BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg943283

Length=1793
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G05020.2 | Symbols: NDB2 | NAD(P)H dehydrogenase B2 | chr4:2...  2579    0.0  
  AT4G21490.1 | Symbols: NDB3 | NAD(P)H dehydrogenase B3 | chr4:1...  1777    0.0  


> AT4G05020.2 | Symbols: NDB2 | NAD(P)H dehydrogenase B2 | chr4:2572621-2576595 
FORWARD LENGTH=2364
Length=2364

 Score = 2579 bits (1396),  Expect = 0.0
 Identities = 1511/1567 (96%), Gaps = 6/1567 (0%)
 Strand=Plus/Plus

Query  1     TTGAATCGAACC-AGAGCGAAAATGAGAAATTTCAGTATCTTCGAGAGATTCTCTAAAGC  59
             |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct  110   TTGAATCGAACCAAGAGCGAAAATGAGAAATTTCAGTGTCTTCGAGAGATTCTCTAAAGC  169

Query  60    TTTTCAAGATCATCCTTCTCTCACCAGGATTCTCGTCGTCTCCACGATCAGTGGTGGTGG  119
             |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  170   TTTTAAAGATCATCCTTCTCTCACCAGGATTCTCGTCGTCTCCACGATCAGTGGTGGTGG  229

Query  120   ACTTATAGCTTATTCTGAGGCAAACGCATCCTATGGAGCGAACGGTGCTGGTATTGTTGA  179
             ||||||||| |||||||||||||||||||| |||||||| || |||| || | |||||||
Sbjct  230   ACTTATAGCGTATTCTGAGGCAAACGCATCTTATGGAGCAAATGGTGGTGCTGTTGTTGA  289

Query  180   AACTGGAACCAAGAAGAAGAAGGTGGTGTTGCTCGGAACTGGATGGGCTGGAACTAGTTT  239
             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct  290   AACTGGAACCAAGAAGAAGAAGGTGGTGCTGCTCGGAACTGGATGGGCTGGAACTAGTTT  349

Query  240   CTTGAAGAATTTGAATAATTCTCAATATGAGGTTCAGATTATATCACCTCGAAACTACTT  299
             ||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct  350   CTTGAAGAATTTGAACAATTCTCAATATGAGGTTCAGATTATATCGCCTCGGAACTACTT  409

Query  300   TGCTTTCACTCCCTTGTTACCTAGTGTTACTTGTGGAACTGTTGAAGCTCGCAGCGTTGT  359
             |||||||||||| ||  |||||||||||||||||||||||||||||||||| || |||||
Sbjct  410   TGCTTTCACTCCTTTACTACCTAGTGTTACTTGTGGAACTGTTGAAGCTCGTAGTGTTGT  469

Query  360   TGAGCCTATTCGAAACATTGGAAGAAAGAAGAATGTTGATACTTCTTACCTGGAGGCAGA  419
             ||||||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||
Sbjct  470   TGAGCCTATTCGAAACATTGGAAG--A-AAGAATGTTGATACTTCTTACTTGGAGGCAGA  526

Query  420   ATGTTTCAAAATTGATCCAGCAAGCAAGAAAGTTTACTGCCGATCCAAACAAGGCCTTAG  479
             ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct  527   ATGTTTCAAAATTGATCCAGCTAGCAAGAAGGTTTACTGCCGATCCAAACAAGGCCTTAG  586

Query  480   TTCAAATGGAAA-AAAGGAATTTTCTGTTGACTATGACTATCTTGTAATTGCAACTGGAG  538
             |||||||||||| ||| ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct  587   TTCAAATGGAAAGAAA-GAATTTTCTGTTGACTATGACTACCTTGTAATTGCTACTGGAG  645

Query  539   CTCAGTCTAACACCTTTAACATACCCGGAGTGGAGGAAAACTGTCATTTTCTGAAAGAGG  598
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct  646   CTCAGTCTAACACCTTTAACATACCCGGAGTGGAGGAGAACTGTCATTTTCTGAAAGAGG  705

Query  599   TTGAAGATGCTCAGAGAATCCGTAAAACTGTGATTGATTCCTTTGAGAAGGCAAGTCTAC  658
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  706   TTGAAGATGCTCAGAGAATCCGTAAAACTGTAATTGATTCCTTTGAGAAGGCAAGTCTAC  765

Query  659   CAGAACTAAGCGATGAAGAGCGAAAGAGAATCCTGCATTTTGTGGTTGTTGGTGGTGGGC  718
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct  766   CAGAACTAAGCGATGAAGAGAGAAAGAGAATCCTGCATTTTGTGGTTGTTGGTGGTGGGC  825

