BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg941077 Length=2287 Score E Sequences producing significant alignments: (Bits) Value AT5G15870.1 | Symbols: | glycosyl hydrolase family 81 protein ... 3441 0.0 > AT5G15870.1 | Symbols: | glycosyl hydrolase family 81 protein | chr5:5182641-5184878 REVERSE LENGTH=2238 Length=2238 Score = 3441 bits (1863), Expect = 0.0 Identities = 2119/2244 (94%), Gaps = 12/2244 (1%) Strand=Plus/Plus Query 27 ATGTTGAAAAAAGTGAGGCGAAAAGTCAAAGTCTTAATCACCAAACCCTTTAAAAAGCCC 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGTTGAAAAAAGTGAGGCGAAAAGTCAAAGTCTTAATCACCAAACCCTTTAAAAAGCCC 60 Query 87 AAGAACACACCTTCAAGGCCTCCATCACCACCTCTTCCTCTTCCTCCTTCACCATCTCCA 146 ||||||| ||| || | | ||| ||||||||||||||||||||||||||||||||||| Sbjct 61 AAGAACAGACC-TCCA--TCACCACCACCACCTCTTCCTCTTCCTCCTTCACCATCTCCA 117 Query 147 CCACCGCCTCAAGAAATGTCTTCCTCAAGACAAAGAAACACTCCGTTTCTCTTCCCAAGA 206 |||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 118 CCACCGTCTCAACAAATGTCTTCCTCAAGACAAAAAAACACTCCGTTTCTCTTCCCAAGA 177 Query 207 TCCGATTCCTCTGTTTTACCCGACCCGTCTCGTTTCTTCAGCCACGATCTCCTCTCAACT 266 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 178 TCCGATTCCTCTGTTCTACCCGACCCGTCTCGTTTCTTCAGCCACGATCTCCTCTCATCT 237 Query 267 CCTCTCCCCACAAACTCATTCTTCCAAAACTTCACTCTCAAAAATGGCGACCAAGCTGAG 326 |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 238 CCTCTCCCTACAAACTCTTTCTTCCAAAACTTCACTCTCAACAATGGCGACCAAGCTGAG 297 Query 327 TACTTTCACCCTTACATCATCAAACCCTCGACTTCATCTCTCTCCATCTCATACCCATCT 386 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 298 TACTTTCATCCTTACATCATCAAACCCTCGACTTCATCTCTCTCCATCTCCTACCCATCT 357 Query 387 CTCTCCCACAACTCTGCTTTCATCTACGAAGCTTTCAACGCCGACATCATCATAACCGGG 446 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 358 CTCTCCCACAACTCTGCTTTCATCTACGAAGCTTTCAACGCCGACATAACCATAACCGGG 417 Query 447 TCAGATGGACCCGACCCGCATTCTCGAAAAACTCATCTGATCTCTTCCTTCAGCGATCTC 506 |||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| Sbjct 418 TCAGATGGACCCGACCCGCATTCTCGTAAATCTCATCTCATCTCTTCCTTCAGCGATCTC 477 Query 507 GGCGTCACTCTCGATTTCCCTTCCTCTAATCTCAGATTCTTCCTCGTCAGAGGAAGCCCT 566 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 478 GGCGTCACTCTCGATTTCCCCTCCTCTAATCTCAGATTCTTCCTCGTTAGAGGAAGCCCT 537 Query 567 TTCATCACCTTCTCCGTTAACTCCTCCATCACAATCTCAACGATCCACGCCGTTTTATCA 626 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 538 TTCATCACCTTCTCCGTTAACTCCTCCATCACAATCTCAACGATCCACGCTGTTTTATCA 597 Query 627 CTTTCCGGTAACACCTCATCAACAAAGTACACCGCCAAGCTCAACAACAACCAAACATGG 686 ||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| Sbjct 598 CTTTCCGGTAACACCTCTTCAACAAAGTACACCGTCAAACTCAACAACAACCAAACATGG 657 Query 687 CTAATCTACGCCTCTTCTCCGATCAATCTAACCAAAGACGGCGTTTCTTCCATCAATTGC 746 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 