BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg944128 Length=566 Score E Sequences producing significant alignments: (Bits) Value AT4G37300.1 | Symbols: MEE59 | maternal effect embryo arrest 59... 881 0.0 > AT4G37300.1 | Symbols: MEE59 | maternal effect embryo arrest 59 | chr4:17554641-17555861 FORWARD LENGTH=1049 Length=1049 Score = 881 bits (477), Expect = 0.0 Identities = 534/561 (95%), Gaps = 5/561 (1%) Strand=Plus/Plus Query 1 AAAGCAGTGGACAGAGAAGACGATGAGTACGATGAAGCCAAGTCGGAGCGACGAAATATC 60 ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct 143 AAAGCAGTGGACAGAGACGACGATGAGTACGATGAAGCCAAGCCGGAGCGACGAAATATC 202 Query 61 CGACCCGGATCAACAGATCAAGAACGCGAACCAGATCAGAGCTGATTTCGATTCCTTGGC 120 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 203 CGACCCGGAACAGCAGATCAAGAACGCGAACCAGATCAGAGCTGATTTCGATTCCTTGGC 262 Query 121 TCCCAAACGACCCACTAAACCCACTCGAAGCGAACCGGGACCTCCTGGATCTTTCTCTGC 180 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 263 TCCCAAACGACCCACTAAACCCACTCGAAGCGAACCGGGATTTCCTGGATCTTTCTCTGC 322 Query 181 CTCCGACAAAACCACCGACCATCCTGAAGCTGACAAATTCAAATCTCTCCAGTCACAAAC 240 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 323 TTCCGACAAAATCACCGACCATCCTGAAGCTGACAAATTCCAATCTCTCCAGTCACAAAC 382 Query 241 TCATGGTAAAGTTCTAGGTGAGGGGGATTCATCTGCAGTTCAAGATGAGTTCTTGGAAAC 300 |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct 383 TCATGGTAAAGTTCTAGGTGAGGGAGATTCATCTGCAGTTCAAGATGAGTTCCTGGAAAC 442 Query 301 AGAGTATTACACAAATCTCACTGCCATTGATAAGCAACATCACACGACCGGAAGTGGGTT 360 |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 443 AGAGTATTACTCAAATCTCACCGCCATTGATAAGCAACATCACACGACCGGAAGTGGGTT 502 Query 361 TATAAATGTGGTCAAGGAAGACGGA-GGTGAAGCGA-CCGAGGCCGTAACCGCCGCCGCA 418 |||||||||||| ||||||||| | ||||||| | ||||||||||||||||||||||| Sbjct 503 TATAAATGTGGTGAAGGAAGACA-ACGGTGAAGA-ATCCGAGGCCGTAACCGCCGCCGCA 560 Query 419 ATCGGAGACGGAGAAGAAAAAGCGGTTTACAGAAGCAATCCGGCGACGAACGAATGGATT 478 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 561 ATCGGAGACGGAGGAGAAAAAGCGGTTTACAGAAGCAATCCGGCGACGAACGAATGGATT 620 Query 479 CCTGCGGCGGAGGAAGATTTTGATTCCGAGTCTTCCTCTAAACCAAACCGGAGCGAGAGT 538 |||||| ||||||||||||||||||| || ||||| |||||||||||||||||||||||| Sbjct 621 CCTGCGACGGAGGAAGATTTTGATTCGGAATCTTCGTCTAAACCAAACCGGAGCGAGAGT 680 Query 539 TCTTGAATTGATCTTTC-AAA 558 ||||||| ||||||||| ||| Sbjct 681 TCTTGAACTGATCTTTCGAAA 701 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27176673527 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5