BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg940741 Length=1205 Score E Sequences producing significant alignments: (Bits) Value AT5G12470.1 | Symbols: | Protein of unknown function (DUF3411)... 1906 0.0 > AT5G12470.1 | Symbols: | Protein of unknown function (DUF3411) | chr5:4044622-4047436 REVERSE LENGTH=1635 Length=1635 Score = 1906 bits (1032), Expect = 0.0 Identities = 1148/1203 (95%), Gaps = 11/1203 (1%) Strand=Plus/Plus Query 12 TCTGTAGCATCAATGGCAATCGCTTCATGCTTCTTCTGTGTTCCAACACCCAACACATCT 71 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || Sbjct 135 TCTGTAGCATCAATGGCAATCGCTTCCTGCTTCTTCTGTGTTCCAACACCGAACACAGCT 194 Query 72 ATCTCTGAATCCAATCTCACATGGCCTCACCTTGCTTCGTTTCCTAGACTCTCTTCCTCT 131 ||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||| Sbjct 195 ATCTCTGAATCCAATCTGACATGGCCTCACATCGCTTCGTTTCCTAGACTCTCTTCATCT 254 Query 132 TCCTCTTTTAACGGTGTAATCTCTGCAAAGTCCATCTCTTTCAACCGCCGCGTTCCTATT 191 |||||||||||||||||||||||||||||||| |||||||| |||||||| || |||||| Sbjct 255 TCCTCTTTTAACGGTGTAATCTCTGCAAAGTCAATCTCTTTTAACCGCCGTGTACCTATT 314 Query 192 ACCCCTGTTTTATCCGCTTCGATTGATAACGGCGGCTCTGATAACAACGGAGGAGGTC-T 250 |||||||||||||||||||| | || |||||||||||||||||||||||||||||||| | Sbjct 315 ACCCCTGTTTTATCCGCTTCAAGTGGTAACGGCGGCTCTGATAACAACGGAGGAGGTCTT 374 Query 251 --TGGTGGTGGTGGCGATGGCGATGGAGGCAAAAATGATGGAGATGGGCACGGTGACGAG 308 |||||||||||| | |||||||||||| || |||||||||||||| |||||||||||| Sbjct 375 AGTGGTGGTGGTGGTGGTGGCGATGGAGGTAAGAATGATGGAGATGGACACGGTGACGAG 434 Query 309 GACAGGGATAGGAACAGGAACGAGGCGATGCTTTTGTTGAAGGAGTCTGGGACTGGATTG 368 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 435 GACAGGGATAGGAACAGGAACGAGGCGATGCTTTTGTTGAAGGAGTCTGGGATTGAATTG 494 Query 369 GAGAGTCTTCCCAAGGATCTAGCGGCTGCTATTGAGTCGGGTCGGATTCCTGGATCGGTT 428 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 495 GAGAGTCTTCCCAAAGATCTAGCGGCTGCTATTGAGGCGGGTCGGATTCCTGGATCGGTT 554 Query 429 ATCACTCGGTTCCTGGAGCTTCAGAAATCGGCTGTGATGCGGTGGCTGATGCAGTTTGGT 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 555 ATCACTCGGTTCCTGGAGCTTCAGAAATCGGCTGTGATGCGGTGGCTGATGCAGTTTGGT 614 Query 489 GGGTTTAGAGAAAGATTGTTGGCTGATGATCTCTTCATGGCTAAACTTGCCATGGAATGT 548 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 615 GGGTTTAGGGAAAGATTGTTGGCTGATGATCTCTTCATGGCTAAACTCGCCATGGAATGT 674 Query 549 GGTGTCGGAATCTTCACCAAGACTGCTGCTGAGTATGAACGGCGTAGAGAAAACTTCTTC 608 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 675 GGTGTTGGAATCTTCACCAAGACTGCTGCTGAGTATGAACGGCGTAGAGAAAACTTCTTC 734 Query 609 AATGAACTTGAAGTCGTCTTTGCCGATGTGGCGATGGCTATTATTGCTGATTTCATGTTA 668 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 735 AATGAACTTGAAGTTGTCTTTGCCGATGTGGCGATGGCTATTATTGCTGATTTCATGTTG 794 Query 669 GTTTATCTTCCTGCTCCTACCGTATCTCTTCGACCACCTCTTGCACTTACTGCTGGAGGT 728 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 795 GTTTATCTTCCTGCTCCTACCGTTTCTCTTCGACCACCTCTCGCACTTACTGCTGGAGGT 854 Query 729 ATATCCAAGTTTTTCCACAACTGCCCAGACAATGCCTTCCAGGTTGCTCTCTCCGGAACC 788 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 855 ATATCCAAGTTTTTCCACAACTGCCCAGACAATGCCTTCCAGGTTGCTCTCTCCGGAACC 914 Query 789 TCATATACTCTCTTGCAAAGGCTAGGTGCTATAACGCGCAATGGAGCTAAGCTGTTTGCC 848 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 915 TCATATACTCTCTTGCAAAGGCTAGGTGCTATAACGCGCAATGGAGCTAAGCTGTTTGCC 974 Query 849 GTTGGCACCACATCATCGCTGGTTGGTACTGCTATTACAAATGCATTCATAAAAGCACGA 908 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 975 GTTGGCACCACATCATCGCTGGTTGGTACTGCTATTACAAATGCATTCATAAAAGCACGA 1034 Query 909 CGAGCTGTAGACCAGACTTCTGAAAGTGAAGTTGAAACTGTTCCGATCGTCTCCACAAGT 968 |||||| ||||||| ||||||| ||||||| |||||||||||||| |||||||||||| Sbjct 1035 AAAGCTGTGGACCAGAATTCTGAAGGTGAAGTCGAAACTGTTCCGATAGTCTCCACAAGT 1094 Query 969 GTTGCATATGGTGTCTATATGGCAGTTTCTAGCAACCTAAGGTACCAAATAGTGGCAGGT 1028 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 1095 GTTGCATATGGTGTCTACATGGCAGTTTCTAGCAACCTAAGGTACCAAATAGTGGCTGGT 1154 Query 1029 GTAATTGAACAACGTCTCCTGGAGCCAATGCTACACCAACACAAACTTGCACTGAGTGCG 1088 || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1155 GTGATTGAACAACGTCTCCTGGAGCCAATGCTACACCAACACAAACTTGCACTCAGTGCG 1214 Query 1089 TTGTG-TTTCGCAGTTAGAACAGGCAACACATTCTTGGGTTCCTTATTATGGGTGGATTA 1147 ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1215 TTGTGCTTT-GCAGTTAGAACAGGCAACACATTCTTGGGTTCCTTATTATGGGTGGATTA 1273 Query 1148 TGCCCGCCTCATCGGTATCCAGAAATCTCATTGAAGAAGC--A----GAACCGGATGTGC 1201 |||||||||||| ||||||||||||||||| ||| ||||| | ||||||||||||| Sbjct 1274 TGCCCGCCTCATTGGTATCCAGAAATCTCACTGATGAAGCGGAATAAGAACCGGATGTGC 1333 Query 1202 CCG 1204 ||| Sbjct 1334 CCG 1336 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59186442555 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5