658 CTAATCTACGCCTCTTCTCCGATCAATCTAACCAAAGACGGCGTTTCTTCAATCAATTGC 717 Query 747 GGTGCTGGGTTTTCGGGTATTATCCGAATCGTCGCGTTACCAAATCCAGAT---T-TT-- 800 |||| ||||||||||||||||||||| ||||||| ||||||||||||| || | || Sbjct 718 GGTGATGGGTTTTCGGGTATTATCCGGATCGTCGTGTTACCAAATCCAAATCCGTATTTC 777 Query 801 GAATCAGTCCTCGACAGATTCAGTTGCTGTTACCCAGTTTCCGGTGACGCTGATTTCACA 860 ||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct 778 GAAACAATCCTCGACGGATTCAGTTGCTCTTACCCAGTTTCCGGTGACGCTGATTTCACA 837 Query 861 AAGCCCTTTGCTTTAGAGTATAAATGGGACAAACGAGGCTATGGAGATCTTCTAATGCTA 920 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 838 AAGCCGTTTGCTTTAGAGTATAAATGGGAGAAACGAGGCTATGGAGATCTTCTAATGCTA 897 Query 921 GCTCATCCTCTTCATCTCAAGCTTTTATCAAACAACGATTGTTCAATCGCAGTTCTAGAC 980 ||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||| Sbjct 898 GCTCATCCTCTTCATCTCAAGCTTTTATCAACCAACGATTGTTCTATCACAGTTCTAGAC 957 Query 981 AATTTCAGATACAACAGCATCGACGGAGATTTAGTAGGTGTCGTCGGAGATTCATGGGTT 1040 ||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct 958 AATTTCAAATACAACAGCATCGACGGTGATTTAGTAGGTGTCATCGGAGATTCATGGGTT 1017 Query 1041 TTGAAACCAGACCCTGTTTCGGTAACGTGGCACTCTATCAAAGGAGTTCAAGAAGATTCT 1100 || ||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 1018 TTAAAACCAGACCCTGTTTCTGTTACGTGGCACTCTATCAAAGGAGTTCAAGAAGATTCT 1077 Query 1101 CACCAAGAGATTATCTCAGCTCTAATCAAAGACGTAAACGCTTTAGATTCATCAGCTCCG 1160 ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| | Sbjct 1078 CACCAAGAGATCATCTCTGCTCTAATCAAAGACGTTAACGCTTTAGATTCATCAGCTGAG 1137 Query 1161 GTCACGGACTCTTCGTATTTTTACGCGAAATTGATCGCTAGAGCTGCGAGGTTAGCTTTA 1220 ||||| ||||||||||||| ||||||||||||||||| || || ||||||||||||||| Sbjct 1138 GTCACCAACTCTTCGTATTTCTACGCGAAATTGATCGCGAGGGCGGCGAGGTTAGCTTTA 1197 Query 1221 ATCGCTGAAGAAGTTTGTTATCTCGATGTGATTCCAGCGATTAGAACTTACTTGAAGAAC 1280 || |||||||||||||||||||| ||||| |||||| |||||||||||||||||||||| Sbjct 1198 ATAGCTGAAGAAGTTTGTTATCTGGATGTTATTCCAAAGATTAGAACTTACTTGAAGAAC 1257 Query 1281 ATGATCGAGCCGTGGCTTAATGGAAGTTTCGGACCAAATGGGTTCTTATATGATCCTAAA 1340 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| Sbjct 1258 ATGATCGAGCCGTGGCTTAATGGAAGTTTCGGACCAAATGGTTTCTTGTATGATCCAAAA 1317 Query 1341 TGGGGAGGTGTGATCACCAAGCTAGGATCGAGAGATTCAGGAGCAGATTTTGGGTTTGGG 1400 |||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| Sbjct 1318 TGGGGAGGTGTGATTACTAAGCTAGGATCTAGAGATTCAGGAGCAGATTTTGGGTTTGGG 1377 Query 1401 ATTTATAATGATCATCATTATCATTTAGGCTACTTTGTTTATGCGATTGCTGTGCTTGCA 1460 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1378 ATTTACAATGATCATCATTATCATTTAGGTTACTTTGTTTATGCGATTGCTGTGCTTGCA 1437 Query 1461 AAGATTGATCCTTTATGGGGAAAGAGATACAAACCTCAAGCGTATACTTTAATGGCGGAT 1520 |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct 1438 