BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg942897 Length=2110 Score E Sequences producing significant alignments: (Bits) Value AT4G10760.1 | Symbols: EMB1706, MTA | mRNAadenosine methylase |... 3378 0.0 AT1G37010.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 84.2 5e-15 > AT4G10760.1 | Symbols: EMB1706, MTA | mRNAadenosine methylase | chr4:6619817-6623351 REVERSE LENGTH=2227 Length=2227 Score = 3378 bits (1829), Expect = 0.0 Identities = 2016/2106 (96%), Gaps = 13/2106 (1%) Strand=Plus/Plus Query 1 AATTCTTTTGTTTCGAAGCCATGGAAACTGAATCGGATGACGCCACCATTACCGTCGTCA 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 20 AATTCTTTTGTTTCGAAGCCATGGAAACTGAATCTGATGACGCCACCATTACCGTCGTCA 79 Query 61 AAGACATGAGAGCTCGATTAGAGAATCGAATTCGAACCCAACACGACGCTCACTTAGATC 120 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 80 AAGACATGAGAGTTCGATTAGAGAATCGAATTCGAACCCAACACGACGCTCACTTAGATC 139 Query 121 TTCTTTCTTCACTCCAATCCATTGTTCCCGACATAGTCCCATCTCTCGATCTCTCACTCA 180 | ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 140 TCCTTTCCTCACTCCAATCCATTGTTCCCGATATAGTCCCATCTCTCGATCTCTCACTCA 199 Query 181 AACTCATCTCTTCTTTCACCAATCGACCTTTCGTCGCTACACCTCCATTACCCGAACCCA 240 ||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||||| Sbjct 200 AACTCATCTCTTCTTTCACGAATCGACCTTTCGTAGCTACACCACCATTACCAGAACCCA 259 Query 241 AAGTGGAGAAGAAGCATCATCCAATTGTTAAATCAGGAACCCAACAACAACAATTACATG 300 |||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||| Sbjct 260 AAGTTGAGAAGAAGCATCATCCGATTGTTAAATTAGGAACCCAACTGCAACAATTACATG 319 Query 301 GGCATGATTCAAAATCGATGCTTGTTGATTCGAATCAGAGAGATTCTGGTTCTGGTGTTG 360 ||||||||||||||||||||||||||||||||||||||||||| | | | || Sbjct 320 GGCATGATTCAAAATCGATGCTTGTTGATTCGAATCAGAGAGA---T-G--C------TG 367 Query 361 AAGCTGATGGGTCTAGTGGGAGTCCTATGGTGCTTGTTAGAGCTATGGTTGCTGAGTGTT 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 368 AAGCTGATGGGTCTAGTGGGAGTCCTATGGCGCTTGTTAGAGCTATGGTTGCTGAGTGTT 427 Query 421 TGCTTCAACGAGTACCGTTTTCGCCTACGGATTCGTCTACTGTGCTTAGGAAGCTTGAGA 480 |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 428 TGCTTCAACGTGTACCGTTTTCTCCTACGGATTCTTCTACTGTGCTTAGGAAGCTTGAGA 487 Query 481 ATGACCAGAATGCGAGACCGGCGGAGAAGGCGGCGTTACGGGATTTAGGCGGTGAATGCG 540 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct 488 ATGACCAGAATGCTAGACCGGCGGAGAAGGCGGCGTTACGAGATTTAGGCGGTGAATGTG 547 Query 541 GGCCGATTCTTGCGGTGGAAACCGCGCTTAAATCGATGGCGGAAGAGAATGGTTCTGTGG 600 | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 548 GACCGATTCTTGCGGTGGAGACCGCACTTAAATCGATGGCGGAAGAGAATGGTTCTGTGG 607 Query 601 AATTGGAAGAGTTTGAGGTTAGTGGGAAGCCTAGAATCATGGTTTTGGCTATTGATAGAA 660 |||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct 608 AATTGGAAGAGTTTGAGGTTAGTGGGAAGCCTAGGATCATGGTTTTAGCTATAGATAGAA 667 Query 661 CTAGATTGCTTAAAGAGTTACCAGAGAGTTTCCAGGGGAATAACGAATCGAATCGGGTTG 