BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg939780 Length=518 Score E Sequences producing significant alignments: (Bits) Value AT5G03905.1 | Symbols: | Iron-sulphur cluster biosynthesis fam... 736 0.0 > AT5G03905.1 | Symbols: | Iron-sulphur cluster biosynthesis family protein | chr5:1052580-1054274 FORWARD LENGTH=858 Length=858 Score = 736 bits (398), Expect = 0.0 Identities = 470/505 (93%), Gaps = 3/505 (1%) Strand=Plus/Plus Query 15 AAAATC-ATGTCGAGATCTCTGTTGAAACGCGTTGCTCCTTATTTGGCTGGTCGGATTAG 73 |||| | ||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 142 AAAAACTATGTCAAGATCTCTGGTGAAACGCGTTGCTCCTTATTTGGCTGGTCGGATTAG 201 Query 74 AGAAAATCATCGATTGCTTAATTTttcttctgcttctgctctcaaagaagcttcttcttc 133 |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct 202 AGAAAATCATCGATTGCTTAATTTTTCTTCTGCTTCTGCTATCAAAGAAGCATCTTCTTC 261 Query 134 ttcttcttcccaatctgaatcgtcttctATTGATGTCGTCCATCTCAGCGACAATTGTAT 193 |||||| |||||| ||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct 262 TTCTTCGTCCCAACCTGAATCGTCTTCTAATGATGTAGTCCATCTCAGCGACAATTGTAT 321 Query 194 CCGGAGGATGAAAGAGTTACAATCTACTGAGCCGGAAAAGAAACTGCTTCGCTTGGGCGT 253 |||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct 322 CCGGAGAATGAAAGAGTTACAATCTAGTGAGCCGGAAAAGAAAATGCTTCGCTTGGGCGT 381 Query 254 AGAGACGGGAGGGTGTTCTGGTTTCCAGTATGTGTTTGAGCTTGATAATAGAACCAATCC 313 |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| || Sbjct 382 AGAGACAGGAGGATGTTCTGGTTTCCAGTATAAGTTTGAGCTTGATAATAGAACCAACCC 441 Query 314 TGATGACAGGGTTTTCGAGAAGAATGGTGTCAAATTGGTTGTAGATAATGTTTCATACGA 373 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 442 TGATGACAGGGTTTTCGAGAAGAATGGTGTCAAATTGGTTGTCGATAATGTTTCATACGA 501 Query 374 CTTCGTTAAAGGTGCTACGGTTGATTATGTCGAGGAACTGATCCGTGCTGCTTTTGTGGT 433 ||| || ||||||||||| ||||||||| |||||| |||||||||||||||| ||||| Sbjct 502 CTTGGTGAAAGGTGCTACAATTGATTATGAGGAGGAATTGATCCGTGCTGCTTTCGTGGT 561 Query 434 AGCTGAAAACCCGGCCGCAGTAGGTGGATGCAGTTGTAAAAGCTCCTTCATGGTGAAACA 493 ||||| ||||||| ||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct 562 AGCTGTAAACCCGTCCGCAGTGGGTGGGTGCAGTTGTAAAAGCTCCTTCATGGTGAAACT 621 Query 494 GTGAATCATTGACTCAATCTT-CTT 517 |||||||||||||||| ||| ||| Sbjct 622 CTGAATCATTGACTCAA-CTTTCTT 645 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24765434471 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5