BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg943129
Length=2297
Score E
Sequences producing significant alignments: (Bits) Value
AT4G12290.1 | Symbols: | Copper amine oxidase family protein |... 3367 0.0
AT4G12280.1 | Symbols: | copper amine oxidase family protein |... 1062 0.0
AT4G12270.1 | Symbols: | Copper amine oxidase family protein |... 918 0.0
> AT4G12290.1 | Symbols: | Copper amine oxidase family protein
| chr4:7304405-7307138 FORWARD LENGTH=2420
Length=2420
Score = 3367 bits (1823), Expect = 0.0
Identities = 2149/2302 (93%), Gaps = 40/2302 (2%)
Strand=Plus/Plus
Query 1 CAAAACaaaaaaaaaCCTGACATGGACCAAAAAAGCTTTTTCCGGTTGATTTTTCTCATA 60
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 9 CAAAACAAAAAAAAAGTTGACATGGACCAAAAAAGCTTTTTCCGGTTGATTTTTCTCATA 68
Query 61 GTCACAGCTGGTTTCATTATCTCTTTTACTTCCACTTACTTCTCTCACGCGACGTCGTCT 120
||||||||||||||||| ||||| || ||||||||| ||||| |||||||| | ||
Sbjct 69 GTCACAGCTGGTTTCATCATCTCCTTCACTTCCACTAACTTCCCTCACGCG-C--CG--- 122
Query 121 ACGACGGGGATTCTTGATTGCACCGACTCTTCTTCTTCACCTCTTTGCGCTTCTAGAAAC 180
|||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 123 ACGA---GGCTTCTTGATTGCACCGACTCTTCTTCTTCACCTCTTTGCGCTTCGAGAAAC 179
Query 181 TTTCTTTTCAACAAACAACAACCACGTCCCATTCCTAAACACGATCCTAAACCAAAAACC 240
|||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||
Sbjct 180 TTTCTTTTCAACAAACAACAACCACGACCTATTCCTAAACATGATCCTAAACCAAATACC 239
Query 241 AAAAACCATGATCACGTCTCCGATACACCAAACCATCCTCTAGACCCACTCACGGTGGT- 299
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 240 AAAAACCATGATCACGTGTCCGATACACCAAACCATCCTCTAGACCCACTCACGGT-GTC 298
Query 300 GGAGATTAACAAAGTCCGATCAATACTCAAC-TCTCACGCGCTATTCACCTCCGGTACAC 358
||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||||
Sbjct 299 GGAGATTAACAAAATCCGATCAATACTC-TCTTCTCACGCGCTATTCACTTCCGGTACAC 357
Query 359 CACACGCGCTCCACACCGTCGTTCTTGAAGAGCCTGACAAGAATCTTGTCCGTCACTGGG 418
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 358 CACACGCGCTCCACACCGTCGTTCTTGAAGAGCCTGAGAAGAATCTTGTCCGTCACTGGG 417
Query 419 AAAAAGGTAACCCACTTCCTCCGAGGAAAGCTTCCGTCATCGCACGTGTTGGCCTC-AAC 477
||||||| |||||||||||||||||||||||||||||||||||||||||||| | | ||
Sbjct 418 AAAAAGGGAACCCACTTCCTCCGAGGAAAGCTTCCGTCATCGCACGTGTTGG-CGCGGAC 476
Query 478 ACGCACGTGCTCACCGTTGATATCTCTACGGGTCGGGTAGATTCAGAGAATAGCCCGGTT 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 477 ACGCACGTGCTCACCGTTGATATCTCTACGGGTCGGGTAGATTCAGAGAATAGCCCGGTT 536
