BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg938858
Length=2471
Score E
Sequences producing significant alignments: (Bits) Value
AT3G58640.1 | Symbols: | Mitogen activated protein kinase kina... 4150 0.0
AT2G42640.1 | Symbols: | Mitogen activated protein kinase kina... 545 6e-154
AT2G31010.1 | Symbols: | Protein kinase superfamily protein | ... 536 3e-151
> AT3G58640.1 | Symbols: | Mitogen activated protein kinase kinase
kinase-related | chr3:21686743-21693831 REVERSE LENGTH=3268
Length=3268
Score = 4150 bits (2247), Expect = 0.0
Identities = 2403/2478 (97%), Gaps = 11/2478 (0%)
Strand=Plus/Plus
Query 1 TAGACATCAAGGAAGTTGGCAATGGGAGAGACGGGAGATGATGCTGGGCCATCAGAGCAA 60
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 408 TAGACATTAAGGAAATTGGCAATGGGAGAGACGGGAGATGATGCTGGGCCATCAGAGCAA 467
Query 61 GGACCTTCTAATCAAACCTGGTGGCCTTCAGAATTTGTGGAGAGATTTGGTTCTGTTTAT 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 468 GGACCTTCTAATCAAACCTGGTGGCCTTCAGAATTTGTGGAGAAATTTGGTTCTGTTTAT 527
Query 121 CTGGGATCGCAAGAAGAGATC-TCTAGTACTAAAGACTCACCCAGAAATCTTGGGCAAGA 179
||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||
Sbjct 528 CTGGGATCGCAAGAAGAGA-CATCTAGTACTAAAGACTCACCTAGAAATCTTGGGCAAGA 586
Query 180 TGGGCTGCCATCTACTACTGCCTCTAATATTCTCTGGAGTACTGGTTCACTTTCTGAGCC 239
|||||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||
Sbjct 587 TGGGCTGCCATCTAGTACTGCTTCGAATATTCTTTGGAGTACTGGTTCACTTTCTGAGCC 646
Query 240 CATCCCAAATGGCTTCTACTCTGTGATCCCGGATAATAGATTGAAGCAACTATTTAATAG 299
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 647 CATCCCAAATGGCTTCTACTCTGTGATCCCGGATAATAGATTGAAGCAGCTATTTAATAA 706
Query 300 CATTCCTACATTGGAAGATCTTCATGCTCTGGGTGAGGAAGGTCTTAAGGCTGATGTGAT 359
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 707 CATTCCTACATTGGAAGATCTTCATGCTCTGGGTGACGAAGGTCTTAAGGCTGATGTGAT 766
Query 360 TCTAGTTGATTTTCAGAAAGATAAGAAGCTTTTCAGGCAAAAGCAGTTGATTACCAAACT 419
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 767 TCTAGTTGATTTTCAGAAAGATAAAAAGCTTTTCAGGCAGAAGCAGTTGATTACCAAACT 826
Query 420 TGTCAGTGGATTGAACTCAAAGCCACCTACTATTATTAAGAAAATTGCTGGACTGGTAGC 479
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 827 TGTCAGTGGATTGAACTCAAAGCCAGCTACTATTATTAAGAAAATTGCTGGACTGGTAGC 886
Query 480 AGATGTTTATAAGCAATCAACTCTGCAGAGTCCGGCAAAAACTACGCAATCATTTGAAAA 539
||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||
Sbjct 887 AGATGTTTATAAGCAATCAACTCTGCAGAGTCCAGCAAAAAGTACGCAGTCATTTGAAAA 946
Query 540 CTGTGGTATTCAACTGCTAGGACAGATCAAGCATGGTTCTTGTCGTCCTCGAGCAATCTT 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 947 CTGTGGTATTCAACTGCTAGGACAGATCAAGCATGGTTCTTGTCGTCCTCGAGCAATCTT 1006
