BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg939957 Length=1019 Score E Sequences producing significant alignments: (Bits) Value AT5G05340.1 | Symbols: | Peroxidase superfamily protein | chr5... 1659 0.0 AT5G35111.1 | Symbols: | pseudogene, similar to peroxidase 6, ... 104 2e-21 AT1G47705.1 | Symbols: | pseudogene, similar to peroxidase 6, ... 76.8 4e-13 > AT5G05340.1 | Symbols: | Peroxidase superfamily protein | chr5:1578951-1580875 REVERSE LENGTH=1222 Length=1222 Score = 1659 bits (898), Expect = 0.0 Identities = 979/1019 (96%), Gaps = 1/1019 (0%) Strand=Plus/Plus Query 1 TCAAGTCTTTGTTTTAACCT-ACAATGGCTTCAAATCAACTTACTGCCATTCTAGTTCTC 59 |||||||||||||||||||| ||||||||||||||| |||||| | | |||||||||||| Sbjct 33 TCAAGTCTTTGTTTTAACCTAACAATGGCTTCAAATAAACTTATTTCGATTCTAGTTCTC 92 Query 60 GTACTTACACTTTTACTCCAAGGTAATAACAATAACGTCGTCGAAGCACAACTCACTACT 119 ||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct 93 GTAGTTACACTTTTACTCCAAGGTGATAACAATTACGTCGTCGAAGCACAACTCACGACT 152 Query 120 AATTTCTACTCAACCTCTTGCCCTAACCTCCTCTCCACCGTCCAAAGCGCCGTTAAATCT 179 || |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct 153 AACTTCTACTCAACCTCTTGCCCCAACCTCCTCTCCACCGTCCAAACCGCCGTTAAATCT 212 Query 180 GCCGTTAACAGCGAGGCTCGAATGGGTGCATCTATCCTCCGTCTCTTCTTCCACGATTGC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 213 GCCGTTAACAGCGAGGCTCGAATGGGTGCATCTATCCTCCGTCTCTTCTTCCACGATTGC 272 Query 240 TTCGTCAACGGATGTGACGGTTCGATTCTGTTAGATGACACGTCGAGCTTCACTGGAGAA 299 || ||||||||||| |||||||||||||| |||| || ||||| |||||||| |||||| Sbjct 273 TTTGTCAACGGATGCGACGGTTCGATTCTACTAGACGATACGTCAAGCTTCACAGGAGAA 332 Query 300 CAAAACGCGGCTCCAAACCGCAATTCAGCTCGTGGGTTTAATGTGATCGACAACATCAAA 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 333 CAAAACGCGGCTCCAAACCGCAATTCAGCTCGTGGGTTTAATGTGATCGACAACATCAAA 392 Query 360 TCAGCGGTTGAGAAAGCATGTCCCGGGGTTGTGTCTTGTGCTGATATCTTAGCCATTGCA 419 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 393 TCAGCGGTTGAGAAAGCATGTCCCGGGGTTGTGTCTTGTGCTGATATCTTAGCCATTGCT 452 Query 420 GCTAGAGACTCCGTCGTAGTACTTGGAGGGCCGAATTGGAATGTGAAAGTAGGAAGAAGA 479 ||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||| Sbjct 453 GCTAGAGACTCCGTCGTAGCCCTTGGAGGACCGAACTGGAATGTGAAAGTAGGAAGAAGA 512 Query 480 GATGCAAGAACGGCGAGTCAAGCGGCAGCGAATAGTAACATTCCGGCGCCGACTTCGAGT 539 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 513 GATGCAAGAACGGCGAGTCAAGCGGCAGCGAATAGTAACATTCCGGCACCGACTTCGAGT 572 Query 540 CTGAGCCAACTCATTAGTAGTTTCAGTGCTGTTGGACTCTCCACCAGAGATATGGTTGCT 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 573 CTGAGCCAACTCATTAGTAGTTTCAGTGCTGTTGGACTCTCCACCAGAGATATGGTTGCT 632 Query 600 CTCTCCGGCGCACACACGATCGGACAATCCCGTTGCACGAACTTCCGAGCGAGAATCTAC 659 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 633 