Query  719   CAACAGGTGTTGAGTTTGCCGCTGAGCTGCATGATTTTGTTACTGAGGATCTAGTCAGTC  778
             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct  826   CAACAGGTGTTGAGTTTGCCGCTGAGCTACATGATTTTGTTACTGAGGATCTAGTCAGTC  885

Query  779   TTTATCCTAGAGCCAAGGGTTCAGTACGAATCACACTTCTCGAGGCCGCAGACCACATCC  838
             | ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct  886   TCTATCCTAGAGCCAAGGGTTCAGTGCGAATCACGCTTCTGGAGGCCGCAGACCACATCC  945

Query  839   TGACCATGTTTGACAAGAGAATCACTGAGTTTGCCGAAGAAAAGTTTAGCAGAGATGGAA  898
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  946   TGACCATGTTTGACAAGAGAATCACTGAGTTTGCCGAAGAAAAGTTTAGCAGAGATGGAA  1005

Query  899   TTGATGTGAAACTTGGCTCTATGGTAACTAAAGTGAATGAGAAAGATATATCTGCTAAAA  958
             ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct  1006  TTGATGTGAAACTTGGCTCGATGGTAACTAAAGTGAATGAGAAAGATATATCTGCTAAAA  1065

Query  959   CGAAAGGAGGAGAGGTTTCCTCTATTCCTTATGGAATGATTGTCTGGTCAACTGGTATTG  1018
             | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct  1066  CCAAAGGAGGAGAGGTTTCCTCGATTCCTTATGGAATGATTGTCTGGTCAACTGGTATTG  1125

Query  1019  GAACTCGTCCTGTGATAAAAGATTTTATGAAACAAATTGGTCAGGGTAATAGACGTGCTC  1078
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct  1126  GAACTCGTCCTGTGATAAAAGATTTTATGAAACAAATTGGTCAGGGTAATAGACGAGCTC  1185

Query  1079  TGGCAACTGATGAATGGCTTCGCGTAGAAGGAACTGATAATATATATGCCCTTGGTGATT  1138
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1186  TGGCAACTGATGAATGGCTTCGCGTAGAAGGAACTGATAATATATATGCCCTTGGTGATT  1245

Query  1139  GTGCAACCATTAACCAGCGCAAAGTCATGGAAGATGTTTCTGCTATTTTTAGCAAAGCAG  1198
             | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1246  GCGCAACCATTAACCAGCGCAAAGTCATGGAAGATGTTTCTGCTATTTTTAGCAAAGCAG  1305

Query  1199  ACAAAGACAAGTCTGGGACACTGACTCTCAAAGAGTTCCAAGAAGCAATGGATGACATTT  1258
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1306  ACAAAGACAAGTCTGGGACACTGACTCTCAAAGAGTTCCAAGAAGCAATGGATGACATTT  1365

Query  1259  GTGTTAGATACCCTCAAGTTGAGCTCTACTTGAAGAGTAAACGTATGCGTGGCATTGCAG  1318
             ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct  1366  GTGTTAGATACCCTCAAGTGGAGCTCTACTTGAAGAGTAAACGTATGCGTGGCATTGCAG  1425

Query  1319  ATCTTCTTAAAGAAGCCGAAACTGATGATGTATCCAAGAAGAACATCGAACTGAAGATCG  1378
             |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||
Sbjct  1426  ATCTTCTTAAAGAAGCCGAAACTGATGATGTATCTAAGAATAACATTGAACTGAAGATCG  1485

Query  1379  AAGAATTCAAATCAGCTCTTTCTCAGGTTGACTCACAAGTGAAGTTTCTTCCAGCTACAG  1438
             |||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct  1486  AAGAGTTCAAATCGGCTCTATCTCAGGTTGACTCACAAGTGAAGTTTCTTCCAGCTACTG  1545

Query  1439  CACAGGTTGCTGCGCAGCAAGGTGCTTACCTAGCTAAATGCTTTGATCGCATGGAAGATT  1498
             |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |
Sbjct  1546  CACAGGTTGCTGCGCAGCAAGGTGCTTACCTAGCTAAATGCTTTGACCGTATGGAAGAGT  1605

Query  1499  GCGAGAAGAATCCAGAAGGTCCCATTAGGATGAGAGGAGAAGGTCGTCATCGTTTCCGCC  1558
             | ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct  1606  GTGAGAAGAGTCCAGAAGGTCCCATTAGGATGAGAGGAGAAGGTCGTCACCGTTTCCGCC  1665

