BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg940337 Length=1813 Score E Sequences producing significant alignments: (Bits) Value AT5G08500.1 | Symbols: | Transmembrane CLPTM1 family protein |... 3009 0.0 AT5G23575.1 | Symbols: | Transmembrane CLPTM1 family protein |... 1744 0.0 > AT5G08500.1 | Symbols: | Transmembrane CLPTM1 family protein | chr5:2748193-2751771 FORWARD LENGTH=2022 Length=2022 Score = 3009 bits (1629), Expect = 0.0 Identities = 1752/1813 (97%), Gaps = 2/1813 (0%) Strand=Plus/Plus Query 1 GAAAGCATCTTTCTGCGAATATGGCGCCTCCGGCAAGTGAAACAGCTGCGGTGGTTGACG 60 ||| ||||||| |||||| ||||||| | |||||| |||||||||| ||||| ||||| | Sbjct 49 GAAGGCATCTTCCTGCGATTATGGCGTCGCCGGCAGGTGAAACAGCAGCGGTTGTTGAGG 108 Query 61 GCGGTGATGGGCAGCAGCAACGACAAGCTGGTGGGTTTGGGCAGGCAATTACCGGAATCA 120 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 109 GCGGAGATGGGCAGCAGCAACGACAAGCTGGTGGGTTTGGGCAGACAATTACCGGAATCA 168 Query 121 TTAGAATCGCCGTCTTCTGCTACTTTGCTTCTAAGTTCTTTTCTCCGAAACAAAAACCAT 180 | ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| | Sbjct 169 TAAGAATCGCCGTCTTCTGTTACTTTGCTTCTAAGTTCTTTTCTCCCAAACAAAAACC-T 227 Query 181 -CGGATCCTTCTAAGCCTTCTCATCTTATGTCCAATCTCTTTCAGAGGGGAGAGCCCATG 239 |||||||||| |||||| ||||||| ||||||||||| ||||||||||| |||||||| Sbjct 228 GCGGATCCTTCCAAGCCTACTCATCTCATGTCCAATCTATTTCAGAGGGGCGAGCCCATA 287 Query 240 GATATGTGGTTTTATCTTTCGGAGCATGAGAAATTCAATGACTTTGGCAATGAAGGTGCG 299 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 288 GATATGTGGTTTTATCTTTCGGAGCATGAGAAATTCAATGACTTCGGCAATGAAGGTGCG 347 Query 300 CTTATTTGGCACGAGACAAACATACCTTATGCTGTGTGGAAGCCAGAGAGCACTAGGACC 359 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 348 CTTATTTGGCATGAGACAAACATACCTTATGCTGTGTGGAAACCAGAGAGCACTAGGACC 407 Query 360 TTGTCAATGACATATTATCCATCCGAGGCACTGAAGAATAATGGAAGTCTGTATGCTCAT 419 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 408 TTGTCAATGACGTACTATCCTTCCGAGGCACTGAAGAATAATGGAAGTCTGTATGCTCAT 467 Query 420 GTCTTCTTTGCTCGATCTGGTTATCCTATAGATCCTAGTGATCCTGAATACCAGCCTCTT 479 ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 468 GTCTTCTTTGCTCTATCTGGTTATCCTATAGATCTTAGTGATCCTGAATACCAGCCTCTC 527 Query 480 AACTGCTTTGGCAGGACACACCCCATTGCAACTTACTTACCAAAGCGAAAAGCAGATAAG 539 ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 528 AACTGCTTTGGCAGGACTCACCCTGTTGCAACTTACTTACCAAAGCGAAAAGCAGATAAG 587 Query 540 AAGAAGAGTCTGTTGGGAAATCCCAAAGACGATGATGAATCCAATGTTGAAGTTGAGGAG 599 |||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||| Sbjct 588 AAGAAGAGTCTGTTGGGAAATCCCAAAGACTCTGATGAATCCCATGTGGAAGTTGAGGAG 647 Query 600 GTTGATGGTAAGGACTCGGATCTCAAGGATGAGGGACCTGTGGAATGGGTTTCCTACTGG 