BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg940930 Length=963 Score E Sequences producing significant alignments: (Bits) Value AT5G14500.1 | Symbols: | aldose 1-epimerase family protein | c... 1535 0.0 > AT5G14500.1 | Symbols: | aldose 1-epimerase family protein | chr5:4674233-4676765 REVERSE LENGTH=1329 Length=1329 Score = 1535 bits (831), Expect = 0.0 Identities = 911/949 (96%), Gaps = 7/949 (1%) Strand=Plus/Plus Query 1 TCGAGGTTAA--A-GCCAAAATCGATGCCTTTGAATGTAGCCAATGATCGTGATGGTTCT 57 |||||||||| | ||| |||||||||||||| ||||||| ||||||||||||||| ||| Sbjct 115 TCGAGGTTAATTAGGCCCAAATCGATGCCTTTAAATGTAGTCAATGATCGTGATGGCTCT 174 Query 58 TCTCGCATTCTTTTGACCGACCCTGCCGGTTCAACTGCTGAGGTGCTTTTGTATGG-GGG 116 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 175 TCTCGCATTCTTTTGACCGACCCTGCCGGATCAACTGCTGAGGTGCTTTTGTATGGAGGG 234 Query 117 ACAAGTGGTTTCTTGGAGAAATGAAAGGAGAGAGCAGTTGCTTTATATGAGCAGCAAGGC 176 |||||||||||||||| ||| |||||||||||| |||||||||||||||||| |||||| Sbjct 235 -CAAGTGGTTTCTTGGAAAAACGAAAGGAGAGAGAAGTTGCTTTATATGAGCACCAAGGC 293 Query 177 GCAATTGAAACCACCCAAGGCCATTAGGGGAGGGTTACCTATCTGCTTTCCACAGTTTGG 236 ||||||||| ||||| ||||| || |||||||||||||||||| |||||||||||||||| Sbjct 294 GCAATTGAAGCCACCAAAGGCGATCAGGGGAGGGTTACCTATCAGCTTTCCACAGTTTGG 353 Query 237 AAATTTTGGTGCACTTGAGCGACATGGATTTGCTCGTAACAGATTCTGGTCATTTGATAA 296 ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| Sbjct 354 AAATTTTGGTGCACTTGAGCGACATGGATTTGCCCGTAACAGATTCTGGTCACTTGATAA 413 Query 297 TGATCCTGCACCTCTGCCGCCGGCTAACCAGCAATCAACTGTTGATTTAGTATTGAAGTC 356 ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 414 TGATCCTTCACCTCTGCCTCCGGCTAACCAGCAATCAACTGTTGATTTAGTATTGAAGTC 473 Query 357 TACTGAAGATGATTTGAAGATATGGCCTCATAGCTTTGAACTTCGTGTTCGCATATCTAT 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 474 TACTGAAGATGATTTGAAGATATGGCCTCATAGCTTTGAACTTCGTGTTCGCATATCTAT 533 Query 417 CAGTCCTGGAAAACTTACTATCATCCCGCGTGTGAGGAACACTGAC-CTAAAGGCATTCT 475 |||||||||||||||||| || |||||||||||||||||||||||| | ||||||||| | Sbjct 534 CAGTCCTGGAAAACTTACAATAATCCCGCGTGTGAGGAACACTGACAC-AAAGGCATTTT 592 Query 476 CCTTTATGTTTTCACTTCGTAACTACTTATATGTATCCGACATAAGTGAAGTTCGGGTTG 535 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 593 CCTTTATGTTTTCACTTCGTAACTACTTATATGTATCCGATATAAGTGAAGTTCGGGTTG 652 Query 536 AGGGTCTGGAGACACTTGATTATCTGGACAACTTGATGCGTAGAGAAAGATTCACAGAGC 595 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 653 AGGGTCTGGAGACGCTTGATTATCTGGACAACTTGATGCGTAGAGAAAGATTCACGGAGC 712 Query 596 AGGCAGATGCAATTACCTTTGACGGCGAGGTTGATAGAGTGTACTTGAACACGCCGACAA 655 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 713 AGGCAGATGCAATTACCTTTGACGGCGAGGTTGATAAAGTGTACTTGAACACGCCGACAA 772 Query 656 AGATTGCCATCATAGATCATGAGAGAAAAAGAACTATCGAGTTGCGAAAGGAAGGCATGC 715 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 773 AGATTGCCATCATAGATCATGAGAGGAAAAGAACTATCGAGTTGCGAAAGGAAGGCATGC 832 Query 716 CAAATGCAGTTGTGTGGAACCCTTGGGATAAGAAGGCCAAGAGTATTGCAGATATGGGAG 775 ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 833 CAAATGCAGCTGTGTGGAACCCTTGGGACAAGAAGGCCAAGAGTATTGCAGATATGGGAG 892 Query 776 ATGAGGATTACACAACAATGCTGTGTGTAGATTCTGGTGCTATAGAAACCCCAATTGTGT 835 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 893 ATGAGGATTACACAACAATGCTGTGTGTAGATTCTGGTGCTATAGAAAGCCCAATTGTGT 952 Query 836 TGAAGCCACATGAAGAGTGGAGAGGGAGACAAGAACTCTCTATCGTCTCCTCAAGCTACT 895 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 953 TGAAGCCACATGAAGAGTGGAAAGGAAGACAAGAACTCTCTATCGTCTCCTCAAGCTACT 1012 Query 896 GCAGCGGTCAGCTCGATCCACGTAAGGTTCTTTATGGGGATTACTGATA 944 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1013 GCAGCGGTCAGCTCGATCCACGTAAGGTTCTTTATGGGGATTACTGATA 1061 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47119629886 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5