Query 538 AGTGTTTCGGGTTACCCGATGATGACTATCGAGGAGATGAACGCTATGACTGTTGCACCG 597
||||||| |||||||||||||||||||| || |||||||||| ||| ||||||| |||
Sbjct 537 CGTGTTTCTGGTTACCCGATGATGACTATAGAAGAGATGAACGATATCACTGTTGTACCA 596
Query 598 TTCGCAAACGCAGATTTCAACCGTACGATCATCTCTCGTGGAATTAATCTAACGGACGTG 657
|| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 597 TTTTCAAACGCGGATTTCAACCGTACGATCATCTCTCGTGGAGTTAATCTAACGGACGTG 656
Query 658 ATTTGTTTCCCAATCTCTTGTGGTTGGTTTGGTAATAAAGAAGAAAACGCGAGGGTTATT 717
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 657 ATTTGTTTCCCAATCTCTTGTGGTTGGTTTGGTAATAAAGAAGAAAACGCGAGGGTAATT 716
Query 718 AAAAGTCAGTGTTTCTTGACACAAGGAACACCTAACTTCTACATGCGTCCTATCGAAGGT 777
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 717 AAAAGTCAGTGTTTCATGACACAAGGAACACCTAACTTCTACATGCGTCCTATCGAAGGT 776
Query 778 TTAACCATCCTTGTCGATTTAGATACAAAGCAAGTGATCGAGATATCCGATACGGGTCGG 837
|||||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 777 TTAACCATTCTCATCGATTTAGATACAAAGCAAGTGATCGAGATAACCGATACAGGTCGG 836
Query 838 GCTATACCCATACCCGGTTCAACCAATACCGATTACCGCTTCGAAAAACTCGTGACCACC 897
|||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||
Sbjct 837 GCTATACCCATACCCGGTTCAACCAATACCGATTACCGCTTCCAAAAGCTCGCAACCACC 896
Query 898 GACAAAAGC-CGACTTCTCAACCCCATATCCATCGAGCAGCCACGTGGTCCAAGCTTCGT 956
||||||| | || | ||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct 897 GACAAAA-CTCGGCCTCTAAACCCGATATCCATTGAGCAGCCACGTGGTCCAAGCTTCGT 955
Query 957 AATCGAAGACAACCATCTAGTGAAATGGGCAAATTGGGAATTTCATCTAAAACCCGACCC 1016
|| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 956 GATAGAGGACAACCATCTAGTGAAATGGGCAAATTGGGAATTTCATCTAAAACCTGACCC 1015
Query 1017 GAGAGCAGGTGTGGTTATATCACTGGTCAGAGTACACGACCCGGATACTCAAGAGACACG 1076
||||||||||||||| ||||||| ||| ||||||||||||||||||||||| ||||||||
Sbjct 1016 GAGAGCAGGTGTGGTAATATCACGGGTAAGAGTACACGACCCGGATACTCATGAGACACG 1075
Query 1077 TGACGTGATGTACAAAGGGTTT-GTGTCGGAGCTTTTTGTTCCGTACATGGATCCATCGG 1135
|||||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||
Sbjct 1076 TGACGTGATGTACAAA-GGTTTCGTGTCTGAACTTTTTGTTCCGTACATGGATCCATCGG 1134
Query 1136 ACGCGTGGTACTTCAAGACTTACATGGACGCAGGGGAATACGGGTTCGGGTTACAAGCCA 1195
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1135 ACGCGTGGTACTTTAAGACTTACATGGACGCAGGGGAATACGGGTTCGGGTTACAAGCCA 1194
