BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg939607 Length=467 Score E Sequences producing significant alignments: (Bits) Value AT5G02280.1 | Symbols: | SNARE-like superfamily protein | chr5... 776 0.0 > AT5G02280.1 | Symbols: | SNARE-like superfamily protein | chr5:469298-470285 FORWARD LENGTH=661 Length=661 Score = 776 bits (420), Expect = 0.0 Identities = 454/470 (97%), Gaps = 3/470 (1%) Strand=Plus/Plus Query 1 TTGAAGATTATC---GGAAAACAATGGCGGCGATTTACAGTCTTTACATAATAAACAAAT 57 |||||||||||| |||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct 57 TTGAAGATTATCGGGGGAAAAAAATGGCAGCGATTTACAGTCTTTACATAATTAACAAAT 116 Query 58 CTGGTGGTTTGATATTCTACAAGGATTGTGGAACAAAGGGAAGAATGGATACAAATGATA 117 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 117 CTGGTGGTTTGATATTCTACAAGGATTGTGGAACAAAGGGAAGAATGGATACGAATGATA 176 Query 118 GCTTGAGAGTAGCTAGTTTATGGCATTCAATGCACGCCATTTCTCAGCAGCTTTCACCTG 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 177 GCTTGAGAGTAGCTAGTTTATGGCATTCAATGCACGCCATTTCTCAGCAGCTTTCACCTG 236 Query 178 TCAATGGCTGTTCTGGAATTGAGCTTCTCGAAGCCGACACTTTTGATCTCCATTGTTTCC 237 |||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| Sbjct 237 TCAATGGCTGTTCTGGCATCGAGCTTCTCGAAGCCGACACTTTCGATCTCCATTGTTTCC 296 Query 238 AATCTCTCCCAGGAACAAAGTTCTTTGTGGTTTGTGAACCTGGGACTCCTCACATGGAGA 297 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 297 AGTCTCTCCCAGGAACAAAGTTCTTTGTGGTTTGTGAACCTGGGACTCCTCACATGGAGA 356 Query 298 GCCTCCTTAGATACATTTATGAACTCTACACTGATTATGTCTTGAAGAATCCTTTCTACG 357 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 357 GCCTCCTTAGATACATTTATGAACTCTACACTGATTACGTCTTGAAGAATCCTTTCTATG 416 Query 358 AGATTGAAATGCCTATCCGTTGCGAGCTTTTCGACATCAACCTTACTCAAGCTGTACAGT 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 417 AGATTGAAATGCCTATCCGTTGCGAGCTTTTCGACATCAACCTTACTCAAGCTGTACAGT 476 Query 418 CAGATCGTGTTGCATTGTTAGGACGATGAGCAAGAGATTGATTCTCTGCT 467 ||||||||||||| ||||||||||||||| | |||||||||||||||||| Sbjct 477 CAGATCGTGTTGCTTTGTTAGGACGATGAACTAGAGATTGATTCTCTGCT 526 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22203492974 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5