Query 600 GTTCAAAGTTTTAGCGGATACCGTTGGTCTTCAAAGTAGGCTTGTAGTGGGTTTGCCAAG 659
||||||||| ||||| ||||| ||||| || |||||| | ||||||||||||||||||||
Sbjct 1007 GTTCAAAGTCTTAGCTGATACTGTTGGCCTGCAAAGTCGACTTGTAGTGGGTTTGCCAAG 1066
Query 660 TGATGGAGCTGCTGAGAGTGTGGACTCATATAGTCATATTTCTGTCACTGTTCTGCTGAA 719
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1067 TGATGGAGCTGCTGAGAGTGTGGACTCATATAGTCATATTTCTGTCACTGTTTTGCTGAA 1126
Query 720 TTCTGTGGAAATGCTGGTTGATCTAATGCGATTTCCTGGCCAGCTTATTCCTCTATCAAC 779
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 1127 TTCTGTGGAAATGCTGGTTGACCTAATGCGATTTCCTGGTCAGCTTATTCCTCTATCAAC 1186
Query 780 CAAGGCAATTTTTATGAGTCATATCTCAGCGGCAGGGGAAAGTGATTCTGCAGAGAATGA 839
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1187 CAAAGCAATTTTTATGAGTCATATCTCAGCGGCAGGGGAAAGTGATTCTGCAGAGAATGA 1246
Query 840 CTCTTGTGATTCACCTTTGGAGCCAAACAGTCCCATGTTTGGTTATCCAGAGAGAAAT-G 898
||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |
Sbjct 1247 CTCTTGTGATTCACCTTTGGAGCCAAACAGTCCCATGTTTGGTTATCCAGAGA-AATTTG 1305
Query 899 ACGC-TGAAAATGCAGAAAAAGATGAAAACCTTTCGTTGCACAGGAAACTGGATGGGTCT 957
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1306 AC-CATGAAAATGCAGAAAAAGATGAAAACCTTTCGTTGCACAGGAAACTGGATGGGTCT 1364
Query 958 CCAAATACGTCTGGTCCACCATCAAGGAATGTGCTGTTACGATCTGCCTCTGCGCTAGAG 1017
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1365 CCAAATACGTCTGGTCCACCATCAAGGAATATGCTGTTACGATCTGCCTCTGCGCTAGAG 1424
Query 1018 AGGAAATTAAGTTTCTCACAGAGCGAGTCAAACATGGCTAACGAGTTTTGGCGGCAGAGC 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1425 AGGAAATTAAGTTTCTCACAGAGCGAGTCAAACATGGCTAACGAGTTTTGGCGGCAGAGC 1484
Query 1078 CGGAGAAAGGTCATTGCTGATCAGCGGACTGCTAGTTCCAGTCCCGAACATCTTTCCTTC 1137
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1485 CGGAGGAAGGTCATTGCTGATCAGCGGACTGCTAGTTCCAGTCCCGAACATCTTTCCTTC 1544
Query 1138 CGAGCACGTACAAGGTCCATGCTAAGTGGCGACAAGAACTTGGCACGAGATTTCACCGGT 1197
||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1545 CGAGCCCGTACAAAGTCCATGCTAAGTGGCGACAAGAACTTGGCACGAGATTTCACCGGG 1604
Query 1198 GATGTTGCCATATCAAGCTGCAAATCTGTCGGAGGAGCGAAATTGGAAACTAAGAGAATA 1257
|||||||||| |||||||||||||||||| |||||||| ||| |||||||||||||||||
Sbjct 1605 GATGTTGCCACATCAAGCTGCAAATCTGTTGGAGGAGCAAAAATGGAAACTAAGAGAATA 1664
Query 1258 AGGAGGAGAAGCATCAGTATAACTCCTGAGATTGGCGATGATATTGTCAGGGCAGTAAGA 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1665 AGGAGGAGAAGCATCAGTATAACTCCTGAGATTGGCGATGATATTGTCAGGGCAGTACGA 1724
Query 1318 GCGATGAATGAAGCCTTGAAGCAGAATCGCCTCTCAAAAGAGCAAGGGGATGATGGTTCA 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1725 GCGATGAATGAAGCCTTGAAGCAGAATCGCCTCTCAAAAGAGCAAGGGGATGATGATTCA 1784
