAATCCTTGAGGTTAGTCTGATCAGTGGCAA 62 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 102 AAAAAATAACTCTACAGAGATGGCTGTTGGAATCCTTGAGGTTAGTCTGATCAGTGGCAA 161 Query 63 AGGTCTTAAGCGCTCTGATTTTCTTGGCAAGATAGATCCATATGTTGAGATCCAATACAA 122 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 162 AGGTCTCAAGCGCTCTGATTTTCTTGGTAAGATAGATCCATATGTTGAGATCCAATACAA 221 Query 123 AGGCCAAACCCGCAAAAGCAGCGTTGCTAAAGAAGATGGAGGTAGAAATCCGACATGGAA 182 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 222 AGGGCAAACCCGCAAAAGCAGCGTTGCTAAAGAAGATGGAGGTAGAAATCCGACATGGAA 281 Query 183 TGATAAATTGAAATGGAGAGCAGAGTTTCCTGGCTCCGGCGCGGACTACAAACTCATCGT 242 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 282 TGATAAATTGAAATGGAGAGCAGAGTTTCCTGGCTCCGGCGCCGACTACAAACTCATCGT 341 Query 243 CAAAGTCATGGATCATGATACTTTCTCCACCGATGATTTCATCGGCGAAGCCACGGTACA 302 |||||||||||||||||||||||||||| | || |||||||| ||||||||||||||||| Sbjct 342 CAAAGTCATGGATCATGATACTTTCTCCTCTGACGATTTCATTGGCGAAGCCACGGTACA 401 Query 303 TGTGAAAGAGCTGTTGGAAATGGGAGTGGAGAAGGGAACGGCTGAGCTAAGGCCAACCAA 362 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 402 TGTGAAAGAGCTATTGGAAATGGGAGTGGAGAAGGGAACGGCGGAGCTAAGGCCAACCAA 461 Query 363 GTACAACATTGTTGACTCCGATCTCTCCTTTGTCGGCGAGCTTCTCATCGGAGTTTCTTA 422 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 462 GTACAACATTGTTGACTCCGATCTCTCCTTTGTCGGCGAGCTTCTCATTGGAGTTTCTTA 521 Query 423 CTCTCTTTTGCAAGACAGGGGAATGGATGGGGAACAGTTTGGAGGATGGAAGCATAGCCG 482 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 522 CTCTCTTTTGCAAGACAGGGGAATGGATGGAGAACAGTTTGGAGGATGGAAGCATAGCCA 581 Query 483 AGTTGATTAGTTTCGTTTCGTAAAACTGCTGATTTTATCTTCTTCTT-TAATCTTTAGTG 541 ||||||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||| Sbjct 582 AGTTGATTAGTTTGGTTTCTTAAAACTGCTGATTTTATCTTCTTCTTCTA-TCTTTAGTG 640 Query 542 TCAACAT 548 ||||||| Sbjct 641 TCAACAT 647 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26272458881 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5