AAGATTGATCCTTTATGGGGGAAGAGATACAGACCTCAAGCGTATACTTTAATGGCGGAT 1497 Query 1521 TACATGACGTTGGGGAAGAAAGGAGCTAAGTCGAATTCGAATTACCCGCGTTTGAGATGT 1580 ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1498 TACTTGACGTTGGGGAAGAAAGGAGCCAAGTCGAATTCGAATTACCCGCGTTTGAGATGC 1557 Query 1581 TTTGATCTTTTCAAGCTTCATTCTTGGGCTGGAGGGTTAACGGAGTTCGCCGACGGGAGG 1640 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1558 TTTGATCTTTTCAAGCTTCATTCTTGGGCTGGAGGGTTAACGGAGTTCGCTGACGGGAGG 1617 Query 1641 AATCAGGAGAGTACGAGTGAGGCTGTGAATGCGTATTACTCCGCCGCGTTGTTAGGGTTA 1700 ||||| |||||||| || |||||||| ||||||||||||||||| || ||||| ||| || Sbjct 1618 AATCAAGAGAGTACAAGCGAGGCTGTCAATGCGTATTACTCCGCTGCTTTGTTGGGGCTA 1677 Query 1701 GCTTACGGTGATACACATCTGGTGGCGGCGGCTTCGACGGTTCTGACTCTGGAGATTCAC 1760 ||||| || ||||||||| |||||||||| ||||||| ||||||||| |||||||||||| Sbjct 1678 GCTTATGGGGATACACATTTGGTGGCGGCTGCTTCGATGGTTCTGACGCTGGAGATTCAC 1737 Query 1761 GCCGCGAAAATGTGGTGGCAGGTGAAAGAAGACGACGCTATATACCCGCAAGACTTCACA 1820 || |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 1738 GCGGCGAAAATGTGGTGGCAGGTGAAAGAAGACGACGCTATTTACCCGCAAGATTTCACA 1797 Query 1821 TCGGAGAATCGTGTGGTTGGAGTTTTATGGTCAACAAAGAGAGACAGTGGCTTATGGTTT 1880 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1798 TCGGAGAATCGTGTGGTTGGAGTGTTATGGTCAACAAAGAGAGACAGTGGCTTATGGTTC 1857 Query 1881 GCGCCTAAAGAGTGGAAAGAATGTCGCCTTGGGATACAGTTATTACCGTTACTTCCGGTA 1940 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1858 GCGCCTAAAGAGTGGAAAGAATGTCGCCTTGGGATACAGTTATTACCGTTACTTCCGGTA 1917 Query 1941 TCAGAAGTTCTATTTTCCGATGTAACATTCGTGAAGCAGCTCGTGAATTGGACAATGCCG 2000 ||||||||||| || || || || ||||||||||| ||||||||||||||||||||||| Sbjct 1918 TCAGAAGTTCTGTTCTCGGACGTGACATTCGTGAAACAGCTCGTGAATTGGACAATGCCT 1977 Query 2001 GCGTTGGCGAGAGACAGCGTCGGAGAAGGGTGGAAAGGATTTGTGTATGCTTTGGAAAGT 2060 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1978 GCTTTGGCTAGAGACAGCGTCGGAGAAGGGTGGAAAGGATTTGTGTATGCTTTGGAAAGT 2037 Query 2061 ATTTACGACAAAGATGGAGCAATGGAGAAGATTAAAGGATTAAATGGGTTTGATGATGGG 2120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2038 ATGTACGACAAAGATGGAGCAATGGAGAAGATTAAAGGATTAAATGGGTTTGATGATGGG 2097 Query 2121 AACTCTCTGAGTAATCTTTTGTGGTGGATTCACAGTAGAAACAatgatgatgatgatgat 2180 |||||| | |||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct 2098 AACTCTTTAAGTAATCTGTTGTGGTGGGTTCATAGTAGAAACAATGATGATGATGATGAT 2157 Query 2181 gatTATGAAGAAGACGATGAAGGTGGTTATGGTGGTCATGGCGGTGGCGGGAAGTATTGC 2240 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2158 --T-ATGAAGAAGACGATGAAGGTGGTTATGGTGGTCATGGCGGTGGCGGGAAGTATTGT 2214 Query 2241 TCGTTTGGTCATTATTGTAATTAA 2264 || ||||||||||||||| ||||| Sbjct 2215 TCCTTTGGTCATTATTGTCATTAA 2238 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 113503432245 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5