BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg943269 Length=1508 Score E Sequences producing significant alignments: (Bits) Value AT4G04950.1 | Symbols: | thioredoxin family protein | chr4:251... 2431 0.0 AT4G32580.1 | Symbols: | Thioredoxin superfamily protein | chr... 630 9e-180 > AT4G04950.1 | Symbols: | thioredoxin family protein | chr4:2517666-2519977 REVERSE LENGTH=1736 Length=1736 Score = 2431 bits (1316), Expect = 0.0 Identities = 1432/1488 (96%), Gaps = 7/1488 (0%) Strand=Plus/Plus Query 14 CCTCTTCGAAGATGA-CTGGTACGGTGAAGGATATCGTTTCAAAGGCAGAGCTTGATAAC 72 ||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||| Sbjct 43 CCTCTTCGAAGATGAGC-GGTACGGTGAAGGATATCGTTTCAAAGGCGGAGCTTGATAAC 101 Query 73 TTGCGCCAGAGCGGCGCACCAATCGTGCTTCACTTCTGGGCTTCTTGGTGTGACGCTTCG 132 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| Sbjct 102 TTGCGCCAGAGCGGCGCACCAGTCGTGCTTCACTTCTGGGCTTCTTGGTGTGATGCTTCG 161 Query 133 AAGCAGATGGATCAAGTTTTCTCTCATCTCGCTACTGATTTCCCTCGTGCTCACTTCTTT 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 162 AAGCAGATGGATCAAGTTTTCTCTCATCTCGCTACTGATTTCCCTCGTGCTCACTTCTTT 221 Query 193 AGGGTAGAAGCTGAGGAACATCCTGAGATATCTGAGGCTTACTCTGTTGCTGCTGTGCCT 252 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 222 AGGGTTGAAGCTGAGGAACATCCTGAGATATCTGAGGCTTACTCTGTTGCTGCTGTGCCT 281 Query 253 TATTTCGTCTTCTTCAAGGATGGCAAAACTGTGGATACACTTGAGGGTGCAGATCCATCA 312 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 282 TATTTCGTCTTCTTCAAGGATGGTAAAACTGTGGATACACTTGAGGGTGCAGATCCATCA 341 Query 313 AGTTTAGCTAATAAGGTAGGCAAAGTTGCTGGTTCTAGTACCTCTGCGGAGCCTGCTGCT 372 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 342 AGTTTAGCTAATAAGGTTGGCAAAGTTGCTGGTTCTAGTACTTCTGCGGAGCCTGCTGCT 401 Query 373 CCTGCAAGCTTAGGGTTGGCTGCAGGGCCAACGATTCTTGAAACTGTGAAGGAGAATGCG 432 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 402 CCTGCAAGCTTAGGGTTGGCTGCTGGGCCAACGATTCTTGAAACTGTGAAGGAGAATGCG 461 Query 433 AAAGCTACTGTACAAGACCGAGCT---CCTGTATCTACCGCTGATGGTCTCAAGAGCCGT 489 |||||| || |||||||||||||| |||||||||||||| |||| ||||||||||||| Sbjct 462 AAAGCTTCTTTACAAGACCGAGCTCAGCCTGTATCTACCGCCGATGCTCTCAAGAGCCGT 521 Query 490 TTCGAAAAACTCACTAATTCTCAACCTGTCATGTTATTCATGAAAGGTAATCCTGAGGAG 549 || ||||| |||||||||||||| ||||||||||||||||||||||||| |||||| ||| Sbjct 522 TTGGAAAAGCTCACTAATTCTCACCCTGTCATGTTATTCATGAAAGGTATTCCTGAAGAG 581 Query 550 CCTAGGTGTGGGTTTAGCAGGAAAGTAGTTGACATTTTGAAAGAGGAGAAGGTTGATTTT 609 |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 582 CCTAGGTGTGGGTTTAGCAGGAAAGTAGTTGACATTTTGAAAGAGGTTAACGTTGATTTT 641 Query 610 