Query  1559  CCTTCAG  1565
             |||||||
Sbjct  1666  CCTTCAG  1672


 Score =  363 bits (196),  Expect = 5e-99
 Identities = 208/214 (97%), Gaps = 0/214 (0%)
 Strand=Plus/Plus

Query  1564  AGGTACAGACATTTGGGACAATTTGCACCACTGGGAGGGGAGCAAACGGCAGCACAACTT  1623
             ||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1782  AGGTATAGGCATCTGGGACAATTTGCACCACTGGGAGGGGAGCAAACGGCAGCACAACTT  1841

Query  1624  CCAGGAGATTGGGTTTCTATTGGACAAAGCAGCCAGTGGCTCTGGTATTCCGTCTACGCC  1683
             |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct  1842  CCAGGAGATTGGGTTTCTATTGGACACAGCAGCCAGTGGCTCTGGTACTCCGTCTACGCC  1901

Query  1684  AGTAAGCAAGTGAGCTGGCGTACGAGAGTGCTTGTGGTTTCAGATTGGATGAGGCGTTTC  1743
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1902  AGTAAGCAAGTGAGCTGGCGTACGAGAGTGCTTGTGGTTTCAGATTGGATGAGGCGTTTC  1961

Query  1744  ATCTTTGGTAGGGATTCCAGTAGCATCTGATTTT  1777
             ||||||||||| ||||||||||||||||||||||
Sbjct  1962  ATCTTTGGTAGAGATTCCAGTAGCATCTGATTTT  1995


> AT4G21490.1 | Symbols: NDB3 | NAD(P)H dehydrogenase B3 | chr4:11436495-11439326 
REVERSE LENGTH=1743
Length=1743

 Score = 1777 bits (962),  Expect = 0.0
 Identities = 1500/1756 (85%), Gaps = 51/1756 (3%)
 Strand=Plus/Plus

Query  39    CTTCGAGAGATTCTCTAAAGCTTTTCAAGATCATCCTTCTCTCACCAGGATTCTCGTCGT  98
             |||||| ||||| ||  ||||||| || ||| ||||||||||| |||  |||||||||||
Sbjct  18    CTTCGAAAGATTATCCCAAGCTTTCCATGATTATCCTTCTCTCTCCAAAATTCTCGTCGT  77

Query  99    CTCCACGATCAGTGGTGGTGGACTTATAGCTTATTCTGAGGCAAA-CGCATCCTATGGAG  157
             |||||| ||||||||||| |||||||||| ||| ||||||||||| | |||| |||  ||
Sbjct  78    CTCCACCATCAGTGGTGGGGGACTTATAGTTTACTCTGAGGCAAATC-CATCATAT--AG  134

Query  158   CGAACGGTGCTGGTATTGTTGAAACTGGAACCAAGAAGAAG-AAGGTGGTGTTGCTCGGA  216
             | |||     |||   ||||||||||  ||||| |||| || || || ||| ||||||||
Sbjct  135   C-AAC---AATGG---TGTTGAAACTAAAACCAGGAAG-AGAAAAGTAGTGCTGCTCGGA  186

Query  217   ACTGGATGGGCTGGAACTAGTTTCTTGAAGAATTTGAATAATTC-TCAATATGAGGTTCA  275
             ||||||||||||||| | ||||| ||||||| ||||||||| || ||  |||||||||||
Sbjct  187   ACTGGATGGGCTGGAGCAAGTTTTTTGAAGACTTTGAATAACTCTTC-TTATGAGGTTCA  245

Query  276   GATTATATCACCTCGAAACTACTTTGCTTTCACTCCCTTGTTACCTAGTGTTACTTGTGG  335
             | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  246   GGTTATATCTCCTCGAAACTACTTTGCTTTCACTCCCTTGTTACCTAGTGTTACTTGTGG  305

Query  336   AACTGTTGAAGCTCGCAGCGTTGTTGAGCCTATTCGAAACATTGGAAGAAAGAAGAATGT  395
             ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||||
Sbjct  306   AACTGTTGAAGCTCGCAGCGTTGTTGAACCTATTCGCAACATTGCAAGAAAGCAGAATGT  365

Query  396   TGATACT-TCTTACCTGGAGGCAGAATGTTTCAAAATTGATCCAGCAAGCAAGAAAGTTT  454
             ||| | | |||| | |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct  366   TGAGA-TGTCTTTCTTGGAGGCAGAATGTTTCAAAATTGATCCAGGAAGCAAGAAAGTTT  424

