BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg941819 Length=1573 Score E Sequences producing significant alignments: (Bits) Value AT5G23010.1 | Symbols: MAM1, IMS3 | methylthioalkylmalate synth... 2241 0.0 AT5G23020.1 | Symbols: MAM-L, MAM3, IMS2 | 2-isopropylmalate sy... 1513 0.0 > AT5G23010.1 | Symbols: MAM1, IMS3 | methylthioalkylmalate synthase 1 | chr5:7703092-7706896 FORWARD LENGTH=1729 Length=1729 Score = 2241 bits (1213), Expect = 0.0 Identities = 1438/1548 (93%), Gaps = 9/1548 (1%) Strand=Plus/Plus Query 1 TCTTTCTTTCTCCTACATACTCCATAGTTATGGCTTCATCACTTCTGACATCTTCCGGTA 60 ||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||||| || Sbjct 54 TCTTT-TTTCTCCTACGTACTCCATAGTGATGGCTTCATCGCTTCTGACATCTTCCGTTA 112 Query 61 TGATCCATACCACCGGTTCCACCGTGGTTGGCCGGTCAGTGTTACCCTTTCAATCTTCCC 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 113 TGATCCCTACCACCGGTTCCACCGTGGTTGGCCGGTCAGTGTTACCCTTTCAATCTTCCC 172 Query 121 TGCACTCTCTTCGTCTCACCCATCCATACAAGAAGCCGGCATAT-TTCATCTCATGTTGC 179 |||||||||| || || |||||| | |||||||| || |||| | ||||||||||||||| Sbjct 173 TGCACTCTCTCCGCCTGACCCATTCGTACAAGAACCCCGCAT-TGTTCATCTCATGTTGC 231 Query 180 TCTTCTGTATCCAAAAATGGGGCAACTAATGCTACTGATCTCAAACCCGTTGTGGAACGG 239 |||||||| |||||||||| |||||||| | ||||||||||||||||||||||||||||| Sbjct 232 TCTTCTGTGTCCAAAAATGCGGCAACTAGTTCTACTGATCTCAAACCCGTTGTGGAACGG 291 Query 240 TGGCCGGAGTACATACCAAACAAGCTCCCCGAC-AACAACTATGTGCGTGTATTCGACAC 298 ||||||||||||||||| |||||||| |||||| | ||||||||||||||||||||||| Sbjct 292 TGGCCGGAGTACATACCGAACAAGCTTCCCGACGGA-AACTATGTGCGTGTATTCGACAC 350 Query 299 GACACTCCGTGATGGTGAACAAGCTCCCGGTGGATCCCTTACTCCGCCGCAGAAGCTAGA 358 ||| |||||||| ||||||||| |||| ||||||||||| |||||||||||||||||||| Sbjct 351 GACGCTCCGTGACGGTGAACAATCTCCTGGTGGATCCCTCACTCCGCCGCAGAAGCTAGA 410 Query 359 GATTGCCCGGCAGCTTGCTAAACTCCGAGTAGACATCATGGAAGTCGGTTTTCCGGGATC 418 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 411 GATTGCCCGACAGCTCGCTAAACTCCGAGTAGACATCATGGAAGTCGGTTTTCCGGGATC 470 Query 419 ATCTGAAGAAGAGTTAGAAACCGTTAAAACTATCGCTAAGACCGTGGGGAATGAGGTGGA 478 |||||||||||||||||||||| |||| || ||||| ||||| ||||||||||||||||| Sbjct 471 ATCTGAAGAAGAGTTAGAAACCATTAAGACCATCGCCAAGACTGTGGGGAATGAGGTGGA 530 Query 479 TGAGGAAACAGGTTACGTCCCCGTAATATGCGCCATCGCACGAAGCAAACATAGAGACAT 538 ||||||||||||||||||||| || ||||||||||| || ||| |||||||||||||||| Sbjct 531 TGAGGAAACAGGTTACGTCCCTGTGATATGCGCCATAGCTCGATGCAAACATAGAGACAT 590 Query 539 TGAGGCGGCTTGGGAGGCGGTAAAGTACGCGAAGAGGCCAAGGATACTCATATTCACATC 598 ||||||| ||||||||||| | ||||||||||||||||||||||||||| |||||||||| Sbjct 591 TGAGGCGACTTGGGAGGCGCTGAAGTACGCGAAGAGGCCAAGGATACTCGTATTCACATC 650 Query 599 TACTAGTGACATTCACATGAAATATAAGTTGAAAAAGACTAAAGAAGAGGTGATTGAGAT 658 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct 651 TACTAGTGACATTCACATGAAATATAAGTTGAAAAAGACTCAAGAAGAAGTGATTGAGAT 710 Query 659 GGCCGTGAGTAGTATCAGGCTCGCTAAAAGCTTGGGCTTCAAAGACATCCAATTTGGGTG 718 ||||||||||||||| ||| | |||||||||||||||||||| |||||||| |||||||| Sbjct 711 GGCCGTGAGTAGTATTAGGTTTGCTAAAAGCTTGGGCTTCAATGACATCCAGTTTGGGTG 770 Query 719 CGAAGATGGCGGCAGGTCGGACAAGGAGTTCCTATGCAAGATTCTAGGAGAAGCAATAAA 778 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 771 CGAAGATGGCGGCAGGTCGGACAAGGATTTCCTATGCAAGATTCTAGGAGAAGCCATAAA 830 Query 779 AGCGGGTGTTACGGTGGTGAACGTCGCAGACACGGTAGGGATCAACATGCCACATGAATA 838 ||| |||||||||||||||| | ||| || ||||||||||||||||||||||||||||| Sbjct 831 AGCCGGTGTTACGGTGGTGACCATCGGTGATACGGTAGGGATCAACATGCCACATGAATA 890 Query 839 TGGAGAACTCGTAACCTATCTCAAAGCAAACACTCCTGGAATTGATGATATCGTCTTCAG 898 || |||||||| || ||||||||||||||||| ||||||||||| ||| | ||| || | Sbjct 891 CGGGGAACTCGTGACTTATCTCAAAGCAAACACCCCTGGAATTGACGATGTTGTCGTC-G 949 Query 899 -TGTTCATTGTCACAACGATCTTGGTCTTGCTACTGCCAACTCAATCGCCGGTATACGTG 957 |||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||| Sbjct 950 CTGTTCATTGTCACAACGACCTTGGTCTTGCAACCGCCAACTCAATCGCCGGTATACGTG 1009 Query 958 CGGGAGCAAGACAAGTGGAAGTAACGATCAACGGAATTGGTGAGAGAAGTGGGAATGCGT 1017 ||||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||||| Sbjct 1010 CGGGAGCAAGACAGGTCGAAGTAACTATCAACGGAATTGGTGAAAGAAGTGGCAATGCGT 1069 Query 1018 CGCTTGAAGAGGTCGTGATGGCTTTGAAATGTCGAGGAGCATATGTGATCAATGGTGTTT 1077 ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 1070 CGCTTGAGGAGGTCGTGATGGCTTTGAAATGTCGAGGGGCATATGTGATCAATGGGGTTT 1129 Query 1078 ACACAAGAATAGACACACGCCAAATTATGGCTACAAGCAAGATGGTTCAAGAGTACACCG 1137 |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||| | Sbjct 1130 ACACAAAAATAGACACACGCCAAATCATGGCTACCAGCAAGATGGTTCAAGAGTACACGG 1189 Query 1138 GCTTGTATGTTCAACCACATAAGCCCATAGTTGGAGCCAACTGTTTTGTTCATGAGAGCG 1197 