BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg938681 Length=554 Score E Sequences producing significant alignments: (Bits) Value AT3G57090.1 | Symbols: BIGYIN, FIS1A | Tetratricopeptide repeat... 902 0.0 > AT3G57090.1 | Symbols: BIGYIN, FIS1A | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:21128530-21130189 FORWARD LENGTH=818 Length=818 Score = 902 bits (488), Expect = 0.0 Identities = 533/555 (96%), Gaps = 2/555 (0%) Strand=Plus/Plus Query 1 AAAGCTCAAAATCGCCTTCAATGGATGCTAAGATCGGACAATTCTTTGACTCCGTCGGTT 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 78 AAAGCTCAAAATCGCCTTCAATGGATGCTAAGATCGGACAATTCTTTGACTCCGTCGGTA 137 Query 61 CCTTCTTCAGCGGCAGCGATAAGATCCCATGGTGCGACGGAGATGTCATCGCTGGGTGTG 120 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 138 CTTTCTTCAGCGGCAGCGATAAGATCCCATGGTGCGACGGAGATGTCATCGCTGGATGTG 197 Query 121 AAAGAGAGGTTCGAGAGGCCACAGATGCTGGCTCTGAAGATCTGAAGAAAGAGTGCTTGA 180 |||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| Sbjct 198 AAAGAGAGGTTCGAGAGGCCACAGATTCTGGCACTGAAGATCTTAAGAAAGAGTGCTTGA 257 Query 181 TGCGATTGTCGTGGGCTCTTGTTCATTCCCGTCAAACCGAAGATGTTCAACGCGGAATAG 240 |||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||| Sbjct 258 TGCGATTGTCATGGGCCCTTGTTCATTCCCGTCAAACGGAAGATGTTCAACGTGGAATAG 317 Query 241 CCATGCTTGAAGCATCTCTGGAAAGCAGTGCCCCTCCTTTAGAGGACCGAGAGAAGCTCT 300 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct 318 CCATGCTTGAAGCATCTCTGGAAAGCAGTGCCCCTCCATTGGAGGACCGAGAGAAGCTCT 377 Query 301 ATCTTCTTGCTGTTGGATATTACAGAAGTGGGGACTACTCGAA-GAGCAGGCAGCTCGTG 359 |||||||||||||||| ||||||||||||||| | ||||| || |||||||||||||||| Sbjct 378 ATCTTCTTGCTGTTGGGTATTACAGAAGTGGGAATTACTC-AAGGAGCAGGCAGCTCGTG 436 Query 360 GACCGCTGTATTGAGATGCAAGCTGATTGGAGACAAGCTTTGGTCCTAAAGAAGACCATC 419 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 437 GACCGCTGTATCGAGATGCAAGCTGATTGGAGACAAGCTTTGGTCCTAAAGAAGACCATC 496 Query 420 GAAGACAAAATCACAAAGGATGGTGTTATAGGGATAGGGATCACTGCTACAGCCTTTGGC 479 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 497 GAAGACAAAATCACAAAGGATGGTGTTATAGGGATAGGGATCACGGCTACAGCCTTTGGA 556 Query 480 GCCGTGGGTCTCATAGCCGGTGGTATCGTAGCAGCGATGTCTCGCAAAAAATGAAAACCA 539 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 557 GCTGTGGGTCTCATAGCCGGTGGTATCGTAGCAGCGATGTCTCGCAAGAAATGAAAACCA 616 Query 540 CAACCATGACTTCTT 554 ||||||||||||||| Sbjct 617 CAACCATGACTTCTT 631 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26573863763 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5