CTCTCTGGCGCACACACGATCGGACAATCCCGTTGCACGAACTTCCGAGCGAGAATCTAC 692 Query 660 AACGAGACAAACATCAACGCCGCCTTCGCCACCACACGTCAACGAACTTGCCCTAGAGCC 719 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 693 AACGAGACAAACATCAATGCCGCCTTCGCCACGACACGTCAACGAACTTGCCCTAGAGCC 752 Query 720 ACCGGTTCCGGCGACGGAAACCTAGCTCCACTAGACGTCACCACGGCTGCCTCTTTCGAC 779 |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 753 TCCGGTTCCGGCGACGGAAACCTAGCTCCACTAGACGTCACCACGGCAGCTTCTTTCGAC 812 Query 780 AACAACTACTTCAAGAATCTCATGACTCAGAGAGGTCTCCTCCATTCCGACCAAGTGCTC 839 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 813 AACAACTACTTCAAGAATCTCATGACTCAGAGAGGGCTCCTCCATTCCGACCAAGTGCTC 872 Query 840 TTCAACGGCGGCTCCACTGACTCTATCGTCCGTGGATACAGCAACAATCCGTCGAGCTTT 899 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 873 TTCAACGGCGGCTCTACTGACTCCATCGTCCGTGGATACAGCAACAATCCGTCGAGCTTT 932 Query 900 AACTCCGACTTCGCGGCGGCGATGATAAAAATGGGTGATATCAGCCCGTTGACTGGTAGT 959 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 933 AACTCTGACTTCACGGCGGCGATGATAAAAATGGGTGATATCAGCCCGTTGACTGGTAGT 992 Query 960 AGCGGTGAGATCCGCAAGGTTTGCGGGAGGACCAACTGATTCAAATCTCCTCCACGTGT 1018 |||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct 993 AGCGGTGAAATCCGCAAGGTTTGCGGGAGGACCAACTGATTCAAGTCTACTCCACGTGT 1051 > AT5G35111.1 | Symbols: | pseudogene, similar to peroxidase 6, blastp match of 72% identity and 1.1e-17 P-value to GP|5002334|gb|AAD37423.1|AF149281_1|AF149281 peroxidase 6 {Phaseolus vulgaris} | chr5:13366072-13367241 REVERSE LENGTH=1170 Length=1170 Score = 104 bits (56), Expect = 2e-21 Identities = 69/75 (92%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 441 CTTGGAGGGCCGAATTGGAATGTGAAAGTAGGAAGAAGAGATGCAAGAACGGCG-AGTCA 499 |||||||||| ||||||| ||||||||||||||||||||||||||||||||| | ||||| Sbjct 564 CTTGGAGGGCTGAATTGG-ATGTGAAAGTAGGAAGAAGAGATGCAAGAACGGGGGAGTCA 622 Query 500 AGCGGCAGCGAATAG 514 | |||| |||||||| Sbjct 623 AACGGCGGCGAATAG 637 > AT1G47705.1 | Symbols: | pseudogene, similar to peroxidase 6, similar to peroxidase GB:P00434 GI:464365 from (Brassica rapa); blastp match of 60% identity and 7.0e-14 P-value to GP|5002334|gb|AAD37423.1|AF149281_1|AF149281 peroxidase 6 {Phaseolus vulgaris} | chr1:17549377-17550724 REVERSE LENGTH=1348 Length=1348 Score = 76.8 bits (41), Expect = 4e-13 Identities = 68/80 (85%), Gaps = 6/80 (8%) Strand=Plus/Plus Query 441 CTTGGAGGGCCGAATTGGA-ATGTGAAAGTAGGAAGAAGAGATGCAAGAACGGCG-AGTC 498 |||||||| | ||||| | ||||||||||||||||||||||||||||||||| | |||| Sbjct 511 CTTGGAGGACTGAATT-AATATGTGAAAGTAGGAAGAAGAGATGCAAGAACGGGGGAGTC 569 Query 499 AAGCGGC-AGCGAATA-GTA 516 || || | | |||||| ||| Sbjct 570 AAACGACGA-CGAATATGTA 588 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49932742118 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5