BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg942850 Length=955 Score E Sequences producing significant alignments: (Bits) Value AT4G10380.1 | Symbols: NIP5;1, NLM6, NLM8 | NOD26-like intrinsi... 1500 0.0 > AT4G10380.1 | Symbols: NIP5;1, NLM6, NLM8 | NOD26-like intrinsic protein 5;1 | chr4:6431236-6434822 REVERSE LENGTH=1521 Length=1521 Score = 1500 bits (812), Expect = 0.0 Identities = 906/953 (95%), Gaps = 0/953 (0%) Strand=Plus/Plus Query 3 AAAAAATAAACGTTGGAAATGGCTCCACCGGAGGCTGAGGTGGGTTCGGTTGTGGTGATG 62 |||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct 295 AAAAAAAAAACGTTGGAAATGGCTCCACCGGAGGCTGAGGTGGGTGCGGTAATGGTGATG 354 Query 63 GCTCCTCCTACCCCGGGAACGCCGGGAACACCGGGAGGGCCGTTGATCACGGGAATGAGA 122 |||||||| || ||||| || ||||||||||||||||| |||||||||||||| |||||| Sbjct 355 GCTCCTCCAACGCCGGGGACACCGGGAACACCGGGAGGACCGTTGATCACGGGGATGAGA 414 Query 123 GTGGATTCAATGTCATTCGATCATCGGAAACCAACGCCTCGATGCAAATGCTTGCCGGTG 182 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 415 GTGGATTCAATGTCGTTTGATCATCGGAAACCAACGCCTCGATGCAAATGCTTGCCGGTG 474 Query 183 ATGGGATCAACTTGGGGTCAACATGACACATGTTTCACCGATTTTCCCTCTCCTGATGTC 242 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 475 ATGGGATCAACTTGGGGTCAACATGACACATGCTTCACCGATTTTCCCTCTCCTGATGTC 534 Query 243 TCCCTCACTCGCAAGCTTGGAGCCGAGTTCGTGGGAACATTCATCTTGATATTCACCGCG 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 535 TCCCTCACTCGCAAGCTTGGAGCCGAGTTCGTGGGAACATTCATCTTGATATTCACCGCG 594 Query 303 ACAGCCGGTCCAATCGTGAACCAGAAATACGACGGAGCAGAAACCCTAATCGGTAACGCG 362 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 595 ACAGCCGGTCCAATCGTGAACCAGAAATACGATGGAGCAGAAACCCTAATCGGTAACGCT 654 Query 363 GCATGCGCAGGACTCGCAGTGATGATCATAATACTATCAACGGGTCACATCTCAGGGGCT 422 ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| Sbjct 655 GCATGCGCAGGACTCGCAGTGATGATCATAATACTCTCAACAGGTCATATCTCAGGGGCT 714 Query 423 CATCTAAACCCATCACTGACCATAGCATTCGCAGCTCTAAGGCACTTCCCTTGGGCTCAC 482 || ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 715 CACCTAAACCCATCACTGACCATAGCATTCGCTGCTCTAAGGCACTTCCCTTGGGCACAC 774 Query 483 GTGCCTGCTTACATTGCAGCTCAAGTCTCAGCTTCCATTTGTGCTTCATTCGCACTTAAA 542 || ||||||||||| || ||||||||||||||||||||||| |||||||||||||||||| Sbjct 775 GTCCCTGCTTACATAGCGGCTCAAGTCTCAGCTTCCATTTGCGCTTCATTCGCACTTAAA 834 Query 543 GGAGTGTTCCATCCTTTTATGTCCGGAGGTGTCACTGTTCCATCTGTTAGCCTCGGACAA 602 |||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||| Sbjct 835 GGAGTGTTCCATCCTTTTATGTCCGGTGGTGTCACTATTCCATCTGTTAGCCTTGGACAA 894 Query 603 GCCTTTGCTCTTGAGTTCATCATCACTTTCATTCTCCTCTTTGTCGTCACTGCCGTCGCC 662 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 895 GCCTTTGCTCTTGAGTTCATCATCACTTTCATTCTCCTCTTTGTTGTAACTGCCGTCGCT 954 Query 663 ACCGACACTCGTGCCGTTGGAGAATTAGCAGGTATAGCTGTTGGAGCCACGGTCATGCTC 722 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 955 ACCGACACTCGTGCCGTTGGAGAATTGGCAGGTATAGCCGTTGGAGCCACGGTCATGCTC 1014 Query 723 AACATTCTAGTCGCAGGGCCATCGACTGGTGGATCTATGAATCCCGTGAGGACTCTAGGA 782 || ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 1015 AATATTCTAGTCGCAGGGCCATCGACTGGTGGATCTATGAATCCTGTGAGAACTCTAGGA 1074 Query 783 CCAGCCGTTGCATCAGGAAACTATAGGGCAGTTTGGGTTTATCTGGTGGCTCCTACACTT 842 ||||||||||||||||||||||||||| || | ||||| ||||||||||||||||||||| Sbjct 1075 CCAGCCGTTGCATCAGGAAACTATAGGTCACTATGGGTGTATCTGGTGGCTCCTACACTT 1134 Query 843 GGTGCAATATCCGGTGCAGCCGTCTACACAGGTGTTAAACTTAACGATAGCGAGACCGAC 902 ||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| ||| ||| Sbjct 1135 GGTGCCATATCTGGTGCAGCGGTCTACACAGGTGTTAAGCTTAACGATAGCGTGACTGAC 1194 Query 903 CCGCCTCGTCAGGTTAGGAGCTTTCGTCGTTAAGTGAGTGAGAGACTTGTTTA 955 |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1195 CCGCCTCGTCCGGTTAGGAGCTTTCGTCGTTAAGTGAGTGAGAGACTTGTTTA 1247 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46717756710 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5