Query 1196 TGCCACTCGTACCACTTAATGATTGTCCACGAAACGCAGCATATATGGACGGAGTTTTCG 1255
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1195 TGCCACTCGTACCGCTTAATGATTGTCCACGAAACGCAGCCTATATGGACGGAGTTTTCG 1254
Query 1256 CGGCGGCCGATGGAACACCGTTTGTGAGAGAAAACATGGTTTGTATCTTTGAGAGTTATG 1315
| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1255 CCGCAGCCGATGGAACACCGTTCGTGAGAGAAAACATGGTTTGTATCTTTGAGAGTTACG 1314
Query 1316 CCGGAGATATTGGGTGGCGTCACTCCGAAAGTCCCATCACCGGTATACCGATAAGGGAAG 1375
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1315 CCGGAGATATTGGGTGGCGTCACTCCGAAAGCCCCATCACCGGTATACCGATAAGGGAAG 1374
Query 1376 TGAGACCAAAAGTGACGCTAGTGGTACGAATGGCAGCTTCGGTAGGTAACTATGATTACA 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1375 TGAGACCAAAAGTGACGCTAGTGGTACGAATGGCAGCTTCGGTAGGTAACTATGATTACA 1434
Query 1436 TCATTGATTACGAGTTCCAAACTGATGGGCTTATAAAAGCTAAGGTTGGGCTCAGTGGAA 1495
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 1435 TCATTGATTACGAGTTCCAAACTGATGGGCTTATAAAAGCTAAGGTCGGGCTAAGTGGAA 1494
Query 1496 TACTAATGGTGAAAGGGACACCATATCAAAACAAGAACCAAGTGGAGAAAGATAAAGATG 1555
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
Sbjct 1495 TACTAATGGTGAAAGGGACAACATATCAAAACAAAAACCAAGTGGAGAAAGATAAAGACG 1554
Query 1556 GTAATGAAGAAGAGCTTCACGGCACGCTTCTGTCTGAAAATGTAATCGGAGTAATTCATG 1615
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct 1555 GTAATGAAGAAGAGCTTCACGGCACGCTTCTGTCTGAAAATGTAATTGGAGTAATACACG 1614
Query 1616 ATCACTACGTCACTTTTTACCTTGATCTCGATGTCGATGGCCCGGATAATTCATTTGTTA 1675
||||||||||||||||||||||||| || || |||||||||||||| || ||||||||||
Sbjct 1615 ATCACTACGTCACTTTTTACCTTGACCTTGACGTCGATGGCCCGGACAACTCATTTGTTA 1674
Query 1676 AAGTGAACCTCAAGAGGCAAGAGACTGAGCCAGGTGAGTCACCGAGGAAAAGTTACCTGA 1735
||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| |
Sbjct 1675 AAGTGAATCTCAAGAGGCAAGAGACCGAGCCAGGCGAGTCACCGAGGAAAAGTTACCTAA 1734
Query 1736 AAGCTGTTAGGAACATTGCGAAAACCGAAAAAGATGGTCAGATCAAGCTAAGCTTGTATG 1795
||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
Sbjct 1735 AAGCTGTTAGGAACATTGCGAAAACCGAAAAGGATGGTCAGATCAAGCTTAGCTTGTACG 1794
Query 1796 ATCCATCGGAATTCCACGTCATCAACTCTGGTAAATCTACTCGGGTCGGAAACCCAACGG 1855
||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| ||||
Sbjct 1795 ATCCATCAGAATTCCACGTCATCAACTCTGGTAAAACCACTCGGGTCGGAAACCCGACGG 1854
Query 1856 GTTATAAGGTCGTTCCAAGAACTACGGCAGCTAGTCTACTTGACCATGATGATCCACCGC 1915