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1190 GCTTGTATGTTCAAGCACATAAGCCCATAGTTGGAGCGAACTGTTTTGTTCATGAGAGCG 1249 Query 1198 GCATTCACCAGGATGGAATATTGAAAAATCGGAGTACATATGAGATCTTATCACCAGAAG 1257 ||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct 1250 GCATTCATCAGGATGGAATATTGAAAAATAGGAGTACTTATGAGATCTTATCACCAGAAG 1309 Query 1258 ATATTGGGGTCGTAAAATCTCAAAACTCCGGCCTTGTTCTTGGAAAGCTTAGTGGACGTC 1317 |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1310 ATATTGGGATTGTAAAATCTCAAAATTCCGGCCTTGTTCTTGGAAAGCTTAGTGGACGTC 1369 Query 1318 ATGCTGTGAAAGATCGGCTGAACGAGTTGGGATATGAACTCGATGATGAGAAACTGAACG 1377 | |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct 1370 ACGCTGTGAAAGATCGGCTGAAAGAGTTGGGATATGAACTCGATGATGAGAAATTGAACG 1429 Query 1378 AC-GTCTTCTCACGGTTCAGAGATCTAACCAAGCATAAAAAGAGGATCACGGATGCTGAT 1436 | |||||||||| ||||||||| |||||||| |||||||||| ||||||||||||||| Sbjct 1430 -CTGTCTTCTCACTATTCAGAGATTTAACCAAGAATAAAAAGAGAATCACGGATGCTGAT 1488 Query 1437 ATGAAGGCGTTAGTAACATCTAGCGACGAAATCTCTTTAGAGAAATTAAACGGCGCTAAC 1496 ||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 1489 TTGAAGGCATTAGTAACATCTAGCGATGAAATCTCTTTGGAGAAATTAAACGGCGCTAAC 1548 Query 1497 GGTTTAAAGTCTAACGGCTATGTACCAGTTCCTCAGGTTTCATCAAAT 1544 ||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct 1549 GGTTTAAAGTCTAACGGCTATATACCAGTTCCTCAGGTTTCATCGAAT 1596 > AT5G23020.1 | Symbols: MAM-L, MAM3, IMS2 | 2-isopropylmalate synthase 2 | chr5:7718121-7721839 FORWARD LENGTH=1799 Length=1799 Score = 1513 bits (819), Expect = 0.0 Identities = 1257/1467 (86%), Gaps = 35/1467 (2%) Strand=Plus/Plus Query 1 TCTTTCTTTCTCCTACATACTCCATAGTTATGGCTTCATCACTTCTGACATCTTCCG-GT 59 ||||| | |||||||| | ||| ||||| |||||||| | |||||| ||||| | || || Sbjct 55 TCTTT-TCTCTCCTACTTTCTCTATAGTAATGGCTTCGTTACTTCTCACATCGT-CGAGT 112 Query 60 ATGATCCATACCAC-CGGT-TC-CACCGTGGTTGGCCGGTCAGTGTTACCCTTTC-AATC 115 ||||| | ||||| | | || | || ||||| |||||||| ||||||| || ||| Sbjct 113 ATGAT--A-ACCACTAGCTGTCGCTCCATGGTTCTCCGGTCAGGGTTACCC-ATCGGATC 168 Query 116 TTCCCTGCACTCTCTTCGTCTCACCCATCCATACAAGAAGCCGGCATAT-TTCATCTCAT 174 ||| | | ||||||||| || |||| ||||||| | ||| || | | | ||| |||||| Sbjct 169 TTCTTTTCCCTCTCTTCGCCTGACCCGTCCATACGACAAGGCGAC-TCTGTTCGTCTCAT 227 Query 175 GTTGCTCTTCTGTA-TCCAAAAATGG-GGCAACTAATGCTACTGATCTCAAACCCGTTGT 232 ||||||| ||| | |||||||| || |||||||| |||||||||||||||||| | | Sbjct 228 GTTGCTCCGCTG-AGTCCAAAAA-GGTGGCAACTAGTGCTACTGATCTCAAACCTATCAT 285 Query 233 GGAACGGTGGCCGGAGTACATACCAAACAAGC-TCCCCGACAACAACTATGTGCGTGTAT 291 ||||||| ||||||||||||| || ||||||| ||||| |||| |||||||||||||||| Sbjct 286 GGAACGGAGGCCGGAGTACATTCCGAACAAGCTTCCCC-ACAAGAACTATGTGCGTGTAT 344 Query 292 TCGACACGACACTCCGTGATGGTGAACAAGCTCCCGGTGGATCCCTTACTCCGCCGCAGA 351 | |||||||| || ||||| ||||||||| ||||||||| | | |||||||| ||||||| Sbjct 345 TAGACACGACGCTTCGTGACGGTGAACAATCTCCCGGTGCAGCACTTACTCCACCGCAGA 404 Query 352 AGCTAGAGATTGCCCGGCAGCTTGCTAAACTCCGAGTAGACATCATGGAAGTCGGTTTTC 411 || ||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 405 AGTTAGAGATTGCCAGGCAGCTAGCTAAACTCCGAGTAGACATCATGGAAGTTGGTTTTC 464 Query 412 CGG-GATCATCTGAAGAAGAGTTAGAAACCGTTAAAACTATCGCTAAGACCGTGGGGAAT 470 ||| | || ||||| ||||| || ||| | ||||||| ||||| |||||||||||||| Sbjct 465 CGGTG-TCGTCTGAGGAAGAATTCGAAGCTATTAAAACCATCGCCAAGACCGTGGGGAAC 523 Query 471 GAGGTGGATGAGGAAACAGGTTACGTCCCCGTAATATGCGCCATCGCACGAAGCAAACAT 530 ||||||||||||||||| |||||||| || || ||||||| ||| |||||| ||||| | Sbjct 524 GAGGTGGATGAGGAAACCGGTTACGTTCCTGTGATATGCGGCATTGCACGATGCAAAAAG 583 Query 531 AGAGACATTGAGGCGGCTTGGGAGGCGGTAAAGTACGCGAAGAGGCCAAGGATACT-CAT 589 |||||||| ||||| |||||||||| | ||||| ||||||||||| ||| || | | | Sbjct 584 AGAGACATCGAGGCAACTTGGGAGGCACTGAAGTATGCGAAGAGGCCGAGGGTAATGC-T 642 Query 590 ATTCACATCTACTAGTGACATTCACATGAAATATAAGTTGAAAAAGACTAAAGAAGAGGT 649 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 643 ATTCACATCTACTAGTGAAATTCACATGAAATATAAGTTGAAAAAGACTAAAGAAGAAGT 702 Query 650 GATTGAGATGGCCGTGAGTAGTATCAGGCT-CGCTAAAAGCTTGGGCTTCAAAGACATCC 708 ||| ||||||||||||| ||| | | | | ||||||||||||||||||||||||||||| Sbjct 703 GATCGAGATGGCCGTGAACAGTGTTAAG-TACGCTAAAAGCTTGGGCTTCAAAGACATCC 761 Query 709 AATTTGGGTGCGAAGATGGCGGCAGGTCGGACAAGGAGTTCCTATGCAAGATTCTAGGAG 768 |||||||||||||||||||||||||| |||| || || || |||| ||||||||||||| Sbjct 762 AATTTGGGTGCGAAGATGGCGGCAGGACGGAGAAAGATTTTATATGTAAGATTCTAGGAG 821 Query 769 AAGCAATAAAAGCGGGTGTTACGGTGGTGAACG-TCGCAGACACGGTAGGGATCAACATG 827 || | ||||||||||||| || |||| | | || |||||||| |||||||||||| Sbjct 822 AATCGATAAAAGCGGGTGCAACCACGGTG-GGGTTTGCGGACACGGTCGGGATCAACATG 880 Query 828 CCACATGAATAT-GGAGAACTCGTAACCTATCTCAAAGCAAACACTCCTGGAATTGATGA 