Query 1378 TCTCCTAACTCTCCAAATGACAGAACCGAGAGCTCTCATCTCCAGAAAAATGTCTCTGGT 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1785 TCTCCTAACTCTCCAAATGACAGAACCGAGAGCTCTCATCTCCAGAAAAATGTCTCTGGT 1844
Query 1438 TTTCATCTTGATGCTCATGACCAAGTTTCTGGTGGAAGGTCGACACTTTCAAGGGAACCA 1497
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1845 TTTCATCTTGATGCCCATGACCAAGTTTCTGGTGGAAGGTCGACACTTTCAAGGGAACCA 1904
Query 1498 CTAGATCCGCAGAAGGCAATCTCACTACCGTCTTCTCCCCAGAACTACCGAAGCCAATAT 1557
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1905 CTAGATCCGCAGAAGGCAATCTCACTACCTTCTTCTCCCCAGAACTACCGAAGCCAATAT 1964
Query 1558 GAACAGAGTGGATCGTCACATCGTAATATAAGCCATATCTGGGATAAAGT-TCTGGGATC 1616
||||||||||||||||||||||| ||||||||||| |||||||||||||| | |||||||
Sbjct 1965 GAACAGAGTGGATCGTCACATCGCAATATAAGCCACATCTGGGATAAAGTAT-TGGGATC 2023
Query 1617 TCCCATGTTCCAGAATAAGCCATTATTACCATATGAAGAATGGAACATAGACTTCTCTGA 1676
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2024 TCCCATGTTCCAGAATAAGCCATTATTACCTTATGAAGAATGGAACATAGACTTCTCTGA 2083
Query 1677 GTTGACTGTTGGGACACGTGTCGGAATTGGATTTTTCGGAGAAGTATTCCGTGGGATCTG 1736
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2084 GCTGACTGTTGGGACACGTGTCGGAATTGGATTTTTCGGAGAAGTATTCCGTGGGATCTG 2143
Query 1737 GAACGGGACAGACGTTGCGATCAAAGTGTTCCTTGAGCAAGACCTTACAGCTGAGAACAT 1796
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2144 GAACGGGACAGACGTTGCTATCAAAGTGTTCCTTGAGCAAGACCTTACAGCTGAGAACAT 2203
Query 1797 GGAGGACTTCTGCAATGAGATATCAATTCTTAGCCGACTTAGACATCCCAATGTTATACT 1856
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2204 GGAGGATTTCTGCAATGAGATATCAATTCTTAGCCGACTTAGACATCCCAATGTTATACT 2263
Query 1857 GTTCCTTGGAGCATGCACAAAGCCTCCACGATTATCATTGATCACTGAGTACATGGAAAT 1916
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2264 GTTCCTTGGAGCATGCACAAAGCCTCCACGATTATCACTGATCACTGAGTACATGGAAAT 2323
Query 1917 GGGATCTTTGTATTATTTGCTCCACATGAGTGGACaaaaaaaGAGGTTAAGCTGGCGGAG 1976
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2324 GGGATCTTTGTATTACTTGCTCCACTTGAGTGGACAAAAAAAGAGGTTAAGCTGGCGGAG 2383
Query 1977 GAAGCTAAAGATGCTGCGTGACATTTGCAGGGGCTTGATGTGCATACACCGGATGGGGAT 2036
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct 2384 GAAGCTAAAGATGCTGCGGGACATTTGCAGGGGATTGATGTGTATACACCGGATGGGGAT 2443
Query 2037 AGTACACCGTGATATAAAGAGCGCAAACTGTCTTTTGAGCAACAAATGGACAGTCAAGAT 2096
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2444 AGTACACCGTGATATAAAGAGTGCAAACTGTCTTTTGAGCAACAAATGGACAGTCAAGAT 2503
Query 2097 CTGTGATTTTGGGCTCTCGAGAATAATGACAGGCACAACAATGAGAGACACAGTCTCAGC 2156
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 2504 CTGTGATTTTGGGCTGTCGAGAATAATGACAGGGACAACAATGAGAGACACAGTCTCTGC 2563
