BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg943849 Length=358 Score E Sequences producing significant alignments: (Bits) Value AT4G38860.1 | Symbols: | SAUR-like auxin-responsive protein fa... 579 8e-165 AT2G21220.1 | Symbols: | SAUR-like auxin-responsive protein fa... 326 1e-88 AT1G75580.1 | Symbols: | SAUR-like auxin-responsive protein fa... 130 9e-30 > AT4G38860.1 | Symbols: | SAUR-like auxin-responsive protein family | chr4:18130268-18131060 FORWARD LENGTH=793 Length=793 Score = 579 bits (313), Expect = 8e-165 Identities = 340/353 (96%), Gaps = 1/353 (0%) Strand=Plus/Plus Query 4 AACACTAAAACTAAAC-AATGGCGGTAAAGAGATCTTCAAAGCTAACACAAACAGCAATG 62 ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||| Sbjct 72 AACACTAGAACTAAACAAATGGCGGTAAAGAGATCTTCTAAGCTAACACAAACAGCAATG 131 Query 63 CTAAAGCAAATCCTCAAGAGATGCTCGAGCTTAGGCAAGAAACAATGCTACGACGAGGAA 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 132 CTAAAGCAAATCCTCAAGAGATGCTCGAGCTTAGGCAAGAAACAATGCTACGACGAGGAA 191 Query 123 GGTCTCCCTCTTGACGTACCAAAGGGACATTTTCCGGTTTACGTAGGCGAAAAGCGAACG 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 192 GGTCTCCCTCTTGACGTACCAAAGGGACATTTTCCGGTTTACGTAGGCGAAAAGCGTACA 251 Query 183 AGGTACATCGTACCAATTTCCTTCTTGACTCATCCAGAATTCCTGATCCTTCTTCAACAA 242 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 252 AGGTACATCGTACCAATCTCCTTCTTGACTCATCCTGAATTCCTGATCCTTCTTCAACAA 311 Query 243 GCAGAGGAAGAGTTCGGCTTTCGCCACGACATGGGAGGACTCACTATCCCTTGTGAAGAA 302 ||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||| Sbjct 312 GCAGAGGAAGAGTTCGGCTTTCGTCATGACATGGGAGGACTCACCATCCCTTGTGAAGAA 371 Query 303 GTCGTTTTTCTCTCTCTAACATCCATGATCAGATGAGATAAGAATAGAGAGAG 355 || ||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 372 GTTGTTTTTCTCTCTCTAACATCCATGATCAGATGAGAAAATAATAGAGAGAG 424 > AT2G21220.1 | Symbols: | SAUR-like auxin-responsive protein family | chr2:9089326-9089813 FORWARD LENGTH=488 Length=488 Score = 326 bits (176), Expect = 1e-88 Identities = 283/333 (85%), Gaps = 14/333 (4%) Strand=Plus/Plus Query 12 AACTAAACAATGGCGGTAAAGAGATCTTCAAAGCTAACACAAACAGCAATGCTAAAGCAA 71 |||| | |||||||||| |||||||||||||||||||||||||| |||||||| |||||| Sbjct 47 AACT-AGCAATGGCGGTTAAGAGATCTTCAAAGCTAACACAAACCGCAATGCTGAAGCAA 105 Query 72 ATCCTCAAGAGATGCTCGAGCTTAGGC-AAGAAACAATGCTACGACGAGGAAGGTCTCCC 130 ||||||||||||||||||||||| ||| ||||| |||||||| || ||||| ||||| || Sbjct 106 ATCCTCAAGAGATGCTCGAGCTT-GGCCAAGAATCAATGCTATGATGAGGATGGTCTGCC 164 Query 131 TCTTGACGTACCAAAGGGACATTTTCCGGTTTACGTAGGCGAAAAGCGAA-CGAGGTACA 189 | | |||||||||||||| ||||| ||||| || |||||||||||| | | | |||||| Sbjct 165 TGTAGACGTACCAAAGGGTCATTTCCCGGTCTATGTAGGCGAAAAGAGGAGCC-GGTACA 223 Query 190 TCGTACCAATTTCCTTCTTGACTCATCCAGAA-TTCCTGATCCTT-CTTCAACAAGCAGA 247 ||||||| || ||||||||||||||||| || ||| || | || |||||||| ||||| Sbjct 224 TCGTACCCATATCCTTCTTGACTCATCCT-AAGTTCAAGAGC-TTGCTTCAACAGGCAGA 281 Query 248 GGAAGAGTTCGGCTTTCGC-CACGACATGGGAGGACTCACTATCCCTTGTGAAGAAGTCG 306 ||||||||||| || | || ||||||||| |||||||| |||||||||||||| | Sbjct 282 AGAAGAGTTCGGGTT-CAATCATGACATGGGA---CTCACTATTCCTTGTGAAGAAGTTG 337 Query 307 TTTTTCTCTCTCTAACATCCATGATCAGATGAG 339 |||| | |||| |||||||||||||| |||||| Sbjct 338 TTTTCCGCTCTTTAACATCCATGATCGGATGAG 370 > AT1G75580.1 | Symbols: | SAUR-like auxin-responsive protein family | chr1:28377461-28378178 FORWARD LENGTH=718 Length=718 Score = 130 bits (70), Expect = 9e-30 Identities = 237/314 (75%), Gaps = 25/314 (8%) Strand=Plus/Plus Query 42 AAGCTAACACAAACAGCAATGCTAAAGCAAATCCTCAAGAGATGCTCGAGCTTAGGCAAG 101 |||||||| ||||| || ||| | ||||||||| | ||||| ||||||||||| || ||| Sbjct 91 AAGCTAACGCAAACGGCGATGATCAAGCAAATCTTGAAGAGGTGCTCGAGCTTGGGAAAG 150 Query 102 AAAC-----AATG-CTAC---GACGA-G-GAA-GG-TCTCCCTCTTGACGTACCAAAGGG 148 |||| |||| ||| || || | || || ||| |||||| |||||||||| || Sbjct 151 AAACAGAGTAATGTGTACGGTGAAGACGAAAACGGATCT-CCTCTTAACGTACCAAAAGG 209 Query 149 ACATTTTCCG--GTTTACGTAGGCGAAAAGCGAACGAGGTACATCGTACCAATTTCCTTC 206 || || || || ||||| || || || || |||||| | || || ||||| || Sbjct 210 TCA-CTT-CGTCGTCTACGTCGGAGAGAATCGGGTTAGGTACGTTGTGCCCATTTCGTTT 267 Query 207 TTGACTC-ATCCAGAATTCCTGATCCTTCTTCAACAAGCAGAGGAAGAGTTCGGCTTTCG 265 ||||| | | || || || | | | ||||| |||||||| ||||||||||| |||||| | Sbjct 268 TTGACCCGA-CCTGAGTTTCAGCTTCTTCTCCAACAAGCCGAGGAAGAGTTTGGCTTT-G 325 Query 266 -CCACGACATGGGAGGACTCACTATCCCTTGTGAAGAAGTCGTTTTTCTCTCTCTAACAT 324 || ||||| | || ||||||||||||||||||||||||||||| | ||||| || | Sbjct 326 ATCATGACAT--G-GGTCTCACTATCCCTTGTGAAGAAGTCGTTTTCCGATCTCTCACCT 382 Query 325 CCATGATCAGATGA 338 ||||| || ||||| Sbjct 383 CCATGCTCCGATGA 396 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16789428166 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5