BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg944002 Length=985 Score E Sequences producing significant alignments: (Bits) Value AT4G39970.1 | Symbols: | Haloacid dehalogenase-like hydrolase ... 1613 0.0 > AT4G39970.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:18536538-18538506 REVERSE LENGTH=1168 Length=1168 Score = 1613 bits (873), Expect = 0.0 Identities = 953/991 (96%), Gaps = 8/991 (1%) Strand=Plus/Plus Query 3 AGAGACAGAGATTCATC-A-ATGGCGGTTTCTTGCAGCCACTCTGCGATTCTCTTCTCT- 59 ||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| Sbjct 58 AGAGACAGAGATTCATCGATATGGCGGTTTCTTGCAACCACTCTGCGATTCTCTTCTCTC 117 Query 60 C--CATCCACCGCTGGTTCCTCCTCCGTTTCTTCTTCCTCGTCGCTCATCGGCTTTCCTC 117 | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 118 CATCATCCACCGCTGGTTCCTCCTCCGTTACTTCTTCCTCGTCGCTCATCGGCTTTCCTC 177 Query 118 GTTTCCAAACGCTGCGTTTCAAATCAAGAAGCTTTTATTCTAAATCTAGAG--T-TTCTC 174 |||||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||| Sbjct 178 GTTTCCAAACGCTGCGTTTCAAATCAAGAAGCGTTTATTCGAAATCTAGAGTTTCTTCTC 237 Query 175 CTGTCTCGGCATTGCCTTCACGGTCTCTGGAAGCTCTGATTTTCGATTGCGATGGTGTGA 234 |||||||||||||||||| ||| ||||| ||||||||||||||||||||||| || |||| Sbjct 238 CTGTCTCGGCATTGCCTTTACGTTCTCTAGAAGCTCTGATTTTCGATTGCGACGGCGTGA 297 Query 235 TTCTCGAATCGGAGAATCTACACCGTCAAGCTTACAACGACGCTTTCTCGCATTTCGATG 294 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 298 TTCTCGAATCCGAGAATCTACACCGTCAAGCTTACAACGATGCTTTCTCGCATTTCGATG 357 Query 295 TTCGATGTCCTCCTTCTTCCTCTGAGTCTCTCGATTGGAGCCTCGAGTTCTACGATAAGT 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 TTCGATGTCCTCCTTCTTCCTCTGAGTCTCTCGATTGGAGCCTCGAGTTCTACGATAAGT 417 Query 355 TTCAGAATCTAGTCGGAGGTGGAAAACCGAAAATGCGTTGGTATTTCAAAGAAAATGGAT 414 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 418 TTCAGAATCTAGTCGGAGGTGGGAAACCGAAAATGCGTTGGTATTTCAAAGAAAATGGAT 477 Query 415 GGCCAACTTCCACCATTTTCGAGTCACCTCCTGAGAATGACGCTGATCGAGCCAAGTTAA 474 ||||||||||||||||||| || || |||||| ||||||||| ||||||||||||||||| Sbjct 478 GGCCAACTTCCACCATTTTTGACTCTCCTCCTCAGAATGACGATGATCGAGCCAAGTTAA 537 Query 475 TCGATACTCTTCAGGATTGGAAAACTGAGAGATATAAAGAAATCATAAAATCAGGAAGGG 534 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 538 TCGATACTCTTCAGGATTGGAAAACTGAGAGGTATAAAGAAATCATAAAATCAGGAAGTG 597 Query 535 TAGAACCAAGACCTGGTGTAATAAGACTAATGGATGAAGCAAAAGCTGCTGGGAAAAAAC 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 598 TAGAACCAAGACCTGGTGTAATAAGACTAATGGATGAAGCAAAAGCTGCTGGGAAAAAAC 657 Query 595 TAGCTGTTTGTTCTGCAGCTACAAAGAGTTCAGTAATCTTATGTCTCGAGAATCTAATCG 654 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 658 TAGCTGTTTGTTCTGCAGCTACAAAGAGTTCAGTAATCTTATGTCTCGAGAATCTAATCG 717 Query 655 ATATTGAGCGGTTCCAAGGACTTGATTGCTTCCTTGCAGGAGATGATGTTAAGGAGAAAA 714 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 718 ATATCGAGCGGTTCCAAGGACTTGATTGCTTCCTTGCAGGGGATGATGTTAAGGAGAAAA 777 Query 715 AACCCGATCCTTCGATATATATTACAGCTGCCGAGAAGCTAGGTGTTTCAGTGAAAGACT 774 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 778 AACCCGATCCTTCGATATATATTACAGCTGCCGAGAAGCTAGGTGTTTCAGTGAAAGACT 837 Query 775 GTTTGGTCATAGAGGACAGTGTGATTGGCCTGCAGGCTGCTACAAAAGCAGGGATGTCAT 834 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 838 GTTTGGTCGTAGAGGACAGTGTGATTGGCCTGCAGGCTGCTACAAAAGCAGGGATGTCAT 897 Query 835 GTGTGATTACATACACTTCTTCAACCTCTGATCAGGATTTCAATGATGCGATTGCCGTAT 894 ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 898 GTGTGATCACGTACACTTCTTCAACCTCTGATCAGAATTTCAATGATGCGATTGCCGTAT 957 Query 895 ACCCTGATCTCAGTAATGTGAAATTGAAAGACCTGGAAACTCTGCTTCAAACAATTGTCA 954 ||||||||||||| |||||||||||||| ||| |||||||||||||||||||||| |||| Sbjct 958 ACCCTGATCTCAGCAATGTGAAATTGAAGGACTTGGAAACTCTGCTTCAAACAATAGTCA 1017 Query 955 CTGCAGCTTAAGATATTTGTCTCCTATTCAT 985 ||||||||||||| ||||||||||||||||| Sbjct 1018 CTGCAGCTTAAGACATTTGTCTCCTATTCAT 1048 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 48224781120 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5