BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg941495
Length=1139
Score E
Sequences producing significant alignments: (Bits) Value
AT5G19470.1 | Symbols: atnudt24, NUDT24 | nudix hydrolase homol... 1672 0.0
AT5G19460.1 | Symbols: atnudt20, NUDT20 | nudix hydrolase homol... 1099 0.0
> AT5G19470.1 | Symbols: atnudt24, NUDT24 | nudix hydrolase homolog
24 | chr5:6566357-6568805 FORWARD LENGTH=1271
Length=1271
Score = 1672 bits (905), Expect = 0.0
Identities = 1043/1112 (94%), Gaps = 0/1112 (0%)
Strand=Plus/Plus
Query 22 ATGGCATCTGGATTTTGTTCTCTTTGTCCCACTGTCACTTCCTTATTCTCGTCCCAAGCG 81
|||||||||| |||||| || |||||||||||| ||| ||||||||||| ||||| |||
Sbjct 1 ATGGCATCTGCATTTTGCTCACTTTGTCCCACTCCCACCTCCTTATTCTCTTCCCACGCG 60
Query 82 CTTATACCCACTCTACAGTGGCGTTCTAGTTCGAGTTCTAGGTCTCCTCCGGTACATATT 141
|||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||
Sbjct 61 CTTATACCCACTCTACAGTGGCGTTCGAGTTCGAGTTCGAGGTCTCCTCCGCTACATATT 120
Query 142 TCCCGCGTTTTATCAGTTGAAACTGTTCCTATAAGCCCATCCTTCACCTGGAACGATGTT 201
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 121 TCCCGCGTTTTATCAGTTGAAACTGTTCCTTTAAGCCCATCATTCACCTGGAACGATGTT 180
Query 202 TTCGAGAATTGTCGAGCCGAGTATGTGCCTCAAAACTCGTCCGATCTCACCGGATTTCTT 261
|| ||||| ||||| || || |||||||| ||||| ||||||||||||||||||||
Sbjct 181 TTTGAGAACAGTCGAAAAGAATACGTGCCTCAGAACTCCTCCGATCTCACCGGATTTCTC 240
Query 262 GAGAAAGTTGACCGCTGCAATCGTGGATTAGAAAAGTTAGCTGAGTTCATTCCATTTGTT 321
|||||||| |||||||| |||||||||||||| ||||||| |||||||||||||||||||
Sbjct 241 GAGAAAGTCGACCGCTGTAATCGTGGATTAGAGAAGTTAGGTGAGTTCATTCCATTTGTT 300
Query 322 ATAGAGGAACAAATCGTTGGTTATATTCACAAGGGATTTACAAAGTACTTGAGGGACTTT 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 ATAGAGGAACAAATCGTTGGTTATATTCACAAGGGATTTACAAAGTACTTGAGGGACTTT 360
Query 382 CATGATATCTTTACATTTTCACAATATGGTGGCCATGTAACACTTAACATGATGCTTAAA 441
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 361 AATGATATCTTTACATTTTCACAATATGGTGGCCATGTAACGCTTAACATGATGCTTGAC 420
Query 442 AAGCCTGAAGAAAGAACCAGAGCAGTTGCAAATGTGATCAAAATCTTGGGTAACAGAGGA 501
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||
Sbjct 421 AAGCCTGAAGAAAGAACCAGAGCAGTTGCACATGTGATCAAAATATTGGGTAACAAAGGA 480
Query 502 ATCATCCCTGGAATACGAAATGAGCTGTATCCTGTGAAGCCATCGTTTAATGCTTCGGCC 561
||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||
Sbjct 481 ATCATCCCTGGGATACGAAATGAGCTATATCCTGTGAAGCCATCGTTTAATGCTCCTGCC 540
Query 562 tttttttCTCTAGAGCGTGCTGCTGCTCCTTATTTCGGATTGAAGGGTTACGCAATTCAT 621
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 541 TTTTTTTCTATAGAGCGTGCTGCTGCTCCTTATTTTGGATTGAAGGGTTACGCAATTCAT 600
Query 622 GTGAATGGGTATGTAGAAAGAGATGGACAAAAATTTCTATGGATAGGTAAGAGAAGTCTA 681
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 601 GTGAATGGGTATGTAGAAAGAGATGGACAAAAATTTCTATGGATAGGTAAAAGAAGTCTA 660
Query 682 GCGAAATCCACTTATCCTGGATTGCTTGATCATCTGGTTGCTGGAGGATTGCCTCATGGG 741
|| |||||||||||||| ||| |||||||||||||||||||||||||||||||| |||