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 1855 GTTATAAGGTCGTTCCTAGAACGACGGCAGCTAGTCTACTTGACCATGATGATCCGCCGC 1914
Query 1916 AGAAGAGAGGAGCTTTTACTAATAACCAAATTTGGGTTACTCCATACAATAAGTCCGAGC 1975
||||||||||||||||||| || |||||||||||||| ||||| ||||||||||| ||||
Sbjct 1915 AGAAGAGAGGAGCTTTTACCAACAACCAAATTTGGGTCACTCCGTACAATAAGTCGGAGC 1974
Query 1976 AATGGGCTGGTGGCTTGTTCACTTACCAAAGCCATGGTGATGATACTCTTGCAGTTTGGG 2035
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1975 AATGGGCTGGTGGCTTGTTCACTTACCAAAGCCATGGTGATGACACTCTTGCAGTTTGG- 2033
Query 2036 ATAGAGACATAGAGAACAAGGACATAGTTGTGTGGTACATAGAGAACAAGGACATAGTTG 2095
| ||||| | | | | ||| | |||||||||||||||| |||||||
Sbjct 2034 -TC-AGACA--G-G-----G-A--TAGA-G------ACATAGAGAACAAGGATATAGTTG 2073
Query 2096 TGTGGTACACACTTGGCTTCCATCACATTCCATGTCAAGAAGATTTTCCGATAATGCCCA 2155
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2074 TGTGGTATACACTTGGTTTCCATCACATTCCATGTCAAGAAGATTTTCCGATAATGCCCA 2133
Query 2156 CGGTTTCTTCGAGTTTCGATTTGAAGCCCGTTAATTTTTTCGAGCGCAATCCAATCCTTA 2215
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |
Sbjct 2134 CGGTTTCTTCGAGTTTCGATTTGAAGCCCGTAAACTTTTTCGAGCGCAATCCAATCCTCA 2193
Query 2216 GGGCCGCTCCAAACTTTGAACATGACCTCCCAGTTTGTGGAGTTCAATCTGTTTCTGCTT 2275
| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 2194 GTGCCGCTCCAAACTTTGAACATGATCTCCCGGTTTGTGGAGTTCAATCTGTTTCTGCTT 2253
Query 2276 GAGAAGAGTGGAGTACGAAATA 2297
||||||||| |||||||||||
Sbjct 2254 GAGAAGAGTAAAGTACGAAATA 2275
> AT4G12280.1 | Symbols: | copper amine oxidase family protein
| chr4:7301769-7302994 FORWARD LENGTH=903
Length=903
Score = 1062 bits (575), Expect = 0.0
Identities = 809/919 (88%), Gaps = 27/919 (3%)
Strand=Plus/Plus
Query 1362 ACCGATAAGGGAAGTGAGACCAAAAGTGACGCTAGTGGTACGAATGGCAGCTTCGGTAGG 1421
|||| ||||||||||||||||||| ||||| || ||||||||||||| |||||| || ||
Sbjct 9 ACCGTTAAGGGAAGTGAGACCAAAGGTGACACTTGTGGTACGAATGGTAGCTTCAGTGGG 68
Query 1422 TAACTATGATTACATCATTGATTACGAGTTCCAAACTGATGGGCTTATAAAAGCTAAGGT 1481
|||||| ||||||||||||||||| |||||||||||||||||| |||| | ||| |||||
Sbjct 69 TAACTACGATTACATCATTGATTATGAGTTCCAAACTGATGGGGTTATGAGAGCAAAGGT 128
Query 1482 TGGGCTCAGTGGAATACTAATGGTGAAAGGGACACCATATC-AAAACAAGAACCAAGTGG 1540
|||||| |||||||| | ||||||||||||||| | || | | |||||||||||||||
Sbjct 129 TGGGCTTAGTGGAATGTTGATGGTGAAAGGGACAACGTA-CGAGAACAAGAACCAAGTGA 187
Query 1541 AGAAAGATAAAGATGGTAATGAAGAAGAGCTTCACGGCACGCTTCTGTCTGAAAATGTAA 1600
