BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg941617 Length=676 Score E Sequences producing significant alignments: (Bits) Value AT5G20630.1 | Symbols: GLP3, GLP3A, GLP3B, ATGER3, GER3 | germi... 1029 0.0 > AT5G20630.1 | Symbols: GLP3, GLP3A, GLP3B, ATGER3, GER3 | germin 3 | chr5:6975104-6975993 REVERSE LENGTH=890 Length=890 Score = 1029 bits (557), Expect = 0.0 Identities = 635/674 (94%), Gaps = 0/674 (0%) Strand=Plus/Plus Query 1 ATAAAACATTTTAAAGAAAAATGAAGATGATAATCCATATTTTCTTCATCATCTCCCTCG 60 |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 24 ATAAAACATTCTAAAGAAAAATGAAGATGATAATCCAAATTTTCTTCATCATCTCCCTCA 83 Query 61 TTTCATCCATCTCTTTTGCCTCTGTTCAAGACTTTTGTGTAGCTGATCCAAATGGTCCTC 120 ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 84 TTTCAACCATCTCTTTTGCCTCTGTTCAAGACTTTTGTGTAGCTGACCCAAAGGGTCCTC 143 Query 121 AAAGTCCATCAGGGTACTCTTGCAAGAACCCTGACCAGGTCACCGAAAATGACTTTGCAT 180 |||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 144 AAAGCCCATCAGGTTACTCTTGCAAGAACCCTGACCAAGTCACCGAAAATGACTTTGCAT 203 Query 181 TTTCCGGACTCGGCAAAGCTGGAAACACTTCGAACATCATTAAAGCCGCAGTGACTCCAG 240 || |||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 204 TTACCGGCCTCGGCACAGCTGGAAACACTTCCAACATCATTAAAGCCGCAGTGACTCCAG 263 Query 241 CCTTTGCGCCTGCTTTTGCGGGCACCAATGGCCTTGGCGTCTCTCTGGCTCGTCTTGACT 300 ||||||| ||||||| || |||| ||||||||||||||| ||||||||||||||||||| Sbjct 264 CCTTTGCTCCTGCTTACGCAGGCATCAATGGCCTTGGCGTATCTCTGGCTCGTCTTGACT 323 Query 301 TAGCCGGTGGTGGTGTCATCCCTCTTCACACTCATCCTGGTGCTTCTGAGGCCCTTGTAG 360 ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct 324 TAGCCGGTGGTGGTGTCATCCCTCTCCACACTCATCCTGGTGCTTCTGAGGTCCTTGTAG 383 Query 361 TCATACAAGGCACCATTTGCGCCGGATTCATCTCCTCTGCTAACAAAGTCTACTTGAAGA 420 |||| ||||||||||||||||||||||| |||||||| || |||||||| |||||||||| Sbjct 384 TCATTCAAGGCACCATTTGCGCCGGATTTATCTCCTCCGCCAACAAAGTTTACTTGAAGA 443 Query 421 CTCTCAACAGAGGCGATTCTATGGTGTTTCCTCAAGGGCTTCTTCATTTTCAGCTTAACT 480 ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 444 CTCTCAACAGAGGAGATTCTATGGTGTTTCCTCAAGGACTTCTTCATTTTCAGCTAAACT 503 Query 481 CTGGGAAAGGCCCTGCCTTAGCCTTCGTCGCCTTCGGAAGCTCCTCCCCGGGGCTCCAGA 540 ||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||| | Sbjct 504 CTGGGAAAGGCCCTGCCTTGGCCTTTGTCGCATTCGGAAGCTCCTCCCCAGGGCTCCAAA 563 Query 541 TTCTACCATTTGCTCTGTTTGCAAACGATTTGCCTTCAGAACTCGTTGAAGCCACGACGT 600 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct 564 TTCTACCATTTGCTCTGTTTGCAAACGATTTGCCTTCAGAACTTGTTGAAGCCACAACGT 623 Query 601 TCCTTAGCGATGCAGAAGTTAAGAAGCTTAAGGGTGTGCTTGGAGGAACTAATTAAGCGT 660 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 624 TCCTTAGCGATGCAGAAGTTAAGAAGCTTAAGGGTGTGCTTGGGGGAACTAATTAAGCTT 683 Query 661 CTCTTAATTTCATT 674 |||||| ||||||| Sbjct 684 CTCTTAGTTTCATT 697 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 32702429697 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5