Sbjct 661 GCAAAATCCACTTATCCAGGAAAACTTGATCATCTGGTTGCTGGAGGATTGCCTCACGGG 720
Query 742 ATTAGTGTTTGTGAGAATCTGGTAAAGGAATGCAAAGAGGAAGCTGGGATTTCCAAAGTC 801
||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 721 ATTAGCGTTTGTGAGAATCTAGTAAAGGAATGCGAAGAGGAAGCTGGGATTTCCAAAGTC 780
Query 802 TTGGCTGATAGGGCGATAGCGGTTGGTGCTGTTTCATACATGGATATCGATCGGTACTGT 861
||||||||||||||||| ||||| |||| |||||| ||||||||||||||||||||||||
Sbjct 781 TTGGCTGATAGGGCGATTGCGGTCGGTGTTGTTTCCTACATGGATATCGATCGGTACTGT 840
Query 862 TTCACACGTGATGTGCTGTTTTGTTATGATTTGGAGCTCCCTCAAGATTTTGTTCCCAAA 921
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 841 TTCACACGTGATGTGCTGTTTTGTTATGATTTGGAACTCCCTCAAGATTTTGTTCCCACA 900
Query 922 AATCAAGATGGAGAAGTTGACAGCTTCAAGTTGATTCCAGTAGCCCAAGTTGCTAATGTG 981
|||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||
Sbjct 901 AATCAAGATGGAGAAGTTGACAGCTTCAGGTTGATTCCAGTCGCTCAAGTTGCTAATGTG 960
Query 982 GTTCGGAAGACTAGTTTTTTCAAGGATAGTTGTTCCCTTGTCATTATTGACTTCTTGTTT 1041
|||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct 961 GTTCGGAAGACTAGTTTTTTTAAGGACAGTTGTTCCCTGGTCATTATTGACTTCTTGTTT 1020
Query 1042 CGGCACGGGTTCATCCGACCAGAGTCACCGGGTTACTTGGATCTATACCGTCGCCTGAGG 1101
||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1021 CGGCACGGGTTAATCAGACCAGAGTCACCGGGTTACTTGGATCTATACCGACGCCTGAGG 1080
Query 1102 AATGGAGATTGCTCTTAAGGATGTTACTATCT 1133
|||||||||||||| |||||| |||||| |||
Sbjct 1081 AATGGAGATTGCTCATAAGGACGTTACTTTCT 1112
> AT5G19460.1 | Symbols: atnudt20, NUDT20 | nudix hydrolase homolog
20 | chr5:6562971-6565632 FORWARD LENGTH=1628
Length=1628
Score = 1099 bits (595), Expect = 0.0
Identities = 988/1169 (85%), Gaps = 62/1169 (5%)
Strand=Plus/Plus
Query 14 CCATAG-AAATGGCATCTGGATTTTGTTCTCTTTG-TCCCACTGT---CACTTCCTTATT 68
|||| | ||||||||||||| ||||| || | | | || ||||| ||| ||||||||
Sbjct 133 CCATCGAAAATGGCATCTGGGTTTTGCTCAC-TGGCTCTAACTGTCACCACCTCCTTATT 191
Query 69 CTCGTCCCAAGCGCTTATAC--C-CACTCTA--CAGT-GGCGTTCTAGTTCGAGTTCTAG 122
||||||||| ||| ||| || | | |||| || | || | |||| |||||||
Sbjct 192 CTCGTCCCACGCGATTACACGGCGCGTTCTACCCATTCTACGGTGGCGTTCCAGTTCTAT 251
Query 123 GT--C-TCCTCCGGTACAT-ATTTCCCGCGTTTTATCAGTTG--A-AACTGTTCCTATAA 175
|| | | ||||| | | | | |||||||| |||||||| || | ||||||||| ||||
Sbjct 252 GTCCCTTTCTCCGCTGCGTCA-TTCCCGCGCTTTATCAGCTGCAACAACTGTTCCGATAA 310
Query 176 GCCCATCCTTCACCTGGAACGATGTTTTCGAGAATTGTCGAGCCGAGTATGTGCCTCAAA 235
|| |||||||||| ||| |||| || |||||| |||| | | || | | | | |
Sbjct 311 GCTCATCCTTCACGTGGGACGACGTAATCGAGACCGGTCG-GGC-AG-A---G--T-ACA 361
Query 236 ACTCGTCCGATCTCACCGGATTTCTT-GAGAAAGTTGACCGCTGCAATCGTGGATTAGAA 294
|||| |||||||||||||||||| || |||||| | ||||||||||||| |||| |||
Sbjct 362 ACTCTTCCGATCTCACCGGATTT-TTCGAGAAAATCAACCGCTGCAATCGCGGATCCGAA 420
Query 295 AAGTTAGCTGAGTTCATTCCATTTGTTATAGAGGAACAAATCGTTGGTTATATTCACAAG 354
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 421 AAGTTAGGTGAGTTCATTCCATTTGTTATAGAGGAACAAATCGTTGGTTATATTCATAAA 480
Query 355 GGATTTACAAAGTACTTGAGGGACTTTCATGATATCTTTACATTTTCAC--AA------- 405