GGAAGTTTTGACATACTATCGGACAACGAAGTGCGAGAGGGTTTGAAGAAATTCTCTAAC 669 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 642 GGAAGTTTTGACATACTATCGGATAACGAAGTGCGAGAGGGTTTGAAGAAATTCTCTAAC 701 Query 670 TGGCCAACGTTTCCTCAGCTGTACTGCAACGGAGAGCTTCTTGGTGGAGCTGATATCGCA 729 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 702 TGGCCAACGTTTCCTCAGCTGTACTGCAACGGAGAGCTTCTTGGTGGAGCTGATATCGCA 761 Query 730 ATAGCGATGCACGAGAGCGGTGAACTAAAAGATGCTTTCAAAGATCTTGGGATCATTACA 789 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 762 ATAGCGATGCACGAGAGCGGTGAACTAAAAGATGCTTTCAAAGATCTTGGGATCACGACA 821 Query 790 GTTGGTTCAAAAGAAAGTCAGGATGAAGCTGGAAAAGGAGGAGGGGTAAGTTCAGGCAAC 849 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 822 GTTGGTTCAAAAGAAAGTCAGGATGAAGCTGGAAAAGGAGGAGGGGTTAGTTCAGGAAAC 881 Query 850 ACAGGCTTAAGCGAGACCCTCCGAGCTCGGCTCGAAGGTCTGGTCAATTCGAAACCAGTT 909 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 882 ACAGGCTTAAGTGAGACCCTCCGAGCTCGGCTCGAAGGTCTGGTCAATTCCAAACCAGTT 941 Query 910 ATGCTGTTCATGAAAGGGAA-ACCAGAAGAACCAAAGTGTGGGTTTAGTGGGAAAGTGGT 968 ||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||| Sbjct 942 ATGCTGTTCATGAAAGG-AAGACCAGAAGAACCAAAGTGTGGGTTCAGTGGGAAAGTGGT 1000 Query 969 TGAAATTCTCAACCAAGAAAAAATCGAGTTTGGGAGTTTTGATATACTCTTAGATGATGA 1028 |||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| || Sbjct 1001 TGAAATCCTCAACCAAGAAAAAATCGAGTTTGGGAGTTTCGATATCCTCTTAGATGACGA 1060 Query 1029 AGTTCGTCAAGGGCTTAAAGTGTATTCAAACTGGTCAAGCTATCCTCAGCTTTACGTGAA 1088 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1061 AGTTCGCCAAGGCCTTAAAGTGTATTCAAACTGGTCAAGCTATCCTCAGCTTTACGTGAA 1120 Query 1089 AGGCGAGCTTATGGGTGGATCAGACATTGTCTTGGAGATGCAAAAGAGCGGTGAGCTGAA 1148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1121 AGGCGAGCTTATGGGTGGATCAGACATTGTCTTGGAGATGCAAAAGAGCGGTGAGCTGAA 1180 Query 1149 AAAGGTTTTGTCCGAGAAAGGAATAACCGGAGAACAGAGTCTTGAAGATAGATTGAAGGC 1208 |||||| ||| |||||||||| || || |||||||||||||||||||||||||||||||| Sbjct 1181 AAAGGTCTTGACCGAGAAAGGGATCACTGGAGAACAGAGTCTTGAAGATAGATTGAAGGC 1240 Query 1209 GTTGATCAACTCCTCGGAAGTAATGCTTTTCATGAAAGGTTCACCAGATGAACCGAAATG 1268 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1241 ACTGATCAATTCCTCGGAAGTAATGCTATTCATGAAAGGTTCACCAGATGAACCGAAATG 1300 Query 1269 CGGATTTAGCTCCAAAGTTGTGAAAGCACTGAGAGGAGAAAACGTGAGTTTCGGATCGTT 1328 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1301 CGGATTTAGCTCCAAAGTTGTGAAAGCATTGAGAGGAGAAAACGTGAGTTTCGGATCGTT 1360 Query 1329 TGATATCTTGACCGATGAAGAAGTAAGGCAAGGGATTAAGAATTTCTCAAACTGGCCAAC 1388 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1361 