Query  455   ACTGCCGATCCAAACAAGGCCTTAGTTC-AAATGGAAAAAAGGAATTTTCTGTTGACTAT  513
             |||||||||| ||||||||| | | ||| ||| |||| |||| | |||  ||||||||||
Sbjct  425   ACTGCCGATCAAAACAAGGCGTGAATTCGAAAGGGAAGAAAG-AGTTTGATGTTGACTAT  483

Query  514   GACTATCTTGTAATTGCAACTGGAGCTCAGTCTAACACCTTTAACATACCCGGAGTGGAG  573
             ||||| |||||||| || |||||||||||||||||||| |||||||| || || ||||||
Sbjct  484   GACTACCTTGTAATCGCTACTGGAGCTCAGTCTAACACATTTAACATTCCTGGCGTGGAG  543

Query  574   GAAAACTGTCATTTTCTGAAAGAGGTTGAAGATGCTCAGAGAATCCGTAAAACTGTGATT  633
             || ||||||||||| || ||||||||||||||||| |||||||| ||||  ||||| |||
Sbjct  544   GAGAACTGTCATTTCCTCAAAGAGGTTGAAGATGCACAGAGAATTCGTAGTACTGTCATT  603

Query  634   GATTCCTTTGAGAAGGCAAGTCTACCAGAACTAAGCGATGAAGAGCGAAAGAGAATCCTG  693
             ||||| ||||||||||||||| |||| | ||||| |||  ||||| |||||||||| || 
Sbjct  604   GATTCATTTGAGAAGGCAAGTTTACCTGGACTAAACGAACAAGAGAGAAAGAGAATGCTA  663

Query  694   CATTTTGTGGTTGTTGGTGGTGGGCCAACAGGTGTTGAGTTTGCCGCTGAGCTGCATGAT  753
             |||||||| |||||||||||||| ||||||||||||||||||||  ||||||| ||||||
Sbjct  664   CATTTTGTAGTTGTTGGTGGTGGACCAACAGGTGTTGAGTTTGCTTCTGAGCTTCATGAT  723

Query  754   TTTGTTA-CTGAGGATCTAGTCAGTCTTTATCCTAGAGCCAAGGG-TTCAGTAC-GAATC  810
             ||||||| | |||||||||||||  || ||||||| ||||||    || ||| | || ||
Sbjct  724   TTTGTTAAC-GAGGATCTAGTCAAACTATATCCTAAAGCCAAAAACTT-AGTGCAGA-TC  780

Query  811   ACACTTCTCGAGGCCGCAGACCACATCCTGACCATGTTTGACAAGAGAATCACTGAGTTT  870
             || ||||| ||||| |||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct  781   ACTCTTCTAGAGGCTGCAGACCACATCTTGACCATGTTTGACAAGAGAATCACAGAGTTT  840

Query  871   GCCGAAGAAAAGTTTAGC-AGAGATGGAATTGATGTGAAACTT-GGCTCTATGGTAA-CT  927
             || |||||||| |||| | |||||||| |||||||||||| || || ||||||||   | 
Sbjct  841   GCTGAAGAAAAATTTA-CTAGAGATGGTATTGATGTGAAA-TTAGGTTCTATGGTGGTC-  897

Query  928   AAAGTGAATGAGAAAGATATATCTGCTAAAACGAAAGGAGGAGAGGTTTCCTCTATTCCT  987
             ||||||||||| || || || ||||| ||||| |||| ||||||||| ||  ||||||||
Sbjct  898   AAAGTGAATGATAAGGAAATTTCTGCAAAAACCAAAGCAGGAGAGGTCTCAACTATTCCT  957

Query  988   TATGGAATGATTGTCTGGTCAACTGGTATTGGAACTCGTCCTGTGATAAAAGATTTTATG  1047
             |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct  958   TATGGAATGATTGTTTGGTCAACTGGTATTGGGACTCGTCCTGTGATCAAAGATTTTATG  1017

Query  1048  AAACAAATTGGTCAGGGTAATAGACGTGCTCTGGCAACTGATGAATGGCTTCGCGTAGAA  1107
             ||||||||||||||||| |||||||||||| | ||||| |||||||||||||| || |||
Sbjct  1018  AAACAAATTGGTCAGGGCAATAGACGTGCTTTAGCAACCGATGAATGGCTTCGTGTTGAA  1077

Query  1108  GGAACTGATAATATATATGCCCTTGGTGATTGTGCAACCATTAACCAGCGCAAAGTCATG  1167
             |||  ||||||||||||||| ||||||||||||||||| || |||||| | |||||||||
Sbjct  1078  GGATGTGATAATATATATGCACTTGGTGATTGTGCAACAATCAACCAGAGAAAAGTCATG  1137