Query 2157 AGGAACTCCAGAGTGGATGGCTCCTGAACTTATCCGCAATGAGCCCTTCTCAGAAAAGTG 2216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2564 AGGAACTCCAGAGTGGATGGCTCCTGAACTTATCCGCAATGAGCCCTTCTCAGAAAAGTG 2623
Query 2217 TGATATCTTCAGCTTAGGTGTAATAATGTGGGAACTCTGCACTTTAACCAGACCTTGGGA 2276
|||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 2624 TGATATCTTCAGTTTAGGTGTAATAATGTGGGAGCTATGCACTTTAACCAGACCTTGGGA 2683
Query 2277 AGGAGTACCGCCTGAACGGGTTGTTTATGCTATTGCTTACGAGGGAGCTCGGCTTGAGAT 2336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2684 AGGAGTACCGCCTGAACGGGTTGTTTATGCTATTGCTTACGAGGGAGCTCGGCTTGAGAT 2743
Query 2337 TCCTGAAGGACCGCTGGGAAAGCTTATTGCAGATTGTTGGACAGAACCGGAACAAAGACC 2396
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2744 TCCTGAAGGACCACTGGGAAAGCTTATTGCAGATTGTTGGACAGAACCGGAACAAAGACC 2803
Query 2397 GAGTTGCAATGAGATACTCTCTCGTTTGCTGGATTGCGAGTATTCGCTTTGCTAACTT-C 2455
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 2804 GAGTTGCAATGAGATACTCTCTCGTTTGCTGGATTGTGAGTATTCGCTTTGCTAACTTTC 2863
Query 2456 TGTCAATCAT-TTT-CCT 2471
| |||||||| ||| |||
Sbjct 2864 TCTCAATCATATTTTCCT 2881
> AT2G42640.1 | Symbols: | Mitogen activated protein kinase kinase
kinase-related | chr2:17758532-17764111 REVERSE LENGTH=2600
Length=2600
Score = 545 bits (295), Expect = 6e-154
Identities = 731/936 (78%), Gaps = 52/936 (6%)
Strand=Plus/Plus
Query 1502 ATCCGCAGAAGGCAATCTCACTACCGTCTTCTCCCCAGAA-CTACCGAAGCCAA-TA--T 1557
|||||| |||| |||| ||| | ||||| ||||| | ||| ||| | || ||| || |
Sbjct 1657 ATCCGCGGAAGTCAATATCATTGCCGTCATCTCCGC-GAAGCTATCAAATTCAATTATCT 1715
Query 1558 GAACAG-AGTGGATC-GTCACATCGTA-ATATAAGCCATATCTGGGATAAAGTTCTGGGA 1614
||| || ||| || | |||| || | | |||||||| || ||| || |||| || |||
Sbjct 1716 GAA-AGAAGT-GAACATTCACCTC-AAGAAATAAGCCACATTTGGAATGAAGTGCT-GGA 1771
Query 1615 -TCTCCCATGTTCCAGAATAAGCCATTATTACCATATGAAGAATGGAACATAGACTTCTC 1673
||||| |||||||||||||| || || ||||||| |||||||||||||||||| |||||
Sbjct 1772 GTCTCCAATGTTCCAGAATAAACCTTTGTTACCATTTGAAGAATGGAACATAGATTTCTC 1831
Query 1674 TGAGTTGACTGTTGGGAC-ACGTGTCGGAATTGG-ATTTTTCGGAGAAGTAT-TCCGTGG 1730
|||||| |||||| | | ||| || | ||| | || | |||| ||||| | |||||
Sbjct 1832 CAAGTTGAAAGTTGGGGCTTC-TGTTGGGAGTGGAACTTCT-GGAGTAGTATGT-CGTGG 1888
Query 1731 -GATCTGGAACGGGACAGACGTTGCGATCAAAG-TGTTCCTT-GAGCAAGACCTTACAGC 1787
| ||||||| || || ||||||||| ||| | || ||| || ||| | ||||||||
Sbjct 1889 CG-TCTGGAATAAAACTGAAGTTGCGATC-AAGATATTTCTTGGA-CAACAGCTTACAGC 1945
Query 1788 TGAGAACATGGAGGACTTCTGCAATGAGATATCAATTCTTAGCCGACTT-AGACATCCCA 1846
|||||||||| | | ||||||||||||||||| ||||||||||| ||| | ||||||||
Sbjct 1946 TGAGAACATGAAAGTTTTCTGCAATGAGATATCTATTCTTAGCCGTCTTCA-ACATCCCA 2004