||||||| ||||| |||||||||||||||||| | |||||| ||||||| ||||||||||
Sbjct 188 AGAAAGACAAAGAAGGTAATGAAGAAGAGCTTTATGGCACGATTCTGTCCGAAAATGTAA 247
Query 1601 TCGGAGTAATTCATGATCACTACGTCACTTTTTACCTTGATCTCGATGTCGATGGCCCGG 1660
| ||||| ||||| || ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 248 TTGGAGTTATTCACGACCACTACGTCACTTTTTACCTTGACCTCGATGTCGATGGCCCGG 307
Query 1661 ATAATTCATTTGTTAAAGTGAACCTCAAGAGGCAAGAGACTGAGCCAGGTGAGTCACCGA 1720
| ||||| |||||||||||||||||||||||||||||||| | ||||||||||||||| |
Sbjct 308 ACAATTCCTTTGTTAAAGTGAACCTCAAGAGGCAAGAGACGGCGCCAGGTGAGTCACCTA 367
Query 1721 GGAAAAGTTACCTGAAAGCTGTTAGGAACATTGCGAAAACCGAAAAAGATGGTCAGATCA 1780
||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||
Sbjct 368 GGAAAAGTTACATGAAAGCAGTTAGGAACATTGTGAAAACCGAAAAAGACGGTCAGATCA 427
Query 1781 AGCTAAGCTTGTATGATCCATCGGAATTCCACGTCATCAACT-CTGGTAAATCTACTCGG 1839
|||| |||||||| |||||||| |||| ||||||||| || | |||||||| | |||||
Sbjct 428 AGCTTAGCTTGTACGATCCATCAGAATACCACGTCATTAA-TCCTGGTAAAACAACTCGA 486
Query 1840 GTCGGAAACCCAACGGGTTATAAGGTCGTTCCAAGAACTACGGCAGCTAGTCTACTTGAC 1899
|| || ||||| |||||||| ||||| || || ||| | || ||||||||||||||||||
Sbjct 487 GTTGGTAACCCGACGGGTTACAAGGTTGTCCCTAGAGCCACAGCAGCTAGTCTACTTGAC 546
Query 1900 CATGATGATCCACCGCAGAAGAGAGGAGCTTTTACTAATAACCAAATTTGGGTTACTCCA 1959
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 547 CATGATGATCCACCGCAGAAGAGAGGAGCTTTTACTAATAACCAAATTTGGGTTACTCCC 606
Query 1960 TACAATAAGTCCGAGCAATGGGCTGGTGGCTTGTTCACTTACCAAAGCCATGGTGATGAT 2019
|||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||
Sbjct 607 TACAATAAGTCCGAGCAATGGGCTAGTGGTTTATTCACTTACCAAAGCCATGGTGATGAT 666
Query 2020 ACTCTTGCAGTTTGGGATAGAGACATAGAGAACAAGGACATAGTTGTGTGGTACATAGAG 2079
|||||||| |||||| | |||| |||| | | | ||| | | |||
Sbjct 667 ACTCTTGCGGTTTGG--TCC-GACA--GAGAT-A-G-AGATA-T--------A----GAG 705
Query 2080 AACAAGGACATAGTTGTGTGGTACACACTTGGCTTCCATCACATTCCATGTCAAGAAGAT 2139
|| |||||||| || ||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 706 AATAAGGACATTGTGGTGTGGTACACGCTTGGGTTCCATCACATTCCATGTCAAGAAGAT 765
Query 2140 TTTCCGATAATGCCCACGGTTTCTTCGAGTTTCGATTTGAAGCCCGTTAATTTTTTCGAG 2199
||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct 766 TTTCCGATAATGCCCACTGTTTCTTCAAGTTTCGATTTGAAGCCCGTAAATTTTTTCGAG 825
Query 2200 CGCAATCCAATCCTTAGGGCCGCTCCAAACTTTGAACATGACCTCCCAGTTTGTGGAGTT 2259
|||||||||||||||| ||||||||||||||||||| ||||||| || ||||| ||||
