BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg939260 Length=1666 Score E Sequences producing significant alignments: (Bits) Value AT3G61880.2 | Symbols: CYP78A9 | cytochrome p450 78a9 | chr3:22... 2556 0.0 > AT3G61880.2 | Symbols: CYP78A9 | cytochrome p450 78a9 | chr3:22905868-22907958 REVERSE LENGTH=1847 Length=1847 Score = 2556 bits (1384), Expect = 0.0 Identities = 1540/1617 (95%), Gaps = 4/1617 (0%) Strand=Plus/Plus Query 1 TCTTTTGCTCCTCTGCTTCCATGGCCACCAAGCTCGACACCAGTAGCTTACTTTTGGCCA 60 ||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 49 TCTCTTGTTCCTCTGCATCCATGGCCACCAAGCTCGACACCAGTAGCTTACTTTTGGCCC 108 Query 61 TCTTCTCCAAATGTAGCCTCCTTACTCAAACCAAtcttgctctctctctcctcgtagcct 120 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 109 TCTTGTCCAAATGTAGCCTCCTTACTCAAACCAATCTTGCTCTCTCTCTCCTCGTAGCCT 168 Query 121 cccttgcttctctcgctctttctctcttcttctggtctcATCCCGGAGGACCCGCATGGG 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 169 CCCTAGCTTCTCTCGCTCTTTCTCTCTTCTTCTGGTCTCATCCCGGAGGACCCGCATGGG 228 Query 181 GAAAGTACTTCCTCCATCGCCGCCGTCAAACCACCGTAATACCTGGACCAAGAGGCTTAC 240 |||||||||||||||| |||||||||||||||||||| ||||| || ||||||||||||| Sbjct 229 GAAAGTACTTCCTCCACCGCCGCCGTCAAACCACCGTGATACCCGGGCCAAGAGGCTTAC 288 Query 241 CTTTTGTCGGAAGCATGTCTCTCATGTCAAGTGCTCTGGCTCACCGTTGCATAGCCGCAA 300 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 289 CTTTTGTCGGAAGCATGTCTCTCATGTCAAACACTCTGGCTCACCGTTGCATAGCCGCAA 348 Query 301 CCGCAGAAAAATTTGGAGCCAAACGTTTAATGGCGTTTAGCTTAGGAGAAACTCGCGTGA 360 ||||||| |||||| ||||| |||| |||||||||||||| || |||||||||||||||| Sbjct 349 CCGCAGAGAAATTTAGAGCCGAACGGTTAATGGCGTTTAGTTTGGGAGAAACTCGCGTGA 408 Query 361 TCGTCACGTGCAATCCTGATGTAGCTAAAGAGATTCTAAACAGTCCGGTTTTTGCTGACC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 409 TCGTCACGTGCAATCCTGATGTAGCTAAAGAGATTCTAAACAGTCCGGTTTTCGCTGACC 468 Query 421 GACCGGTTAAGGAATCAGCTTATTCTCTTATGTTTAACCGAGCTATCGGTTTCGCACCTT 480 | ||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||| Sbjct 469 GCCCGGTTAAGGAATCAGCTTATTCCCTCATGTTTAACCGTGCTATCGGTTTCGCTCCTT 528 Query 481 ACGGCGTTTACTGGCGAACCTTGAGAAGAATCGCGTCTAATCATCTTTTTAGTCCGAAAC 540 ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||| Sbjct 529 ACGGCGTTTACTGGCGAACCTTGAGAAAAATCGCGTCTAATCATCTTTTCAGCCCGAAAC 588 Query 541 AGATTAAACGTTCCGAAACGCAGAGACGTGAGATCGCCAATCAGATCGTCAAGTGTCTTG 600 |||||||||||||||||||||||||| | | |||||| ||||| ||||| |||||||| Sbjct 589 AGATTAAACGTTCCGAAACGCAGAGAAGCGTGATCGCGAATCAAATCGTGAAGTGTCTCA 648 Query 601 CAAAACAGAGTAACACCAAAGGTCTCTGTTTTGCACGTGACTTGATCAAAACGGCATCGC 660 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 649 CAAAACAGAGTAACACCAAAGGTCTCTGTTTCGCACGTGACTTGATCAAAACGGCATCGC 708 Query 661 TTAATAACATGATGTGCTCTGTTTTTGGAAAAGAATATGAGCTTGA-GAACGAGCATGAA 719 ||||||||||||||||||||||||| ||||||||||| |||||||| ||| ||||||||| Sbjct 709 TTAATAACATGATGTGCTCTGTTTTCGGAAAAGAATACGAGCTTGAGGAA-GAGCATGAA 767 Query 720 GAAGTGAGTGAGCTACGTGGATTGGTGGAAGAAGGTTATGATTTACTCGGTACACTTAAT 779 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 768 