Query 1847 ATGTTATACTGTTCCTTGGAGCATGCACAAAGCCTCCACGA-TTATCATTGATCACTGAG 1905
||||||| ||| ||||||||||||||||||||||||| | | |||||| || |||| |||
Sbjct 2005 ATGTTATTCTGCTCCTTGGAGCATGCACAAAGCCTCCTC-AGTTATCACTGGTCACAGAG 2063
Query 1906 TACATGGA-AATGGGATCTTTGTATTATTTGCTCCACATGAGTGGACaaaaaaaGAGGTT 1964
|| || || | ||| || |||||| || || | | | | | | |||||| || |||
Sbjct 2064 TATAT-GAGTACGGGGTCCTTGTATGATGTGAT-C-CGT-A--CCAGAAAAAAGGA-GTT 2116
Query 1965 AAGCTGGCGGAGGAAGCTAAAGATGCT-GCGTGACATTTGCAGGGGCTTGATGTGCATAC 2023
||||||| ||||| |||||||| || || ||| ||||||||||| ||||||| |||||
Sbjct 2117 GAGCTGGCAAAGGAAACTAAAGATTCTGGC-TGAAATTTGCAGGGGTTTGATGTACATAC 2175
Query 2024 ACCGGATGGGGATAGTACACCGTGATATAAAGAGCGCAAACTGTCTTTTGAGCAACAAAT 2083
|| |||||||||||| ||||||||| ||| || || ||||| || || | ||||| |
Sbjct 2176 ACAAGATGGGGATAGTCCACCGTGATCTAACCAGTGCGAACTGCCTGTT-A--AACAAGT 2232
Query 2084 GGACAGTCAAGATCTGTGATTTTGGGCTCTCGAGAATAATGACAGGCACAACAATGAGAG 2143
|| |||||||||||||||||||||||||||||||| |||||||| || || ||| ||
Sbjct 2233 CGATAGTCAAGATCTGTGATTTTGGGCTCTCGAGAAGGATGACAGGTACGGCAGTGAAAG 2292
Query 2144 ACACAGTCTCAGCAGGAACTCCAGAGTGGATGGCTCCTGAACTTATCCGCAATGAGCCCT 2203
| || | | ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 2293 ATACTGAAGCTGCAGGAACTCCTGAGTGGATGGCTCCTGAACTTATCCGCAATGAACCCG 2352
Query 2204 TCTCAGAAAAGTGTGATATCTTCAGCTTAGGTGTAATAATGTGGGAACTCT-GCACTTTA 2262
|| ||||||| | || ||||| ||||| ||||| |||||||||||||| | ||||| ||
Sbjct 2353 TCACAGAAAAAAGCGACATCTTTAGCTTTGGTGTTATAATGTGGGAACT-TAGCACTCTA 2411
Query 2263 ACCA-GACCTTGGGAAGGAGTACCGCCTGAACGGGTTGTT--TATGCTATTGCTTACGAG 2319
||| | ||| || ||||||| || ||| || || ||| | |||| ||||
Sbjct 2412 TCCAAGCCCT-GGAAAGGAGTCCCAAAAGAAAAAGTCATTCATAT-CG-TTGCAAACGAA 2468
Query 2320 GGAGCTCGGCTTGAGATTCCTGAAGGACCGCTGG-GAAAGCTTATTGCAGATTGTTGGAC 2378
||||| ||||| | || ||||||||||| || ||| ||||||||||||||||||| |
Sbjct 2469 GGAGCCCGGCTCAAAATACCTGAAGGACCACTACAGAA-GCTTATTGCAGATTGTTGGTC 2527
Query 2379 AGAACCGGAACAAAGACCGAGTTGCAATGAGATACT 2414
||||| || ||||| ||||| || || ||||||||
Sbjct 2528 GGAACCAGAGCAAAGGCCGAGCTGTAAAGAGATACT 2563
> AT2G31010.1 | Symbols: | Protein kinase superfamily protein
| chr2:13194185-13200128 FORWARD LENGTH=3054
Length=3054
Score = 536 bits (290), Expect = 3e-151
Identities = 645/811 (80%), Gaps = 46/811 (6%)
Strand=Plus/Plus
Query 1627 CAGAATAAGCCATTATTACCATATGAAGAATGGAACATAGACTTCTCTGAGTTGACTGTT 1686
|||||| |||| |||||||| ||| |||||||| |||| |||||||| ||| ||||||||
Sbjct 1744 CAGAATCAGCCTTTATTACCCTATCAAGAATGGGACATTGACTTCTCAGAGCTGACTGTT 1803
Query 1687 GGGACACGTGTCGGAATTGGATTTTTCGGAGAAGTATTCCGTGGGA-TCTGGAACGGGAC 1745
|| || || || || ||||| ||||| || ||||| || ||| ||| | ||||| |||||
Sbjct 1804 GGAACTCGGGTGGGGATTGGTTTTTTTGGTGAAGTTTTTCGT-GGAGTATGGAATGGGAC 1862