659 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 648 GTTGATGGTAAGGACTCGGATCTCAAGGATGAGGGCCCTGTGGAATGGGTATCCTACTGG 707 Query 660 AAACCAAATGTCACAATTAACCTAGTCGATGACTTTACTCGCTATCCACAGCATGGTGTA 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 708 AAACCAAATGTCACAATTAACCTAGTCGATGACTTTACTCGCTATCCACAGCATGGTGTA 767 Query 720 CCACCAAACATTGATCCTTACTTACTGGTGGAACCTAGTACAGTAAACTACTACCCTACA 779 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 768 CCACCAAACATTTATCCTTACTTACTGGTGGAACCTAGTACAATAAACTACTACCCTACA 827 Query 780 GTTTTCTTTAATGAGTTTTGGCTGCTAAGGGACAAGTTGATTTTAATCAATGAGACGGTC 839 |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 828 GTTTTCTTCAATGAGTTTTGGTTGCTAAGGGACAAGTTGATTTTAATCAATGAGACGGTC 887 Query 840 TCAGAGCTGCCACTTAATCTGGAAGTAAGCCCCATAAGCATGACAAAGTGGCAGCTGTTT 899 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 888 TCAGAGCTGCCACTTAATCTGGAAGTAAGCCCCATAAGCATGACAAAGTGGCAGCTGTTT 947 Query 900 CAGCAGATTGATCAGTCTTTTCAGATTCACCGTAGCTATGGAAGCATGCTTGATGGTGAA 959 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 948 CAGCAGATTGATCAGTCTTTCCAGATTCACCGTAGCTATGGAAGCATGCTTGATGGTGAA 1007 Query 960 TCTGACGAACTAAAGAGGGTGTTTTTGGAAGGAAATCCCTATCTCTTGGGTGTCACAATG 1019 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| Sbjct 1008 TCTGACGAACTAAAGAGGGTGTTTTTGGAAGGAAATCCCTATCTGTTGGGCGTCACTATG 1067 Query 1020 TTTGTTTCGATGCTTCATTCTGTATTTGACTTCCTTGCATTCAAAAATGATATCCAGTTT 1079 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1068 TTTGTTTCGATGCTTCATTCTGTATTCGACTTCCTTGCATTCAAAAATGATATCCAGTTT 1127 Query 1080 TGGAACAAGAACAAATCTATGGAAGGACTGTCTGCGAAGTCTGTCGTACTAAACTTTATC 1139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1128 TGGAACAAGAACAAATCTATGGAAGGACTGTCTGCGAAGTCTGTCGTACTAAACTTTATC 1187 Query 1140 TGTCAGTTTATCATCTTCCTCTACCTGCTTGACAACGACACTTCTTGGATGATACTGGCT 1199 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1188 TGTCAGTTTATCATCTTCCTCTACCTGCTTGACAACGACACTTCATGGATGATACTGGCT 1247 Query 1200 AGCTCCGGAGTTGGTGTCTGCATCGAGTTCTGGAAAATAGGGAAAGCCATGCGGATTGAG 1259 ||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 1248 AGCTCTGGAGTTGGTGTCTGCATCGAGTTCTGGAAAATTGGGAAAGCCATGCGCATTGAG 1307 Query 1260 GTTGATCGAAGTGGGATGATTCCAAGATTGAGGTTCCACGACCGTGAATCCTATGCAAGC 1319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1308 GTTGATCGAAGTGGGATGATTCCAAGATTGAGGTTCCACGACCGTGAATCCTATGCAAGC 1367 Query 1320 AACAAGACCAAGGAGTATGACGACATCGCCATTAAATTCTTATCCTATGTGCTCCTCCTC 1379 |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 1368 AACAAGACCAAGGAGTATGACGACATTGCCATCAAATTCTTATCCTATGTGCTCCTCCTT 1427 Query 1380 CATGTTGTGGGTTTCTCCATATATTCACTTGCCTATGAACGCCACAAGAGCTGGTACTCA 