BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg939814 Length=1129 Score E Sequences producing significant alignments: (Bits) Value AT5G04170.1 | Symbols: | Calcium-binding EF-hand family protei... 1583 0.0 AT3G10300.3 | Symbols: | Calcium-binding EF-hand family protei... 619 2e-176 > AT5G04170.1 | Symbols: | Calcium-binding EF-hand family protein | chr5:1145431-1147781 FORWARD LENGTH=1475 Length=1475 Score = 1583 bits (857), Expect = 0.0 Identities = 1051/1138 (92%), Gaps = 40/1138 (4%) Strand=Plus/Plus Query 1 ATTGTCAAAACGTTTCATCGATGTCAGGTTACCCTCCGACGAGCCAAGGTTACGGTTACG 60 |||||||| | |||||||||||||||| || |||||||| ||||||||||||||||||| Sbjct 129 ATTGTCAAGTCATTTCATCGATGTCAGGATATCCTCCGACTAGCCAAGGTTACGGTTACG 188 Query 61 GTTACGGCGGCGGAAATCAACCTCCACCACCTCAACCACCTTACTCCTCCGGCGGTAACA 120 ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||| Sbjct 189 GTTACGGCGGCGGTAATCAACCTCCACCACCTCAACCACCTTACTCTTCCGGCGGAAACA 248 Query 121 ATCCTCCTTACGGATCAT---CAACCTCTTCTCCTTACGCTGTACCCTACGGCGGACCTA 177 ||||||| |||||||||| ||||||||||||||||||||||||||||||||| | ||| Sbjct 249 ATCCTCCCTACGGATCATCAACAACCTCTTCTCCTTACGCTGTACCCTACGGCGCATCTA 308 Query 178 AACCAC---CGTCATCCTCTCCCACGCCGCCGTACGGATCTTCAAAGCCTCAATCTTCAT 234 |||||| | ||||||||| | | ||||| || | | | | |||||||| Sbjct 309 AACCACAATCATCATCCTCT-TC-TG-CGCCG-AC-G----T---A--C-GGATCTTCAT 353 Query 235 CATACGGAGCACCGCCTCCTTCAGCTCCATACGCGCCTTCTCCAGGCGACTACAACAAGC 294 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 354 CATACGGAGCACCGCCTCCTTCAGCTCCGTACGCGCCTTCTCCAGGAGACTACAACAAGC 413 Query 295 CGCCAAAGGAGAAACCTTACGGAGGCTACGGAGCTTCCGGCGATTACGGAGCTCCACCGC 354 |||||||||||||||| ||| || | ||| ||| |||||||||||||| | Sbjct 414 CGCCAAAGGAGAAACCATAC---GG--A-GGA------GGC---TACGGAGCTCCACCAC 458 Query 355 CGCCTGGACCTTCAGATTACGGGAGTTACGGTGCTGGACCTCGTCCGACGCCGTCGTCTG 414 || ||||| ||||||||||||| |||||||||||||||||||||||| ||| | |||||| Sbjct 459 CGTCTGGATCTTCAGATTACGGAAGTTACGGTGCTGGACCTCGTCCGTCGCAGCCGTCTG 518 Query 415 GGTACAGTGGAGGATACGGAGCTACTCCGCCGTC-TGGGATTTCTGAATATGGGAGTTAC 473 || || |||||||||||||||||||||| ||| | |||| ||||||| ||||| |||||| Sbjct 519 GGCACGGTGGAGGATACGGAGCTACTCCACCG-CATGGGGTTTCTGACTATGGAAGTTAC 577 Query 474 GGTGGTGCTCCGCCTCGTCCAGCGTCTTCTGGTCAGGGCGGCGGATACGGAGGTTATCCT 533 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 578 GGTGGTGCTCCACCTCGTCCAGCGTCTTCTGGTCACGGTGGCGGATACGGAGGTTATCCT 637 Query 534 CCGCAAGCTTCTTATGGAAGTCCTTTTGCTTCTCTGATTCCGTCAGGTTTTGCTCCGGGA 593 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 638 CCGCAAGCCTCTTATGGAAGTCCTTTTGCTTCTCTGATTCCGTCAGGTTTTGCTCCGGGG 697 Query 594 ACGGATCCGAATATAGTGGCTTGCTTTCAGGCTGCAGATCAAGATGGTAGTGGCTTTATT 653 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 698 ACAGATCCGAATATAGTGGCTTGCTTTCAGGCTGCAGATCAAGATGGTAGTGGCTTTATT 757 Query 654 GATGATAAGGAGCTTCAAGGAGCTCTCTCTTCTTATCAACAGAGATTCAGTATGAGAACT 713 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 758 GATGATAAGGAGCTTCAAGGAGCTCTCTCTTCTTATCAACAGAGATTCAGTATGAGAACT 817 Query 714 GTTCATCTTCTTATGTATCTGTTCACCAATAGCAATGCCATGAAAATCGGACCTAAGGAG 773 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 818 GTTCATCTTCTTATGTATCTATTCACCAATAGCAATGCTATGAAAATCGGACCTAAGGAG 877 Query 774 TTTACTGCACTTTTCTACAGTCTTCAGAACTGGAGGTCCATTTTTGAGAGGTCTGATAAG 833 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 878 TTTACTGCACTTTTCTACAGTCTTCAGAACTGGAGGTCCATTTTTGAGAGGTCTGATAAG 937 Query 834 GACAGGAGTGGCAGAATAGATGTGAATGAGCTGAGAGATGCGCTTTTGAGCCTTGGGTTT 893 