Query 1746 AGACGTTGCGATCAAAGTGTTCCTTGAGCAAGACCTTACAGCTGAGAACATGGAGGACTT 1805
||| ||||| |||||| |||| || |||||||| ||||| || || |||||||| || ||
Sbjct 1863 AGATGTTGCAATCAAATTGTTTCTGGAGCAAGATCTTACTGCCGAAAACATGGAAGATTT 1922
Query 1806 CTGCAATGAGATATCAATTCTTAGCCGACTTAGACATCCC-AATGTTATACTGTTCCTT- 1863
||||||||||||||||||||| ||||| || | || ||| |||||| |||| || ||
Sbjct 1923 CTGCAATGAGATATCAATTCTCAGCCGTGTTCGCCA-CCCAAATGTTGTACTATT-TTTG 1980
Query 1864 GGAGCATGCACAAAGCCTCCACGATTAT-CATTGATCACTGAGTACATGGAAATGGGATC 1922
|| ||||||||||| |||||||| |||| || ||||||| ||||||||||| |||||||
Sbjct 1981 GGTGCATGCACAAAACCTCCACGCTTATCCA-TGATCACGGAGTACATGGAGCTGGGATC 2039
Query 1923 TTTGTATTATTTGCTCCACATGAGTGGACaaaaaaaG-AGGTTAAGCTGGCGGAGGAA-G 1980
|||||||||||| ||||||||||||| || || ||| | || ||||||| | ||| |
Sbjct 2040 GTTGTATTATTTGATCCACATGAGTGGTCAGAAGAAGAAACTT-AGCTGGCACA-GAAGG 2097
Query 1981 CTAAAGATGCTGCGTGACATTTGCAGGGGCTTGATGTGCATACACCGGATGGGGATAGTA 2040
|| | |||||| | ||||| |||||||| ||||||||||||||||||||| ||||||
Sbjct 2098 CTCAGGATGCTTAGAGACATCTGCAGGGGTTTGATGTGCATACACCGGATGAAGATAGTC 2157
Query 2041 CACCGTGATATAAAGAGCGCAAACTGTCT-TTTGAGC-AACAAATGGACAGTCAAGATCT 2098
||||| || ||||||| || |||||||| | || | ||| | ||||||||||||||||
Sbjct 2158 CACCGCGACCTAAAGAGTGCCAACTGTCTAGTGGA-CAAAC-ATTGGACAGTCAAGATCT 2215
Query 2099 GTGATTTTGGGCTCTCGAGAATAATGACAG--GCACAACAATGAGAG-ACACAGTC-TCA 2154
||||||||||||| || ||||||||||| | | | |||| ||| || |||| || ||
Sbjct 2216 GTGATTTTGGGCTGTCAAGAATAATGACTGATGAA-AACA-TGA-AGGACACT-TCATCT 2271
Query 2155 GCAGGAACTCCAGAGTGGATGGCTCCTGAACTTATCCGCAATGAGCCCTTCT-CAGA-AA 2212
|| || || ||||||||||||||||| || || || ||||| || |||| | |||| ||
Sbjct 2272 GCTGGGACACCAGAGTGGATGGCTCCAGAGCTCATTCGCAAC-AGGCCTTTTACAGAGAA 2330
Query 2213 AGTGTGATATCTTCAG-CTTAGGTGTAATAATGTGGGAACTCTGCA-CTTTAACC-AGAC 2269
| ||||||||||| || ||| || || |||||||||||||| | || ||||| | | ||
Sbjct 2331 A-TGTGATATCTTTAGTCTTGGG-GTCATAATGTGGGAACTTT-CAACTTTA-CGTAAAC 2386
Query 2270 CTTGGGAAGGAGTACCGCCTGA-ACGGGTTGT-TTATGCTATTGCTTACGA-GGGAGCTC 2326
| ||||||||||| || ||||| | || |||| || |||| |||| | || ||| | |
Sbjct 2387 CATGGGAAGGAGTTCCACCTGAGAAGG-TTGTCTT-TGCTGTTGCACATGAAGGGT-CAC 2443
Query 2327 GGCTTG-AGATTCCTGAAGGACCGCTGGG-AAAGCTTATTGCAGATTGTTGGACAGAACC 2384
| ||| |||||||||| || || || | ||| || ||||||||||||||| |||| ||
Sbjct 2444 GT-TTGGAGATTCCTGATGGTCCACTCAGCAAA-CTAATTGCAGATTGTTGGGCAGAGCC 2501
Query 2385 GGAACAAAGACCGAGTTGC-AATGAGATACT 2414
||| || | || | ||| || ||||||||
Sbjct 2502 TGAAGAACGCCCAAATTGTGAA-GAGATACT 2531
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 122608008692
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5