BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg941263 Length=1786 Score E Sequences producing significant alignments: (Bits) Value AT5G17530.3 | Symbols: | phosphoglucosamine mutase family prot... 2933 0.0 > AT5G17530.3 | Symbols: | phosphoglucosamine mutase family protein | chr5:5777595-5782014 FORWARD LENGTH=2019 Length=2019 Score = 2933 bits (1588), Expect = 0.0 Identities = 1721/1787 (96%), Gaps = 2/1787 (0%) Strand=Plus/Plus Query 1 AAAGAGAACCTGACCCATTCATGTCTGCTTTACTTCCCTGTTCAAGCGGGAAGCTGACAT 60 ||||||||||||||| ||||||||| |||||||||||||| |||| | |||| || ||| Sbjct 201 AAAGAGAACCTGACCTGTTCATGTCTACTTTACTTCCCTGTCCAAGAGAGAAGATGGCAT 260 Query 61 TGAACCTCAACTCTTCCATGCGTGCCCACTCTTTGTCTAAATACCAGACTGTTCTTTCAA 120 | ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 261 TTAACCTCAACTCTTCCATGCGTGCCCACACTTTGTCTAAATACCAGTTTGTTCTTTCAA 320 Query 121 AGCAAAGAACTTTTTACTGCAATGCTGCTTCGTCAAGTGTTACTGTGCCATCTCTTGACA 180 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 321 AGCAAAGAACTTTTTACTGCAATGCTACTTCGTCAAGTGCTACTGTGCCATCTCTTGACA 380 Query 181 AAACTGATTTTCTAAAGCTCCAAAACGGCAGCGATATTCGGGGTGTAGCGGTCCCTGGGG 240 ||| ||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||| Sbjct 381 AAAATGATTTTCTGAAGCTCCAAAACGGCAGTGATATTCGGGGTGTAGCGGTCACTGGGG 440 Query 241 TTGAGGGGGAACCTGTAAGCCTTCCTGAACCAGTGACTGAAGCCATAGCTGCTGCTTTTG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 441 TTGAGGGGGAACCTGTAAGCCTTCCTGAACCAGTGACTGAAGCCATAGCTGCTGCTTTTG 500 Query 301 GGCAATGGCTGTTACACAAGAAGAAGGCTGAATCCCGGCGTTTGAGAGTATCGGTTGGCC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 501 GGCAATGGCTGTTACACAAGAAGAAGGCTGAATCCCGGCGTTTGAGAGTATCTGTTGGCC 560 Query 361 ATGACTCTCGCATATCTGCACAAACCTTGCTGGAGGCGGTTTCTCGAGGTCTTGGTGTTT 420 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 561 ATGACTCTCGCATCTCTGCACAAACTTTGCTGGAGGCGGTTTCTCGAGGTCTTGGTGTTT 620 Query 421 CTGGATTAGATGTTGTTCAGTTCGGGTTAGCATCAACACCAGCAATGTTTAATAGCACAT 480 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct 621 CTGGATTAGATGTTGTTCAGTTTGGATTAGCATCAACACCAGCAATGTTTAATAGCACAT 680 Query 481 TGACTGATGATGAGTCATTCTTGTGCCCAGCTGATGGGGCTATCATGATAACAGCAAGCC 540 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 681 TGACTGAAGATGAGTCATTCTTGTGCCCAGCTGATGGGGCTATTATGATAACAGCAAGCC 740 Query 541 ATCTTCCTTACAACAGGAACGGTTTCAAGTTCTTTACCAGTGATGGAGGGCTTGGGAAGG 600 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 741 ATCTTCCTTACAACAGGAACGGTTTCAAGTTCTTTACCAGTGATGGAGGACTTGGGAAGG 800 Query 601 TTGATATCAAAAACATTTTGGAACGAGCTGCAGATATTTACAAGAACCTTTCTGATGAAA 660 |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 801 TTGATATCAAGAACATTTTGGAGCGAGCTGCAGATATTTACAAGAAGCTTTCTGATGAAA 860 Query 661 ATTTGAGGAAATCACAAAGAGAAAGTTCTTCTATTACAAAGGTTGACTACATGTCAGTAT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 861 ATTTGAGGAAATCACAAAGAGAAAGTTCTTCTATTACAAAGGTTGACTACATGTCAGTAT 920 Query 721 ACACCTCTGGTCTTGTAAAGGCAGTTCGGAAAGCAGCAGGAGATTTAGAGAAGCCTCTAG 780 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 921 ACACCTCTGGTCTTGTAAAGGCAGTCCGGAAAGCAGCAGGAGATTTGGAGAAGCCTCTAG 980 Query 781 AGGGATTTCATATAGTTGTTGATGCTGGAAATGGAGCTGGAGGATTTTTTGCTGCCAAGG 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 981 AGGGATTTCATATAGTTGTTGATGCTGGAAATGGAGCTGGAGGATTTTTTGCTGCCAAGG 1040 Query 841 TGCTTGAGCCTTTAGGAGCAATTACTTCTGGCAGTCAATTTCTGGAACCAGATGGTATGT 