TGATATCTTGACTGATGAAGAAGTAAGGCAAGGGATTAAGAATTTCTCAAACTGGCCAAC 1420 Query 1389 ATTTCCTCAGCTTTACTATAAAGGTGAGTTAATTGGAGGATGTGATATCATTATGGAGCT 1448 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1421 TTTTCCTCAGCTATACTACAAAGGTGAGTTAATTGGAGGATGTGATATCATTATGGAGCT 1480 Query 1449 AAGTGAGAGTGGTGATCTCAAAGCAACTCTATCTGAGTAAGTAATATA 1496 ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1481 AAGTGAGAGTGGTGATCTCAAAGCAACTCTATCCGAGTAAGTAATATA 1528 > AT4G32580.1 | Symbols: | Thioredoxin superfamily protein | chr4:15719847-15720535 REVERSE LENGTH=514 Length=514 Score = 630 bits (341), Expect = 9e-180 Identities = 476/534 (89%), Gaps = 37/534 (7%) Strand=Plus/Plus Query 25 ATGACTGGTACGGTGAAGGATATCGTTTCAAAGGCA-GAGCTTGATAACTTGCGCCAGAG 83 |||| |||||| |||||||||||||||||||||| | |||||||||||||||||||| || Sbjct 1 ATGAGTGGTACTGTGAAGGATATCGTTTCAAAGG-AGGAGCTTGATAACTTGCGCCACAG 59 Query 84 CGGCGCACCAATCGTGCTTCACTTCTGGGCTTCTTGGTGTGACGCTTCGAAGCAGATGGA 143 ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 60 CGGAGCACCACTCGTGCTTCACTTCTGGGCTTCTTGGTGTGACGCTTCGAAGCAGATGGA 119 Query 144 TCAAGTTTTCTCTCATCTCGCTACTGATTTCCCTCGTGCTCACTTCTTTAGGGTAGAAGC 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 TCAAGTTTTCTCTCATCTCGCTACTGATTTCCCTCGTGCTCACTTCTTTAGGGTAGAAGC 179 Query 204 TGAGGAACATCCTGAGATATCTGAGGCTTACTCTGTTGCTGCT-GTGCCTTATTTCGTCT 262 |||||||||||||||||||||||||||||| ||||||||| || ||||| |||||||||| Sbjct 180 TGAGGAACATCCTGAGATATCTGAGGCTTATTCTGTTGCT-CTTGTGCCGTATTTCGTCT 238 Query 263 TCTTCAAGGATGGCAAAACTGTGGATACACTTGA-GGGTGCAGATCCATCAAGTTTAGCT 321 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 239 TCTTCAAGGATGGCAAAACTGTGGATACACTTGAAGGG-GCAGATCCATCAAGTTTAGCT 297 Query 322 AATAAGGTAGGCAAAGTTGCTGGTTCTAGTACCTCTGCGGAGCCTGCTGCTCCTGCAAGC 381 ||||| || ||||||||||||||||||| | | | | | | || |||||| Sbjct 298 AATAAAGTTGGCAAAGTTGCTGGTTCTA-T---T------A-C-T-C--CT---GCAAGC 339 Query 382 TTAGGGTTGGCTGCAGGGCCAACGATTCTTGAAACTGTGAAGGAGAATGCGAAAGCTACT 441 |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || Sbjct 340 TTAGGGTTGGCTGCAGGGCCAACGATTCTTGAAACTGTTAAGAAGAATGCGAAAGCTTCT 399 Query 442 GTACAAGACCGAGCTC--C-TGTATCTACCGCTGATGGTCTCAAGAGCCGTTTCGAAAAA 498 | |||||||||||||| | ||||||||||||||||| |||||||| ||||| |||||| Sbjct 400 GGACAAGACCGAGCTCAGCCTGTATCTACCGCTGATGCTCTCAAGAATCGTTTGGAAAAA 459 Query 499 CTCACTAATTCTCAACCTGTCATGTTATTCATGAAAGGTAATCCTGAGGAGCCT 552 ||||| | | ||| |||||||||||||| |||| |||||| |||||| Sbjct 460 CTCAC-----C-C----TGTTATGTTATTCATGAATGGTACTCCTGAAGAGCCT 503 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 74397207690 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5