1439 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1428 CTTGTTGTGGGTTTCTCCATATATTCACTTGCCTATGAACGCCACAAGAGCTGGTACTCA 1487 Query 1440 TGGATCCTATCTTCACTAACGAGCTGCGTCTACATGTTTGGTTTCATAATGATGTGTCCT 1499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1488 TGGATCCTATCTTCACTAACGAGCTGCGTCTACATGTTTGGTTTCATAATGATGTGTCCT 1547 Query 1500 CAATTGTTCATCAACTATAAGCTGAAGTCAGTAGCACATTTACCATGGAGGCAAATGACA 1559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1548 CAATTGTTCATCAACTATAAGCTGAAGTCAGTAGCACATTTACCATGGAGGCAAATGACA 1607 Query 1560 TATAAGTTCCTCAACACAATCATCGACGATCTCTTTGCTTTTGTCATCAAAATGCCAATG 1619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1608 TATAAGTTCCTCAACACAATCATCGACGATCTCTTTGCTTTTGTCATCAAAATGCCAATG 1667 Query 1620 CTGCATCGCATTTCTGTCTTCCGAGATGATGTGATATTCTTAATATACTTGTACCAGAGA 1679 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1668 TTGCATCGCCTTTCTGTCTTCCGAGATGATGTGATATTCTTAATATACTTGTACCAGAGA 1727 Query 1680 TGGGTTTATCCTGTGGACAGAACACGTGTCAACGAATTTGGTTTTGGAGGTGAGGATGAG 1739 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| Sbjct 1728 TGGGTTTATCCTGTGGACAAAACACGTGTCAACGAGTTTGGTTTTGGAGGTGAGGATGAG 1787 Query 1740 TCTGTGGATACAAAGAAGATCTCTGACCAAGAAGATGACAAGAAAACAAACTAATTAGCT 1799 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1788 TCTGTGGATACAAAGAAGATCTCTGACCAAGAAGATGACAAGAAAACAAACTAATTAGCT 1847 Query 1800 TTGTGCTTTTGTT 1812 ||||||||||||| Sbjct 1848 TTGTGCTTTTGTT 1860 > AT5G23575.1 | Symbols: | Transmembrane CLPTM1 family protein | chr5:7946310-7950253 FORWARD LENGTH=2247 Length=2247 Score = 1744 bits (944), Expect = 0.0 Identities = 1458/1706 (85%), Gaps = 35/1706 (2%) Strand=Plus/Plus Query 108 ATTACCGGAATCATTAGAATCGCCGTCTTCTGCTACTTTGCTTCTAAGTTCTTTTCTCCG 167 ||| |||| ||| |||||||||||||||| || || ||||||||||||||||||||||| Sbjct 347 ATTTCCGGCATCGTTAGAATCGCCGTCTTTTGGTATTTTGCTTCTAAGTTCTTTTCTCCT 406 Query 168 AAACAAAAACC-ATCGGATCCTTCTAAGCCTTCTCATCTTATGTCCAATCTCTTTCAGAG 226 || || ||||| || |||||| || || ||||| || ||| | |||||||| || | Sbjct 407 AAGCAGAAACCTAT-GGATCCCACTGCTCCGTCTCAGCTCATGACTAATCTCTTCCACAA 465 Query 227 GGGAGAGCCCA-TGGATATGTGGTTTTATCTTTCGGAGCATGAGAAATTCAATGACTTTG 285 ||| || || ||||||||||||||||||| || ||||| ||||| ||||||||||||| Sbjct 466 GGGCGA-ATCATTGGATATGTGGTTTTATCTATCAGAGCAGGAGAAGTTCAATGACTTTG 524 Query 286 GCAATGAAGGTGCGCTTAT-TTGGCACGAGACAAACATACCTTATGCTGTGTGGA-AGCC 343 ||||||| |||||| ||| |||||| ||||| || |||||||||||||| |||| | || Sbjct 525 GCAATGATCGTGCGC-TATATTGGCATGAGACGAATATACCTTATGCTGTATGGACA-CC 582 Query 344 AGAGAGCACTAGGACCTTGTCAATGACATATTATCCATCCGAGGCACTGA-AGAATAATG 402 |||||| | ||||||| |||| | || ||||||||||| ||| |||| | ||||||||| Sbjct 