Sbjct 826 CGCAATCCAATCCTTAAGGCCGCTCCAAACTTTGAATATGACCTTCCGGTTTGCGGAGC- 884
Query 2260 CAA-TCTGTTTCTGCTTGA 2277
||| |||| ||||||||||
Sbjct 885 CAAATCTGATTCTGCTTGA 903
> AT4G12270.1 | Symbols: | Copper amine oxidase family protein
| chr4:7297808-7299930 FORWARD LENGTH=1383
Length=1383
Score = 918 bits (497), Expect = 0.0
Identities = 966/1185 (82%), Gaps = 62/1185 (5%)
Strand=Plus/Plus
Query 46 TTGATTT-TTCTCAT-AGTCACAGCTGGTTTCATTATCTCTT-TT-ACTTCCACTTACTT 101
||| ||| ||||||| | ||| ||| |||||| | ||||| || ||||||||| ||||
Sbjct 25 TTG-TTTCTTCTCATCA-CCACGGCTTGTTTCA-T-CCTCTTATTCACTTCCACTAACTT 80
Query 102 CTCTCACGCGACGTCGTCTACGACGGGGATTCTT-GATTGCACCGACTCTTCTTCTTCAC 160
|||||| ||| | || || ||| || | || || || ||||| | ||||| |||||||
Sbjct 81 CTCTCAAGCGCCATCATCCACGGCGAAGCTT-TTCGACTGCACAAAATCTTCGTCTTCAC 139
Query 161 CTCTTTGCGCTTCTAGAAACTTTCT-TTTCAACAAACAACAACCACGTCCCATTCCTAAA 219
|| |||| || || |||||||| || ||| |||||| ||| | | || |||||| |||||
Sbjct 140 CTTTTTGTGCGTCAAGAAACTTCCTCTTT-AACAAA-AAC-A-CTCGGCCCATTTCTAAA 195
Query 220 CACGA-TCCTAAACCAAAAACCAAAAACCATGATCACGTCTCCGATACACCAAACCATCC 278
|| | ||| ||| ||||| ||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct 196 AAC-ATTCCCAAAACAAAACCCAAAAACCATGACCACGTTTCCGATACACCGAACCACCC 254
Query 279 TCTAGACCCACTCACGGTGGTGGAGATTAACAAAGTCCGATCAATACTCAACTCTCACGC 338
||| |||||||| || || ||||||| ||||||||||||||||| ||| ||| |||||
Sbjct 255 TCTTGACCCACTTACCGTCATGGAGATCAACAAAGTCCGATCAATCCTCTCCTCCCACGC 314
Query 339 GCTATTCACCTC-CG-GTACACCACACGCGCTCCACACCGTCGTTCTTGAAGAGCCTGAC 396
||| ||| |||| || |||| || ||| ||| || ||||||||||||||||||| |||
Sbjct 315 GCTCTTCGCCTCACGTGTAC-CC-CACTTGCTTAACTCCGTCGTTCTTGAAGAGCCAGAC 372
Query 397 AAGAATCTTGTCCGTCACTGGGAAAAAGGTA-ACCCACTTCCTCCGAGGAAA-GCTTCCG 454
|||||||| ||| | || ||||| ||||| | ||| ||| || || | |||| || || |
Sbjct 373 AAGAATCTAGTCAGACAATGGGAGAAAGG-AGACCAACTACCACC-AAGAAAGGCCTCAG 430
Query 455 TCATCGCACGTGTTGGCCTCAACACGCACGTGCTCACCGTTGA-TATCTCTACGGGTCGG 513
| ||||||||||||||| |||| ||||| |||||| |||||| | | ||||| ||||
Sbjct 431 TGATCGCACGTGTTGGCGGCAACTCGCACTTGCTCATCGTTGACT-TATCTACAAGTCGT 489
Query 514 GTAGATTC-AGAGAATAGCCCGGTTAGTGTTTCGGGTTACCCGA-TGATGACTATC-GAG 570
|| || || || | |||| |||||| || || |||||||||| || |||| || |||
Sbjct 490 GTTGA-TCAAGCGGATAGTCCGGTTCCTGAATCCGGTTACCCGATTG-TGAC-GTCGGAG 546
Query 571 GAGATGAACGCTA-TGAC-TGT-TGCACCGTTCGCAAACGCAGATTTCAACCGTACGATC 627