||||||| ||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 481 AGATTTACGGAGTACTTGAGGGAGTTTCATGATATCTTTACATTTTCACAAAATGGTTCT 540
Query 406 -----T-A---TG--G-TGGCCATGTAACACTTAA-CATGATGCTTAAAAAGCCTGAAGA 452
| | || | |||| ||||||| ||||| | |||||||| |||||||||||||
Sbjct 541 TGTCCTGACCGTGTTGATGGCTATGTAACGCTTAATC-TGATGCTTCAAAAGCCTGAAGA 599
Query 453 AAGAACCAGAGCAGTTGCAAATGTGATCAAAATCTTGGGTAACAGAGGAATCATCCCTGG 512
|||||||||||||||||| ||||||||||||| |||||| ||| ||||||||| || ||
Sbjct 600 TAGAACCAGAGCAGTTGCAGATGTGATCAAAATATTGGGTGACAAAGGAATCATTCCAGG 659
Query 513 AATACGAAATGAGCTGTATCCTGTGAAGCCATCGTTTAATGCTTCGGCCtttttttCTCT 572
|||||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||
Sbjct 660 AATACGTAATGAGCTGTATCCTGTGAAACCATCGTTTAATGCCCCGGTCTTTTTTTCTCT 719
Query 573 AGAGCGTGCTGCTGCTCCTTATTTCGG-ATTGAAGGGTTACGCAATTCATGTGAATGGGT 631
||||||||||||||||||||||||||| ||| |||||||||| | |||| |||||||||
Sbjct 720 AGAGCGTGCTGCTGCTCCTTATTTCGGAATT-AAGGGTTACGGAGTTCACATGAATGGGT 778
Query 632 ATGTAGAAAGAGATGGACAAAAATTTCTATGGATAGGTAAGAGAAGTCTAGCGAAATCCA 691
||||||||||||||||||| ||||| || |||||||||||||||||||| | |||||||
Sbjct 779 ATGTAGAAAGAGATGGACAGAAATTACTGTGGATAGGTAAGAGAAGTCTCTCAAAATCCA 838
Query 692 CTTATCCTGGATTGCTTGATCATCTGGTTGCTGGAGGATTGCCTCATGGGATTAG-TGTT 750
| ||||| ||| |||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 839 CGTATCCAGGAATGCTTGATCATCTGGTTGCTGGAGGATTGCCTCACGGGATTAGCTG-C 897
Query 751 TGT-GAGAATCTGGTAAAGGAATGCAAAGAGGAAGCTGGGATTTCCAAAGTC-TTGGCTG 808
|| || ||||| ||||||||||| ||||||||||||||||||||| || | || ||||
Sbjct 898 GGTGGA-AATCTAGTAAAGGAATGTGAAGAGGAAGCTGGGATTTCCAGAGCCATT-GCTG 955
Query 809 ATAGGGCGATAGCGGTTGGTGCTGTTTCATACATGGATATCGATCGGTACTGTTTCACAC 868
||||||| ||||||||||||||||| ||||| |||| ||||||| ||||||||||| ||
Sbjct 956 ATAGGGCAATAGCGGTTGGTGCTGTCTCATATTTGGACATCGATCAGTACTGTTTCAAAC 1015
Query 869 GTGATGTGCTGTTTTGTTATGATTTGGAGCTCCCTCAAGATTTTGTTCCCAAAAATCAAG 928
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct 1016 GTGATGTGCTGTTTTGTTATGATTTGGAACTCCCTGAAGATTTTGTTCCCAAAAATCAAG 1075
Query 929 ATGGAGAAGTTGACAGCTTCAAGTTGATTCCAGTAGCCCAAGTTGCTAATGTGGTTCGGA 988
||||||||||||| |||||||||||||||||||||||||||||||||| |||| || ||
Sbjct 1076 ATGGAGAAGTTGAGAGCTTCAAGTTGATTCCAGTAGCCCAAGTTGCTAGTGTGATTAAGA 1135
Query 989 AGACTAGTTTTTTCAAGGATAGTTGTTCCCTTGTCATTATTGACTTCTTGTTTCGGCACG 1048
| |||||||| ||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 1136 AAACTAGTTTCTTCAAGGCGAACTGTTCCCTTGTCATTATTGACTTCTTGTTTCGGCACG 1195
Query 1049 GGTTCATCCGACCAGAGTCACCGGGTTACTTGGATCTATACCGTCGCCTGAGGAATGGAG 1108
|||| ||| ||||||| ||| ||||||||||||||||||||| |||||||||||| |||
Sbjct 1196 GGTTTATCAGACCAGAATCATCGGGTTACTTGGATCTATACCAACGCCTGAGGAATAGAG 1255
Query 1109 ATTGCTCTTAAGGATGTTACTATCTGATG 1137
||||||| || ||||||||||||||||||
Sbjct 1256 ATTGCTCATAGGGATGTTACTATCTGATG 1284
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55873206585
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5