583 AGAGAGTATTAGGACCAAGTCACTTACGTATTATCCATCTGAGACACT-ACAGAATAATG 641 Query 403 GAAGTCTGTATGCTCATGTCTTCTTTGCTCGATCTGG-TTATCCTATAGATCCTAGTGAT 461 ||||||||||||||||| |||| |||||||||||||| || ||| || || || | |||| Sbjct 642 GAAGTCTGTATGCTCATATCTTTTTTGCTCGATCTGGATT-TCCCATTGACCCCACTGAT 700 Query 462 CCTGAATACCAGCCTCTTAACT-GCTTTGGCAGGACACACCCCATTGCAACTTACTTACC 520 |||||||| || |||||||| | | ||| | ||||| || | | || |||||||| || Sbjct 701 CCTGAATATCAACCTCTTAA-TAGTTTTAGTAGGACGCATGCTGTGGCGACTTACTTTCC 759 Query 521 AAAGC-GAAAAGCAGATAAGAAGAAGAGTCTGTTGGGAAATCCCAAAGACGATGATGAAT 579 ||||| ||||| | |||||||||||||||| ||||| | |||||||||| |||||||| Sbjct 760 AAAGCAGAAAA-AAAATAAGAAGAAGAGTCTCTTGGGCAGTCCCAAAGACTCTGATGAAT 818 Query 580 CC-AATGTTGAAGTTGAGGAGGTT-GATGGTAAGGACTCGGATCTCAAGGATGAGGGACC 637 || || |||||||||| | ||| || | |||| | || |||| |||||| |||| || Sbjct 819 CCGAA-CCTGAAGTTGAGAAAGTTGGA-GATAAGAAATCAGATCCCAAGGAAGAGGTCCC 876 Query 638 TGTGGAATGGGT-TTCCTACTGGAAACCAAATGTCACAATTAACCTAGTCGATGACTTTA 696 |||||||||| | | ||| ||||||||| |||||||| |||||||| || ||||| |||| Sbjct 877 TGTGGAATGGATATCCCT-CTGGAAACCTAATGTCACGATTAACCTGGTTGATGATTTTA 935 Query 697 CTCGCTATCCACAGCATGGTGTACCACCAAACATTGATCCTTACTTACTGGTGGAACCTA 756 ||| |||| ||||| ||||||||||||||||||||| |||| |||||||||| ||||| | Sbjct 936 CTCACTATTCACAGAATGGTGTACCACCAAACATTGCTCCTCACTTACTGGTAGAACCGA 995 Query 757 GTACAGTAAACTACTACCCTACAGTTTTCTTTAATGAGTTTTGGCTGCTAAGGGACAAGT 816 |||| ||| ||||| |||||| ||| ||| |||||||||||||||||||||||||||| Sbjct 996 CCACAGGAAATTACTATCCTACAATTTACTTCAATGAGTTTTGGCTGCTAAGGGACAAGT 1055 Query 817 TGATTTTAATCAATGAGACGGTCTCAGAGCTGCCACTTAATCTGGAAGTAAGCCCCATAA 876 | ||| | |||||||||| |||||||| || ||||| ||||||||| |||| ||||||| Sbjct 1056 TCATTCCAGTCAATGAGACAGTCTCAGAACTACCACTAAATCTGGAAATAAGTCCCATAA 1115 Query 877 GCATGACAAAGTGGCAGCTGTTTCAGCA-GATTGATCAGTCTTTTCAGATTCACCGTAGC 935 |||||| |||||||| ||||||||||| | ||||||| ||||| ||||| || |||||| Sbjct 1116 GCATGATGAAGTGGCAACTGTTTCAGCAAG-TTGATCAATCTTTCCAGATGCAGCGTAGC 1174 Query 936 TATGGAAGCATGCTTGATGGTGAATCTGACGAACTAAAGAGGGTGTTTTTGGAAGGAAAT 995 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct 1175 TATGGAAGCATGCTTGACGGTGAATCTGACGAACTAAAGAAGGTGTTTTTGGAAGGAAAT 1234 Query 996 CCCTATCTCTTGGGTG-TCACAATGTTTGTTTCGATGCTTCATTCTGTATTTGACTTCCT 1054 |||||||| ||||| | |||| ||||||||||||||||||||||| || || |||||||| Sbjct 1235 CCCTATCTTTTGGG-GATCACGATGTTTGTTTCGATGCTTCATTCAGTGTTCGACTTCCT 1293 Query 1055 TGCATTCAAAAATGATATCCAGTTTTGGAACAAGAACAAATCTATGGAAGGACTGTCTGC 1114 |||||||||||||||||||| || |||||||| || |||||||||||||| |||||||| Sbjct 1294 GGCATTCAAAAATGATATCCAATTCTGGAACAAAAATAAATCTATGGAAGGGCTGTCTGC 