720 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 668 CTAGATTGCTTAAAGAGTTACCAGAGAGTTTCCAAGGGAATAACGAATCGAATCGGGTTG 727 Query 721 TCGAAACGCCTAATTTGGTTGAGAATTCAACGGTTTCTGCTGGCGGGTTTGGGGTTTCCG 780 ||||||||||||||| |||||||| | || ||||||| |||||||||||| ||||||| Sbjct 728 TCGAAACGCCTAATTCAATTGAGAATGCTACTGTTTCTGGTGGCGGGTTTGGTGTTTCCG 787 Query 781 GGTCGGGTAATTTCCCGAGGCCTGAGATGTGGGGAGGTGATCCTAATATGGGGTTTAGGC 840 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 788 GGTCGGGTAATTTCCCGAGACCTGAGATGTGGGGAGGTGATCCTAATATGGGGTTTAGGC 847 Query 841 CGATGATGAATGCACCAAGAGGAATGCAAATGATGGGAATGCATCATCCAATGGGGATAA 900 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 848 CAATGATGAATGCACCAAGAGGAATGCAAATGATGGGAATGCATCATCCAATGGGGATAA 907 Query 901 TGGGTAGACCACCACCGTTTCCTTTGTCTTTGCCGTTGCCTGTACCGTCGAATCAGAAGC 960 |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 908 TGGGTAGACCACCACCATTTCCTTTGCCTTTGCCGTTGCCTGTACCGTCGAATCAGAAGC 967 Query 961 TTAGAAGCGAAGAAGATGATTTGAAAGACGTTGAAGCTCTTTTGAGTAAGAAGTCTTTTA 1020 ||||||| || ||||| ||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 968 TTAGAAGTGAGGAAGAGGATTTGAAAGATGTTGAGGCTCTTTTGAGTAAGAAGTCTTTTA 1027 Query 1021 AGGAGAAGCAACAGTCAAGGACTGGTGAGGAGTTGCTTGACCTTATTCACCGTCCAACCG 1080 |||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||| Sbjct 1028 AGGAGAAGCAACAGTCTAGGACAGGTGAGGAGTTGCTTGATCTGATTCACCGTCCAACCG 1087 Query 1081 CTAAAGAAGCCGCTACCGCTGCTAAGTTTAAAAGCAAAGGAGGATCACAGGTTAAGTATT 1140 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1088 CTAAAGAAGCCGCTACTGCTGCTAAGTTTAAAAGCAAAGGAGGATCACAGGTTAAGTATT 1147 Query 1141 ACTGTAGGTATTTAACTAAAGAGGATTGCCGTCTTCAGTCTGGTTCTCACATAGCCTGCA 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1148 ACTGTAGGTATTTAACTAAAGAGGATTGCCGTCTTCAGTCTGGTTCTCACATAGCCTGCA 1207 Query 1201 ACAAGAGACATTTCCGTCGACTAATCGCTTCACATACCGACGTTAGCCTAGGAGATTGTT 1260 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1208 ACAAGAGACATTTCCGTCGACTAATCGCTTCACATACTGACGTTAGCCTAGGAGATTGTT 1267 Query 1261 CCTTTCTCGATACTTGTCGTCACATGAAGACTTGCAAATACGTGCATTACGAGCTCGACA 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1268 CCTTTCTCGATACTTGTCGTCACATGAAGACTTGCAAATACGTGCATTACGAGCTCGACA 1327 Query 1321 TGGCTGACGCTATGATGACTGGTCCAGACAAAGCATTGAAGCCACTGCGTGCTGATTACT 1380 ||||||||||||||||| |||||||||| || ||||||||||| || ||||||||||||| Sbjct 1328 TGGCTGACGCTATGATGGCTGGTCCAGATAAGGCATTGAAGCCTCTACGTGCTGATTACT 1387 Query 1381 GTTCCGAAGCTGAACTTGGTGAAGCACAATGGATAAACTGCGATATCCGTTCTTTTCGAA 1440 |||| ||||||||||||||||| ||||||||||| ||||| || |||||||||||||||| Sbjct 1388 GTTCTGAAGCTGAACTTGGTGAGGCACAATGGATTAACTGTGACATCCGTTCTTTTCGAA 1447 Query 1441 TGGACATTTTGGGAACTTTTGGAGTTGTTATGGCGGATCCACCATGGGACATTCACATGG 1500 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1448 