Query  1168  GAAGATGTTTCTGCTATTTTTA-GCAAAGCAGACAAAGACAAGTCTGGGACACTGACTCT  1226
             |||||  |  ||||||| || | | |||||||| || || || || || ||||||||  |
Sbjct  1138  GAAGACATAGCTGCTATATTCAAG-AAAGCAGATAAGGAAAATTCAGGAACACTGACAAT  1196

Query  1227  CAAAGAGTTCCAAGAAGCAATG-GATGACATTTGTGTTAGATACCCTCAAGTTGAGCTCT  1285
              ||||| || || |||| |||| | |||||| |||| ||||||||||||||| |||||||
Sbjct  1197  GAAAGAATTTCATGAAGTAATGAG-TGACATATGTGATAGATACCCTCAAGTGGAGCTCT  1255

Query  1286  ACTTGAAGAGTAAACGTATGCGTGGCATTGCAGATCTTCTTAAAGAAGC-CGAAACTGAT  1344
             |||||||||||||| |||||| ||||||| | |||||||| ||| |||| | || |||| 
Sbjct  1256  ACTTGAAGAGTAAAGGTATGCATGGCATTACCGATCTTCTAAAACAAGCAC-AAGCTGA-  1313

Query  1345  GA-TG-TATCCAAGAAGAACA-TCGAACT-GAAGATCGAAGAA-TTCAAATCAGCTCTTT  1399
             || || | ||||| |||  |  ||||||| ||  || |||||| || |||||||||||||
Sbjct  1314  GAATGGT-TCCAACAAGT-CTGTCGAACTCGAT-ATAGAAGAACTT-AAATCAGCTCTTT  1369

Query  1400  CTCAGGTTGACTCACAAGTGAAGTTTCTTCCAGCTACAGCACAGGTTGCTGCGCAGCAAG  1459
              ||| |||||||||||||||||| |||| ||||| |||| |||||| ||||| || ||||
Sbjct  1370  GTCAAGTTGACTCACAAGTGAAGCTTCTACCAGCGACAGGACAGGTCGCTGCTCAACAAG  1429

Query  1460  GTG-CTTACCTAGCTAAATGCTTTGATCGCATGGAAG-ATTGCGAGAAGAATCCAGAAGG  1517
             | | ||||||| || |||||||||||||| ||||||| || ||||||||||||| |||||
Sbjct  1430  G-GACTTACCTTGCAAAATGCTTTGATCGTATGGAAGTAT-GCGAGAAGAATCCTGAAGG  1487

Query  1518  TCCCATTAGGATGAGAGGAGAAGGTCGTCATCGTTTCCGCCCCTTCAGGTACAGACATTT  1577
             |||||||||||| ||||||||||||||||| || ||||| ||||||||||| ||||||||
Sbjct  1488  TCCCATTAGGATTAGAGGAGAAGGTCGTCACCGCTTCCGTCCCTTCAGGTATAGACATTT  1547

Query  1578  GGGACAATTTGCACCACTGGGAGGGGAGCAAACGGCAGCACAACTTCCAGGAGATTGGGT  1637
             |||||||||||| ||| | ||||| || ||||| || || |||||||||||||| |||||
Sbjct  1548  GGGACAATTTGCTCCATTAGGAGGCGAACAAACCGCGGCGCAACTTCCAGGAGACTGGGT  1607

Query  1638  TTCTATTGGACAAAGCAGCCAGTGGCTCTGGTATTCCGTCTACGCCAGTAAGCAAGTGAG  1697
             ||| || ||||| ||||| || ||||| ||||| ||||| ||||| ||||||||||||||
Sbjct  1608  TTCGATAGGACACAGCAGTCAATGGCTGTGGTACTCCGTTTACGCTAGTAAGCAAGTGAG  1667

Query  1698  CTGGCGTACGAGAGTGCTTGTGGTTTCAGATTGGATGAGGCGTTTCATCTTTGGTAGGGA  1757
             |||||| |||||||| || ||||| ||||| |||||||| || |||||||| || |||||
Sbjct  1668  CTGGCGAACGAGAGTCCTGGTGGTCTCAGACTGGATGAGACGATTCATCTTCGGGAGGGA  1727

Query  1758  TTCCAGTAGCATCTGA  1773
             ||| ||| |||| |||
Sbjct  1728  TTCAAGTCGCATTTGA  1743



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 88704363015


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5