886 || || |||| | ||||||||||| ||||| ||| || ||||||||| || |||||| Sbjct 881 CCGCAAGAAT-TCGGAGAACTCGTGGCCTATGTCATAGAAAACACTCCAGGGGCTGATGA 939 Query 887 TATCGTCTTCAG-TGTTCATTGTCACAACGATCTTGGTCTTGCTACTGCCAACTCAATCG 945 ||| |||||| | |||||||||| ||||| |||||| ||||||| |||||| |||| Sbjct 940 TATTGTCTTC-GCCATTCATTGTCATAACGACCTTGGTGTTGCTACCGCCAACACAATAT 998 Query 946 CCGGTATACGTGCGGGAGCAAGACAAGTGGAAGTAACGATCAACGGAATTGGTGAGAGAA 1005 |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| |||| Sbjct 999 CCGGTATATGTGCGGGAGCAAGACAAGTCGAAGTGACGATCAACGGAATTGGTGAAAGAA 1058 Query 1006 GTGGGAATGCGTCGCTTGAAGAGGTCGTGATGGCTTTGAAATGTCGAGGAGCATATGTGA 1065 ||||||||||| ||||||||||||||||||||||||||||||||||||||| || | ||| Sbjct 1059 GTGGGAATGCGCCGCTTGAAGAGGTCGTGATGGCTTTGAAATGTCGAGGAGAATCTCTGA 1118 Query 1066 TCAATGGTGTTTACACAAGAATAGACACACGCCAAATTATGGCTACAAGCAAGATGGTTC 1125 | ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct 1119 TGGATGGTGTTTACACAAAAATAGACTCACGCCAAATTATGGCTACAAGCAAGATGGTTC 1178 Query 1126 AAGAGTACACCGGCTTGTATGTTCAACCACATAAGCCCATAGTTGGAGCCAACTGTTTTG 1185 ||||| | |||||| |||||||||||||||||||||| |||||||||| ||||||||||| Sbjct 1179 AAGAGCATACCGGCATGTATGTTCAACCACATAAGCCAATAGTTGGAGACAACTGTTTTG 1238 Query 1186 TTCATGAGAGCGGCATTCACCAGGATGGAATATTGAAAAATCGGAGTACATATGAGATCT 1245 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1239 TTCATGAGAGCGGCATTCACCAGGATGGAATATTGAAAAATCGAAGTACATATGAGATCT 1298 Query 1246 TATCACCAGAAGATATTGGGGTCGTAAAATCTCAAAACTCCGGCCTTGTTCTTGGAAAGC 1305 |||||||||||||| ||||| ||||||||||| |||| || ||| ||||||||||||||| Sbjct 1299 TATCACCAGAAGATGTTGGGATCGTAAAATCTGAAAATTCTGGCATTGTTCTTGGAAAGC 1358 Query 1306 TTAGTGGACGTCATGCTGTGAAAGATCGGCTGAACGAGTTGGGATATGAACTC-GATGAT 1364 |||| |||||||||||||| ||||| ||||| || ||||||||||||||| || | |||| Sbjct 1359 TTAGCGGACGTCATGCTGTAAAAGACCGGCTTAAAGAGTTGGGATATGAAATCAG-TGAT 1417 Query 1365 GAGAAACTGAACGACGTCTTCTCACGGTTCAGAGA-TCTAACCAAGCATAAAAAGAGGAT 1423 |||||| | |||||| |||||||||| | |||||| | |||| ||| | |||||||| || Sbjct 1418 GAGAAATTCAACGACATCTTCTCACGATACAGAGAAT-TAACGAAGGACAAAAAGAGAAT 1476 Query 1424 CACGGATGCTGATATGAAGGCGTTAGT 1450 ||| || |||||| ||||||| ||||| Sbjct 1477 CACAGACGCTGATCTGAAGGCATTAGT 1503 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 77660243115 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5