BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg938559 Length=1818 Score E Sequences producing significant alignments: (Bits) Value AT3G56080.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 2881 0.0 > AT3G56080.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:20810309-20813036 REVERSE LENGTH=2098 Length=2098 Score = 2881 bits (1560), Expect = 0.0 Identities = 1736/1822 (95%), Gaps = 7/1822 (0%) Strand=Plus/Plus Query 1 TTGTGTGG--AAACGTAAGAAAGAATGATCAAGAACATCTTCCAAAGTCGGAAACTCTCA 58 |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 26 TTGTGTGGAAAAACG-AAGAAAGAATGATCAAGAACATCTTCCAAAGTCGGAAACTCTCA 84 Query 59 GGCCTCTGTGTTCTCTCAATCTTGCTCGTATCAGTCACAATCCTCCTCTTAACCAATGAC 118 || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 85 GGTCTCTGTGTTCTCTCAATCTTGCTCGTATCAGTCACAATCCTCCTCTTGACCAATGAT 144 Query 119 ACCATCGAtctcttcccttacttgtctctctcttatctccgtcgatcttctctctcCGAC 178 |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| | Sbjct 145 ACCATCGATCTCTTCCCTTACTTGTCTCTCCCTTATCTCCCTCGATCTTCTCTCTCCGTC 204 Query 179 ATCCCTACCTCCACACCAATCTCGAGTCCCACCAACGACTCGTCTCCTCCTCGGGAACCA 238 |||||||||||||| |||||||||||||||||||||||||| || ||||||| |||| || Sbjct 205 ATCCCTACCTCCACGCCAATCTCGAGTCCCACCAACGACTCATCACCTCCTCTGGAATCA 264 Query 239 CCGGTTAATCAGACCCGAGTCGATGATCATCC-GAATGATCAAGGTTTGGAATTGGATTG 297 ||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct 265 CCGGTTAATCAAACCCGAGTCGATGATCATCCTG-ATGATCAAGGTTTGGAATTGGATTG 323 Query 298 GCTTAAAGACGACAAAGAATGGAATGTGAGTTTGAAGATAGATTGGAGGAGATGTGAGAG 357 ||||||||| |||||| ||||||| |||||||||||||||||||||| |||||||||||| Sbjct 324 GCTTAAAGATGACAAACAATGGAACGTGAGTTTGAAGATAGATTGGAAGAGATGTGAGAG 383 Query 358 TCCAGATTACATACCGTGTTTGGATAACACAAAAGCTATCAAGAAACTTAAGTCGAAGAG 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 384 TCCAGATTACATACCGTGTTTGGATAACACAAAAGCTATCAAGAAACTTAAGTCGAAGAG 443 Query 418 GAACATGGAACACAGAGAGAGACATTGTCCCGAGCCTGCACCTAAATGTTTGGTTCCTTT 477 |||||||| |||||||||||||||||||| |||| | |||| ||||||||||||||||| Sbjct 444 AAACATGGAGCACAGAGAGAGACATTGTCCTGAGCGTTCACCAAAATGTTTGGTTCCTTT 503 Query 478 GCCACAACGTTACAAAGTTCCTCTTCCTTGGCCTCAGAGTAGGGACATGATTTGGTATGA 537 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 504 GCCACAACATTACAAAGTTCCTCTTCCTTGGCCTCAGAGTAGAGACATGATTTGGTATGA 563 Query 538 TAATGTTCCTCATCCGAAACTTGTTGAATATAAGAAAGATCAGAATTGGGTTCGTAAATC 597 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 564 TAATGTTCCTCATCCGAAACTTGTAGAATACAAGAAAGATCAGAATTGGGTTCGTAAATC 623 Query 598 TGGACCTTTCTTTGTCTTCCCTGGAGGTGGAACTCAATTCAAAGACGGTGTTATTCACTA 657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 624 TGGACCTTTCTTTGTCTTCCCTGGAGGTGGAACTCAATTCAAAGACGGTGTTATTCACTA 683 Query 658 CATCAACTTCATACAAAAGACGTTACCTGTTCTTGAATGGGGGAAGAAAGTAAGAGTGGT 717 |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 684 CATCAACTTCATACAAAAGACGTTACCTATTCTTGATTGGGGGAAGAAAGTAAGAGTGGT 743 Query 718 TCTTGATGTTGGTTGTGGTGTGGCTAGCTTTGGTGGGACTTTACTTGATAAAAACGTAAT 777 ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 744 TCTAGATGTTGGTTGTGGTGTGGCTAGCTTTGGTGGGACTTTACTTGATAAGAACGTTAT 803 Query 778 CACAATGTCATTTGCTCCTAAAGACGAACACGAAGCTCAGATTCAGTTCGCACTAGAACG 837 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 804 CACAATGTCATTTGCTCCTAAAGACGAACACGAAGCTCAGATTCAGTTCGCACTGGAACG 863 Query 838 AGGAATTCCCGCTACTCTGGCTGTTATTGGAACTCAAAAGCTTCCTTTTCCTGATAATGC 897 ||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 864 