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 938 GACAGGAGTGGAAGAATAGATGTGAATGAGCTGAGAGATGCGCTTTTGAGCCTTGGGTTT 997 Query 894 TCGGTTTCTCCTGTGATTTTGGATCTGCTGGTTTCCAAGTTTGACAAAAGCGGAGGCAAG 953 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 998 TCGGTTTCTCCTGTGGTTTTGGATCTGCTGGTTTCCAAGTTTGACAAAAGCGGAGGCAAG 1057 Query 954 AACAGGGCCATCGAATATGACAATTTCATTGAGTGCTGTCTCACTGTTAAGGGCCTGACA 1013 |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1058 AACAGGGCTATCGAATATGACAATTTCATTGAGTGCTGTCTCACTGTTAAGGGGCTGACA 1117 Query 1014 GAGAAGTTCAAGGAGAAGGACACAGCGTACTCAGGCTCAGCTACTTTCAACTACGAAAGC 1073 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1118 GAGAAGTTCAAGGAGAAGGACACAGCATACTCAGGCTCAGCTACTTTCAACTACGAAAGC 1177 Query 1074 TTCATGCTCACCGTCCTCCCCTTCCTCATCGCATAAGTTTTTA--ACGGTAACCCGTT 1129 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1178 TTCATGCTCACCGTCCTCCCCTTCCTCATCGCATAAGTTTTTTTTACGGTAACCCGTT 1235 > AT3G10300.3 | Symbols: | Calcium-binding EF-hand family protein | chr3:3186314-3188205 FORWARD LENGTH=1264 Length=1264 Score = 619 bits (335), Expect = 2e-176 Identities = 520/610 (85%), Gaps = 10/610 (2%) Strand=Plus/Plus Query 501 TCTGGTCAGGGCGGCGGATACGGAGGTTATCCTCCGCAAGCTTCTTATGGAAGTCCTTTT 560 ||||| || || || || ||||||| | ||||||||||||||||||||||||||| ||| Sbjct 522 TCTGGACATGGAGGAGGTTACGGAGCTCCTCCTCCGCAAGCTTCTTATGGAAGTCCGTTT 581 Query 561 GCTTCTCTGATTCCGTCAGG-TTTTGCTCCGGGAACGGATCCGAATATAGTGGCTTGCTT 619 || |||||| ||||||| || ||| |||| ||||| |||||||| || |||||||| || Sbjct 582 GCGTCTCTGGTTCCGTC-GGCGTTTCCTCCCGGAACAGATCCGAACATTGTGGCTTG-TT 639 Query 620 T-CAGGCTGCAGATCAAGATGGTAGTGGCTTTATTGATGATAAGGAGCTTCAAGGAGCTC 678 | || ||||| |||| || |||||| || || ||||||||||||||||||||||||| Sbjct 640 TCCAAGCTGCGGATCGGGACAATAGTGGATTCATCGATGATAAGGAGCTTCAAGGAGCTC 699 Query 679 TCTCTTCTTATCAA-CAGAGATTCAGTATGAGAACTGTTCATCTTCTTATGTATCTGTTC 737 | ||||| ||| || ||||| ||||| || |||||||||||||| ||||||||||| ||| Sbjct 700 TATCTTCGTAT-AATCAGAGCTTCAGCATAAGAACTGTTCATCTCCTTATGTATCTATTC 758 Query 738 ACCAATAGCAATGCCATGAAAATCGGACCTAAGGAGTTTACTGCACTTTTCTACAGTCTT 797 ||||| ||||||| || ||| || ||||| || ||||||||| ||||||||| |||||| Sbjct 759 ACCAACAGCAATGTCAGGAAGATTGGACCAAAAGAGTTTACTTCACTTTTCTTTAGTCTT 818 Query 798 CAGAACTGGAGGTCCATTTTTGAGAGGTCTGATAAGGACAGGAGTGGCAGAATAGATGTG 857 ||||| |||||||| || |||||||||| |||||||||||| || || ||||||||| Sbjct 819 CAGAATTGGAGGTCTATCTTTGAGAGGTTTGATAAGGACAGAAGCGGTAGAATAGATACA 878 Query 858 AATGAGCTGAGAGATGCGCTTTTGAGCCTTGGGTTTTCGGTTTCTCCTGTGATTTTGGAT 917 || |||||||||||||| || |||||||||||||||| ||||||||||||||||||||| Sbjct 879 AACGAGCTGAGAGATGCACTCATGAGCCTTGGGTTTTCTGTTTCTCCTGTGATTTTGGAT 938 Query 918 CTGCTGGTTTCCAAGTTTGACAAAAGCGGAGGCAAGAACAGGGCCATCGAATATGACAAT 977 ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct 939 CTGCTGGTTTCAAAGTTTGACAAAAGCGGAGGCAGGAACAGGGCTATCGAATATGACAAT 998 Query 978 TTCATTGAGTGCTGTCTCACTGTTAAGGGCCTGACAGAGAAGTTCAAGGAGAAGGACACA 1037 ||||| ||||| ||| | ||||| ||||| || || |||||||||||||||||||| || Sbjct 999 TTCATCGAGTGTTGTTTGACTGTAAAGGGGCTCACCGAGAAGTTCAAGGAGAAGGATACG 1058 Query 1038 GCGT-ACTCAGGCTCAGCTACTTTCAACTACGA-AAGCTTCATGCTCACCGTCCTCCCCT 1095 |||| | ||||||||||||| |||||| ||||| || |||||||||||| || | || | Sbjct 1059 GCGTTA-TCAGGCTCAGCTATTTTCAATTACGAGAA-CTTCATGCTCACTGTTTTACCAT 1116 Query 1096 TCCTCATCGC 1105 ||||| |||| Sbjct 1117 TCCTCGTCGC 1126 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55371201135 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5