TGGACATTTTGGGAACCTTTGGAGTTGTTATGGCGGATCCACCATGGGACATTCACATGG 1507 Query 1501 AACTTCCATATGGAACAATGGCTGATGACGAGATGCGCACTCTGAATGTTCCCTCGTTGC 1560 ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||| | Sbjct 1508 AACTTCCATATGGAACAATGGCTGATGACGAAATGCGAACTCTTAATGTTCCCTCGTTAC 1567 Query 1561 AGACTGATGGTTTGATTTTCCTCTGGGTCACTGGTCGTGCAATGGAGCTAGGCCGTGAAT 1620 ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct 1568 AGACTGACGGTTTGATTTTCCTCTGGGTCACTGGTCGTGCTATGGAACTAGGCCGTGAAT 1627 Query 1621 GTTTGGAGCTTTGGGGATACAAGCGAGTGGAAGAGATCATATGGGTAAAGACGAATCAGC 1680 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 1628 GTTTGGAGCTTTGGGGATACAAGCGAGTGGAAGAGATCATATGGGTAAAGACAAATCAAC 1687 Query 1681 TTCAACGTATTATTCGAACAGGAAGAACAGGTCACTGGCTCAACCATAGCAAAGAACATT 1740 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1688 TTCAACGTATTATTCGAACAGGAAGAACAGGTCACTGGCTCAACCATAGCAAAGAGCATT 1747 Query 1741 GTCTGGTTGGAATCAAAGGAAACCCAGAAGTGAACAGAAACATCGACACAGATGTGATTG 1800 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1748 GTCTGGTTGGAATCAAAGGAAATCCAGAAGTGAACAGAAACATCGACACAGATGTGATTG 1807 Query 1801 TTGCAGAGGTTAGAGAAACAAGCCGGAAGCCAGACGAGATGTATGCAATGTTAGAGAGGA 1860 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1808 TCGCAGAGGTTAGAGAAACAAGCCGGAAGCCAGACGAGATGTATGCAATGTTAGAGAGGA 1867 Query 1861 TCATGCCAAGAGCAAGAAAACTCGAGTTATTCGCTCGTATGCACAATGCTCATGCCGGAT 1920 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct 1868 TCATGCCAAGAGCAAGAAAGCTCGAGTTATTCGCCCGTATGCACAATGCTCATGCCGGAT 1927 Query 1921 GGCTATCACTTGGGAACCAGCTTAACGGTGTCCGATTAATAAACGAAGGTCTTCGAGCTC 1980 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1928 GGCTATCACTTGGGAACCAGCTTAACGGTGTCCGATTAATAAACGAAGGTCTTCGAGCTC 1987 Query 1981 GGTTTAAAGCATCATACCCTGAAATAGATGTCCAGCCACCATCACCACCAAGAGCCTCTG 2040 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1988 GGTTTAAAGCATCATACCCTGAAATAGATGTCCAGCCACCATCACCACCAAGAGCCTCTG 2047 Query 2041 CAATGGAAACAGAAAACGAACCAATGGCTATTGACTCAATCACAGCTTAGTTCAATTC-a 2099 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2048 CAATGGAAACAGACAACGAACCAATGGCTATTGACTCAATCACAGCTTAGTTCAATTCCA 2107 Query 2100 aaaaaa 2105 |||||| Sbjct 2108 AAAAAA 2113 > AT1G37010.1 | Symbols: | BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 15 Blast hits to 15 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:14040918-14041227 FORWARD LENGTH=264 Length=264 Score = 84.2 bits (45), Expect = 5e-15 Identities = 52/55 (95%), Gaps = 1/55 (2%) Strand=Plus/Plus Query 1629 CTTTGGGGATACAAGCGAGTGGAAGAGATCATATGGGTAAAGACGAATCAGCTTC 1683 |||| ||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 57 CTTT-GGGATACAAACGAGTGGAAGAGATCATATGGGTAAAGACGAATCAACTTC 110 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 104617935780 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5