AGGGATTCCCGCTACACTCGCTGTTATTGGAACTCAAAAGCTTCCTTTTCCTGATAATGC 923 Query 898 TTATGACGTTATCCATTGCGCTAGATGCAGAGTCCATTGGCATGGATACGGTGGTAGACC 957 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 924 TTACGACGTAATCCATTGCGCTAGATGCAGAGTCCATTGGCATGGATACGGTGGTAGACC 983 Query 958 ACTTTTGGAACTTAACCGGGTTCTAAGGCCTGGAGGGTTTTTTGTTTGGTCAGCTACACC 1017 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 984 ACTTTTGGAACTTAACCGGGTTCTAAGGCCTGGAGGGTTTTTTGTTTGGTCAGCTACACC 1043 Query 1018 GGTTTATCAACACGATGAAGGGCACCGTAATGTTTGGAAAACAATGGAGTCTTTGACTAC 1077 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1044 AGTTTATCAACACGACGAAGGGCACCGTAATGTTTGGAAAACAATGGAGTCTTTGACTAC 1103 Query 1078 ATCAATGTGTTGGAAAGTTGTGGCTAGAACTCGATTCACTAAAGTTGGATTCGTTATTTA 1137 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1104 ATCAATGTGTTGGAAAGTTGTGGCTAGAACTCGATTCACTAAAGTTGGATTCGTGATTTA 1163 Query 1138 CCAGAAACCAAACTCAGATTCTTGCTATGAATCGCGTAAAGACAAAGATCCGCCTCTCTG 1197 |||||||||| ||||||||||||| |||||||| |||||| ||||||||||||||||||| Sbjct 1164 CCAGAAACCAGACTCAGATTCTTGTTATGAATCTCGTAAAAACAAAGATCCGCCTCTCTG 1223 Query 1198 CATCGAAGAAGAGACCAAGAAGAACAGTTCATGGTACACTCCTCTGCTCACCTGTCTACC 1257 ||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1224 CATTGAAGAAGAGACCAAGAAGAACAGTTCATGGTACACTCCTCTGCTTACTTGTCTACC 1283 Query 1258 AAAACTACCGGTCAGTCCAATCGGAAAATGGCCTTCGGGTTGGCCTGAAAGGTTAACTGA 1317 |||||||||||||||||||| || ||||||||||| ||||||||||| |||||||| || Sbjct 1284 GAAACTACCGGTCAGTCCAATAGGGAAATGGCCTTCCGGTTGGCCTGAGAGGTTAACGGA 1343 Query 1318 TACACCGGTTAGCCTCTTGAGAGAACAGAGGAGTGAAGAGAGTTTCAGAGAAGACA-CTA 1376 ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| | | Sbjct 1344 GACACCGGTTAGCCTCTTTAGAGAGCAGAGGAGTGAAGAGAGTTTCAGAGAAGACAGC-A 1402 Query 1377 AACTCTGGTCTGGAGTCATGTCAAATATCTACCTATATAGTCTAGCTATAAACTGGACCA 1436 |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | Sbjct 1403 AACTCTGGTCTGGAGTCATGTCTAATATCTACCTATATAGTTTAGCTATAAACTGGACTA 1462 Query 1437 GGATTCACAATGTTATGGACATGAACGCTGGTTATGGAGGATTTGCGACTGCTCTTATAA 1496 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1463 GGATTCACAATGTTATGGACATGAACGCTGGTTATGGAGGATTTGCGGCTGCTCTTATAA 1522 Query 1497 ACAAACCTCTCTGGGTGATGAATGTGATTCCTGTGGAAGGTGAAGACACATTATCGACGA 1556 |||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct 1523 ACAAACCTCTGTGGGTGATGAATGTGATTCCTGTAGAAGGTGAAGACACGTTATCGACGA 1582 Query 1557 TTTTCGATAGAGGTTTGATCGGGATTTATCATGATTGGTGTGAGTCGTTCAATACATATC 1616 |||| |||||||||||||| ||||| || ||||||||||||||||||||||||||||| | Sbjct 1583 TTTTTGATAGAGGTTTGATAGGGATATACCATGATTGGTGTGAGTCGTTCAATACATACC 1642 Query 1617 CAAGATCATATGATCTCTTGCACTCTAGTTTCCTTCTCACCAGTCTTTCTCAAAGGTGTG 1676 ||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||| Sbjct 1643 CAAGATCATATGATCTCTTGCACTCTAGTTTCCTTTTTACCAATCTTTCTCAAAGGTGTG 1702 Query 1677 ATTTGATGGAGGTGGTAGTGGAAATAGACAGAATAGTAAGACCAGGAGGGTATCTTGTGG 1736 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || Sbjct 1703 ATTTGATGGAGGTGGTAGTGGAAATAGACCGAATACTAAGACCAGGAGGGTATCTTGCGG 1762 Query 1737 TGCAAGACACTGTTGAAATGTTGAAGAAGTTAAACCCTATTCTTTTATCACTCCGATGGT 1796 ||||||||||||| |||||| | |||||| |||||||||||||||||||||||||||||| Sbjct 1763 TGCAAGACACTGTCGAAATGCTAAAGAAGCTAAACCCTATTCTTTTATCACTCCGATGGT 1822 Query 1797 CAACGAATATGTACAGAGGCAA 1818 |||||||| ||||||||||||| Sbjct 1823 CAACGAATCTGTACAGAGGCAA 1844 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 89959376640 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5