BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg941626 Length=926 Score E Sequences producing significant alignments: (Bits) Value AT5G20700.1 | Symbols: | Protein of unknown function (DUF581) ... 1463 0.0 > AT5G20700.1 | Symbols: | Protein of unknown function (DUF581) | chr5:7005844-7007117 REVERSE LENGTH=1195 Length=1195 Score = 1463 bits (792), Expect = 0.0 Identities = 883/926 (95%), Gaps = 10/926 (1%) Strand=Plus/Plus Query 9 TCTCTCAAGATCATGCTTACCAAAAGAACCCATCCCATGATCGGAAAGATATCGGAGCTC 68 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 103 TCTCTCAAGATCATGCTTACTAAAAGAACCCATCCCATGATCGGAAAGATATCGGAGCTC 162 Query 69 CTCGTCGGTGTCAACCGATCCACGGCTGCTCCTTTCTTCGATGTCTTGATGACGAGCCCT 128 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 163 CTCGTCGGTGTCAACCGATCCACGGCGGCTCCTTTCTTCGACGTCTTGATGACGAGCCCT 222 Query 129 AAAAGCCCACTTGATTTCAAGATTCTCCCTCAGATATCTCAAAGAAACAGCTCAAAGAGA 188 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 223 AAAAGCCCACTGGATTTCAAGATTCTCCCTCAGATATCTCAAAGAAACAGCTCAAAGAGA 282 Query 189 TTCTACGATGACAATCTTGGTGGCTCTGTTGGTCTAGGGATTGTAGCTGCACTCGAGAAC 248 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 283 TTCTACGATGACAATCTTGGTGGCTCTGTTGGTCTAGGGATTGTAGCCGCGCTCGAGAAC 342 Query 249 TCAAACACTCGTCGAATCACGAGCGTTTGTAGATCGGAACCGACCCAACCCGGCGGGTCT 308 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 343 TCAAACACTCGTCGAATCACGAGCGTTTGTAGATCGGAACCGAACCAACCCGGCCGGTCT 402 Query 309 GATCCGGTTCAGTTCATGAGCCATGGTGGAAGCACGGACGGAGAAGACGAGGAGATGTTC 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 403 GATCCGGTTCAGTTCATGAGCCATGGTGGAAGCACGGACGGAGAAGACGAGGAGATGTTC 462 Query 369 ATAATGGACGAGGAAGATTACACGTTGGTGACATGTCACCATGGGCCTAGTGGATCTTGT 428 |||||||||||||| |||||||||||||||||||| |||||||| || |||||||||||| Sbjct 463 ATAATGGACGAGGAGGATTACACGTTGGTGACATGCCACCATGGACCAAGTGGATCTTGT 522 Query 429 AGTACAAGGATTTATGACAAAGATGGATTTGAGTGTTTCTCAAGTAAGATCAACGATGAT 488 | ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 523 AATACAAGGGTTTATGACAAAGATGGGTTTGAGTGTTTCTCAAGTAAGATCAACGATGAT 582 Query 489 CGTCGGGAAAGACTCTTCGTGGTCGATGTCGTTACGGAATCTCCAGAGAATTCGCCGGAG 548 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 583 CGTCGGGAAAGACTTTTCGTGGTCGATGTCGTTACGGAATCTCCAGAGAATTCGCCAGAG 642 Query 549 TTTCAGGGTTTGGGTTTCCTCAATTCATGTTACTTGTGCAGGAAGAAACTTCATGGTGAA 608 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 643 TTTCAGGGTTTGGGTTTCCTCAATTCATGTTACTTGTGCAGGAAGAAACTTCATGGTCAA 702 Query 609 GACATATTTATTTACAGAGGAGAAAAAGCGTTTTGCAGCACAGAGTGTCGATCAAGTCAT 668 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 703 GACATATTTATTTACAGAGGAGAAAAAGCATTTTGCAGCACAGAGTGTCGATCGAGTCAT 762 Query 669 ATAGCAAATGAAGAAAGGAAAGAGAGATGTAGATCAAAATTCTCAACCTCTCCTTACACC 728 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 763 ATAGCAAATGATGAAAGGAAAGAGAGATGTAGATCAAAATTCTCAACCTCTCCTTACACC 822 Query 729 GCCGGCCAAATTTTCTCCACCGGAGTTCTAGTGACTTAGCCGGAGTTCTTTCTACA-AT- 786 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 823 GCCGGCCAAATTTTCTCCACCGGAGTTCTAGTGACTTAGCCGGAGTTCTT-CTACTGATG 881 Query 787 A-TT-AGGCATATACGTATGGGGGGATCGGGGGTAAATAAAGTAATTAGGCATAAATAAT 844 | || | ||||| |||||||| || ||||||||||||| |||||||||||||||||| Sbjct 882 AGTTTATATATATATATATGGGGG-ATTGGGGGTAAATAAAATAATTAGGCATAAATAAT 940 Query 845 CGGCAAAGAGAAATAAATTAGCATATA-A-ATA--CTATGACATGTATGTCCATATTATG 900 ||| ||||||||||||||||||||| | ||| ||| ||||||||||||||||||||| Sbjct 941 CGGGGCAGAGAAATAAATTAGCATATATATATATACTAAGACATGTATGTCCATATTATG 1000 Query 901 GTGGAAACGAAACAACATCGAGAAAT 926 |||||||||||||||||||||||||| Sbjct 1001 GTGGAAACGAAACAACATCGAGAAAT 1026 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45260966447 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5