1353 Query 1115 GAAGTCTGTCGTACTAAACTTTATCTGTCAGTTTATCATCTTCCTCTACCTGCTTGACAA 1174 |||||||| ||||| |||||||||||||||||| |||||||||||||| |||||||||| Sbjct 1354 AAAGTCTGTTGTACTGAACTTTATCTGTCAGTTTGTCATCTTCCTCTACTTGCTTGACAA 1413 Query 1175 CGACACTTCTTGGATGATACTGGCTAGCTCCGGAGTTGGTGTCTGCATCGAGTTCTGGAA 1234 ||||||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct 1414 CGACACTTCATGGATGATACTGGCTAGTTCCGGAGTCGGTGTCTGCATTGAGTTCTGGAA 1473 Query 1235 AATAGGGAAAGCCATGCGGATTGAGGTTGATCGAAGTGGGATGATTCCAAGATTGAGGTT 1294 |||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||||| Sbjct 1474 AATAGGGAAAGCCATGCGCATAGAGGTTGATCGAAGTGGAATGATTCCAAGGTTGAGGTT 1533 Query 1295 CCACGACCGTGAATCCTATGCAAGCAACAAGACCAAGGAGTATGACGACATCGCCATTAA 1354 ||| || |||||||| ||||||||||| || |||||||||||||| ||||| ||||| || Sbjct 1534 CCATGATCGTGAATCGTATGCAAGCAATAAAACCAAGGAGTATGATGACATTGCCATCAA 1593 Query 1355 ATTCTTATCCTATGTGCTCCTCCTCCATGTTGTGGGTTTCTCCATATATTCACTTGCCTA 1414 |||||||||||||||||||||||||| ||| | || || ||||||||||| || || || Sbjct 1594 ATTCTTATCCTATGTGCTCCTCCTCCTTGTCATTGGCTTGTCCATATATTCTCTCGCTTA 1653 Query 1415 TGAACGCCACAAGAGCTGGTACTCATGGATCCTATCTTCACTAACGAGCTGCGTCTACAT 1474 ||||||||||||||||||||| || ||||| |||||||||||||| ||||| |||||||| Sbjct 1654 TGAACGCCACAAGAGCTGGTATTCTTGGATACTATCTTCACTAACAAGCTGTGTCTACAT 1713 Query 1475 GTTTGGTTTCATAATGATGTGTCCTCAATTGTTCATCAACTATAAGCTGAAGTCAGTAGC 1534 ||| |||||||| |||||||||||||| | ||||||||||| ||||| || ||||| || Sbjct 1714 GTTCGGTTTCATCATGATGTGTCCTCAGCTATTCATCAACTACAAGCTTAAATCAGTGGC 1773 Query 1535 ACATTTACCATGGAGGCAAATGACATATAAGTTCCTCAACACAATCATCGACGATCTCTT 1594 ||||||||||||||| || ||||| || |||||||||||||| || |||||||||||||| Sbjct 1774 ACATTTACCATGGAGACAGATGACTTACAAGTTCCTCAACACCATTATCGACGATCTCTT 1833 Query 1595 TGCTTTTGTCATCAAAATGCCAATGCTGCATCG-CATTTCTGTCTTCCGAGATGATGTGA 1653 ||| ||||||||||||||||| || | ||||| | ||||||| ||| |||||||||||| Sbjct 1834 TGCCTTTGTCATCAAAATGCCGATTTTACATCGAC-TTTCTGTATTCAGAGATGATGTGA 1892 Query 1654 TATTCTTAATATACTTGTACCAGAGATGGGTTTATCCTGTGGACA-GAACACGTGTCAAC 1712 ||||||| |||||||| ||||| || |||||||| || ||||| | || ||||||| ||| Sbjct 1893 TATTCTTGATATACTTATACCAAAGGTGGGTTTACCCAGTGGATAAGA-CACGTGTGAAC 1951 Query 1713 GAATTTGGTTTTGGAGGTGAGGATGAGTCTGTGGATACA-AAGAAGATCTCTGACCAAGA 1771 || || |||||||||||||||||||| ||| || | | ||| |||| |||| |||| Sbjct 1952 GAGTTCGGTTTTGGAGGTGAGGATGAAACTGCAGAGA-AGAAGTTGATCACTGAGAAAGA 2010 Query 1772 AGATGA---CAAGAAAACAAACTAAT 1794 ||| || ||||||||||||||||| Sbjct 2011 AGAAGAAGACAAGAAAACAAACTAAT 2036 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 89708373915 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5