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1041 TGCTTGAGCCTTTAGGAGCAATTACTTCTGGCAGTCAATTTCTGGAACCAGATGGTATGT 1100 Query 901 TTCCAAATCACATCCCTAATCCGGAAGATAAGTCGGCAATGGAAGCTATAACCAAGGCTG 960 | |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1101 TCCCAAATCATATCCCTAATCCGGAAGATAAGGCGGCAATGGAAGCTATAACCAAGGCTG 1160 Query 961 TTCTTGATAATAAGGCTGATTTGGGTATCATCTTTGATACTGATGTTGATAGGTCTGCTG 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1161 TTCTTGATAATAAGGCTGATTTGGGTATCATCTTTGATACTGATGTTGATAGGTCTGCTG 1220 Query 1021 CTGTGGATTCAACTGGCCGTGAGTTCAACCGTAATCGTCTTATTGCCTTGCTTTCAGCCA 1080 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 1221 CTGTGGATTCATCTGGCCGTGAATTCAACCGTAATCGTCTTATTGCCTTGCTATCAGCCA 1280 Query 1081 TTGTTCTAGAGGAACACCCTGGCACAACTATTGTTACAGACAGCGTCACTTCGGACGGCC 1140 ||||||||||||||||||||||||||||||| ||||| || || |||||||||||||| | Sbjct 1281 TTGTTCTAGAGGAACACCCTGGCACAACTATAGTTACGGATAGTGTCACTTCGGACGGTC 1340 Query 1141 TGACCTCATTTATTGAAAAGAAGCTTGGCGGAAAGCATCACAGGTTCAAAAGAGGTTACA 1200 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1341 TGACCTCATTTATTGAGAAGAAGCTTGGCGGAAAGCATCACAGGTTCAAAAGAGGTTACA 1400 Query 1201 AGAATGTCATTGATGAAGCTATTCGCTTGAACTCGGTTGGAGAAGAATCACATCTGGCTA 1260 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1401 AGAATGTCATTGACGAAGCTATTCGCTTGAACTCGGTTGGGGAAGAATCACATCTGGCTA 1460 Query 1261 TAGAAACCAGTGGTCATGGAGCTCTAAAAGAAAACCATTGGCTTGACGATGGGGCGTATC 1320 |||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||| Sbjct 1461 TAGAAACCAGTGGTCATGGAGCTCTAAAGGAAAACCATTGGCTCGACGATGGGGCCTATC 1520 Query 1321 TCATGGTAAAAATCTTGAATAAACTGGCTGCGGCCCGAGCTGCTGGTCAAGGGAGTGGCA 1380 |||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 1521 TCATGGTAAAAATCCTGAACAAACTAGCTGCGGCCCGAGCTGCTGGTCAAGGGAGTGGCA 1580 Query 1381 GCAAAGTTTTAACAGATCTTGTTGAAGGTCTGGAGGAGCCCAAAGTGGCTTTAGAACTGA 1440 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1581 GCAAAGTTTTAACAGATCTTGTTGAAGGTCTGGAAGAGCCCAAAGTGGCTTTAGAACTGA 1640 Query 1441 GGCTTAAAATCGACAAGAATCACTCC-GACCTTGAAGGAAGTGATTTCCGGGAGTATGGA 1499 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 1641 GGCTTAAAATCGACAAGAATCAC-CCTGACCTTGAAGGAAGTGATTTCCGGGAGTATGGA 1699 Query 1500 GAGAAGGTCCTGCAACACGTTTCAAACTCAATAGAAACAAATCCAAATCTTAAAAGAGCT 1559 |||||||||||||||||||| || |||||||||||||||||||||||||||| || |||| Sbjct 1700 GAGAAGGTCCTGCAACACGTGTCGAACTCAATAGAAACAAATCCAAATCTTATAATAGCT 1759 Query 1560 CCAGTTAACTATGAAGGGATCCGCGTTTCGGGCTTTGGTGGATGGTTTCTTCTTAGACTT 1619 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1760 CCAGTTAACTACGAAGGGATCCGCGTTTCGGGCTTTGGTGGATGGTTTCTTCTCAGACTT 1819 Query 1620 TCTCTCCACGATCCTGTTCTTCCCCTTAACATCGAGGCGCAGAGTGAGGATGATGCTGTG 1679 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1820 TCTCTCCATGATCCTGTTCTTCCCCTTAACATCGAGGCACAGAGTGAGGATGATGCTGTG 1879 Query 1680 AAGTTAGGCCTTGTGGTTGCTACGGCAGTGAAGGAATTCAATGCTTTGGACACCTCTGCC 1739 || ||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| Sbjct 1880 AAATTAGGCCTTGTGGTTGCTACGACAGTGAAGGAGTTCAATGCTTTGGACACCTGTGCC 1939 Query 1740 TTGTCCAACCTCACTCACTCCTCCTAAGATTGGCATGGAACAATGTA 1786 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1940 TTGTCCAACCTCACTCACTCCTCCTAAGATTGGCATGGAACAATGTA 1986 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 88352959200 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5