GAAGTGAGTGAGCTACGTGAATTGGTGGAAGAAGGTTATGATTTACTCGGTACACTGAAT 827 Query 780 TGGACCGATCATCTCCCATGGCTCTCGGAGTTTGATCCTCAGAGAATCCGGTCTAGATGC 839 |||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||| Sbjct 828 TGGACCGATCATCTCCCATGGCTCTCTGAATTTGATCCTCAAAGAATCCGGTCTAGATGC 887 Query 840 TCCAATCTCGTACCGAAAGTAAACCGGTTTGTGAACCGGATTATCTCTGACCACCGTGAT 899 || |||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 888 TCTAATCTCGTCCCAAAAGTAAACCGGTTTGTGAACCGGATTATCTCTGACCACCGTGAA 947 Query 900 CAAACTCGTGACTCACCGAGTGACTTCGTTGACGTATTGCTCTCTCTTGATGGTCCTGAT 959 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 948 CAAACTCGTGACTCACCGAGTGACTTCGTTGACGTATTGCTCTCTCTCGATGGTCCTGAT 1007 Query 960 AAATTATCCGACCCTGATATCGTCGCTGTTCTCTGGGAAATGATATTCAGAGGAACTGAC 1019 ||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||| Sbjct 1008 AAATTATCCGACCCTGATATCATCGCCGTTCTATGGGAAATGATATTCAGAGGAACTGAC 1067 Query 1020 ACGGTGGCTGTTTTGATCGAGTGGATTCTTGCTAGGATGGTCCTACATCCAGATATTCAA 1079 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1068 ACGGTGGCTGTTTTGATCGAGTGGATTCTTGCTAGGATGGTCCTTCATCCAGATATTCAA 1127 Query 1080 TCGACGGTTCACAATGAGCTTGATCAAATCGTGGGAAGATCAAGAGCCGTCGAAGAGTCT 1139 |||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct 1128 TCGACGGTTCACAATGAGCTTGATCAAATCGTGGGACGATCAAGGGCTGTCGAAGAGTCT 1187 Query 1140 GACGTGGCATCTTTAG-AGTATCTAACGGCTGTTGTGAAAGAAGTCTTGAGGCTTCACCC 1198 ||||||| ||| ||| | |||||||||||||| |||||||||||||||||||||||||| Sbjct 1188 GACGTGGTGTCTCTAGTA-TATCTAACGGCTGTGGTGAAAGAAGTCTTGAGGCTTCACCC 1246 Query 1199 GCCAGGCCCACTACTCTCTTGGGCCCGTTTAGCAATCACAGATACGATCATCGACGGTTG 1258 |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| | Sbjct 1247 GCCAGGCCCACTACTCTCATGGGCCCGTTTAGCAATCACAGACACGATCATCGACGGTCG 1306 Query 1259 TCGTGTTCCGGCTGGGACCACCGCAATGGTGAACATGTGGGCTATAGCACACGATCCACA 1318 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1307 TCGTGTTCCGGCGGGGACCACCGCAATGGTGAACATGTGGGCTATTGCACACGATCCACA 1366 Query 1319 CGTGTGGGAGAATCCGTTGGAGTTTAAACCCGAACGTTTTGTAGCCAAGGAAGGTGAGGT 1378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1367 CGTGTGGGAGAATCCGTTGGAGTTTAAACCCGAACGTTTTGTAGCCAAGGAAGGTGAGGT 1426 Query 1379 TGAGTTCTCGGTTCTTGGGTCGGATTTGAGGCTAGCACCGTTCGGGTCGGGTCGTCGGGT 1438 ||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct 1427 TGAGTTCTCGGTTCTTGGGTCTGATTTGAGGCTTGCACCGTTCGGGTCCGGTCGTCGGGT 1486 Query 1439 TTGCCCCGGGAAGAATCTTGGTTTGACCACCGTGACGTTTTGGACTGCGACGCTTTTGCA 1498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1487 TTGCCCCGGGAAGAATCTTGGTTTGACCACCGTGACGTTTTGGACTGCGACGCTTTTGCA 1546 Query 1499 TGAGTTTGAATGGCTAACATCGTCCGATGAGAAGACCGTTGACTTGTCCGAGAAACTGAG 1558 ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 1547 TGAGTTTGAATGGCTGACGCCGTCCGATGAGAAGACCGTTGACTTGTCCGAGAAACTGAG 1606 Query 1559 GCTCTCGTGTGAGATGGCTAATCCTCTTGCTGGTAAATTACGCCCCAGGCGTAGTTT 1615 |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct 1607 GCTCTCGTGTGAGATGGCTAATCCTCTTGCTGCTAAATTACGCCCCAGGCGCAGTTT 1663 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 82328893800 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5