|||||| | | | || | || |||||||||| ||||||||||||||||||||||||||
Sbjct 547 GAGATGGA--C-AGTGCCGCGTCTGCACCGTTCTCAAACGCAGATTTCAACCGTACGATC 603
Query 628 ATCTCTCGTGGAATTAATCTAACGGACGTGATTTGTTTCCCAATCTCTTGTGGTTGGTTT 687
| |||||||||| ||||||||||||||||||||||| ||||||||||| |||| ||||||
Sbjct 604 AACTCTCGTGGAGTTAATCTAACGGACGTGATTTGTATCCCAATCTCTAGTGGCTGGTTT 663
Query 688 GGTAATAAAGAAGA-AA-A-CGCGAGGGTTATTAAAAGTCAGTGTTTCTTGACACAAGGA 744
||||||||||| || || | | ||||||| ||||| ||||||||||| || ||| ||
Sbjct 664 GGTAATAAAGACGACAACACCAAAAGGGTTACTAAAATTCAGTGTTTCTCAACTCAA-GA 722
Query 745 -ACACCTAACTTCTACATGCGTCCTATCGAAGGTTTAAC-CATCCTTGTCGATTTAGATA 802
|| ||||| ||||||||||| |||||||||||||| || | | ||| | |||||||| |
Sbjct 723 TACCCCTAATTTCTACATGCGACCTATCGAAGGTTTGACTC-TGCTTTTTGATTTAGACA 781
Query 803 CAAAGC-AAGTGA-TCGAGATATCCGATACGGGTCGGGCTATACCCATACCCGGTTCAAC 860
| |||| || | | | |||||| | ||||| |||| | ||||||||||||||||||||
Sbjct 782 CGAAGCGAA-T-ACTTGAGATAACAGATACCGGTCAATCAATACCCATACCCGGTTCAAC 839
Query 861 CAATACCGATTACCG--CTTCGAAAAAC-TCGTGACCACCGACAAAAGCC-GACTTCTCA 916
||||||||||| || ||| | | || |||| ||||||| || ||| ||||
Sbjct 840 TAATACCGATTATCGATATTC--TACTCTTCCAAACCA-TGACAAAA-CCAGACCCCTCA 895
Query 917 ACCCCATATCCA-TCGAGCAGCCACGTGGTCCAAGCTTCGTAATCGAAGACAACCATCTA 975
| | |||| || |||||||||||||||| ||||||||||| |||||||| |||||| ||
Sbjct 896 ATACAATAT-CACTCGAGCAGCCACGTGGACCAAGCTTCGTTATCGAAGATAACCATTTA 954
Query 976 GTGAAATGGGCAAATTGGGAATTTCATCTAAAACCCGACCCGAGAGCAGGTGTGGTTATA 1035
|| |||||||||||||||||||||||| ||||||| ||||||||||| ||| || ||||
Sbjct 955 GTAAAATGGGCAAATTGGGAATTTCATTTAAAACCAGACCCGAGAGCCGGTCTGATTATG 1014
Query 1036 TCACTGGTCAGAGTACACGACCCGGATACTCAAGAGACACGTGACGTGATGTACAAAGGG 1095
|| | ||||| | |||||||||||||||| ||||| |||||||| |||||||||||| ||
Sbjct 1015 TCCCAGGTCAAAATACACGACCCGGATACACAAGAAACACGTGAAGTGATGTACAAA-GG 1073
Query 1096 TTT-GTGTCGGAGCTTTTTGTTCCGTACATGGATCCATCGGACGCGTGGTACTTCAAGAC 1154
||| |||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct 1074 TTTCGTGTCGGAGCTTTTTGTTCCGTACATGGATCCATCGGAAGCTTGGTACTTTAAGAC 1133
Query 1155 TTACATGGACGCAGGGGAATACGGGTTCGGGTTACAAGCCATGCC 1199
||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1134 TTACATGGACGCAGGAGAGTACGGGTTCGGGTTACAAGCCATGCC 1178
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 114005437695
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5