BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg944158 Length=1093 Score E Sequences producing significant alignments: (Bits) Value AT4G37040.1 | Symbols: MAP1D | methionine aminopeptidase 1D | c... 1762 0.0 > AT4G37040.1 | Symbols: MAP1D | methionine aminopeptidase 1D | chr4:17455139-17457357 FORWARD LENGTH=1361 Length=1361 Score = 1762 bits (954), Expect = 0.0 Identities = 1050/1097 (96%), Gaps = 4/1097 (0%) Strand=Plus/Plus Query 1 AGCTCGCCGAGAAAGCACAAATGGCGGGCGTGAAATCTCTGCAACCCAGACTCATCTCTT 60 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct 17 AGCTCGCCGAGAAAGCACAAATGGCGGGCGTGAAATCTCTGCAACCTAGACTCATATCTT 76 Query 61 CCTTTCTCGGCAACAATTCTATTCGATCAACGCAACCACTTATTCATCTCTTTCGCTTCG 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 77 CCTTTCTCGGCAACAATTCTATTAGATCAACGCAACCACTTATTCATCTCTTTCGCTTCG 136 Query 121 ATTTAGGAAGAAGACATGTTTCGATGCAATTATCAAGAACCTTTTCCGGATTAACCAATC 180 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct 137 ATTTAGGAAGAAGACATGTTTCGATGCAATTATCAAGAACCTTTTCTGGATTAACCGATC 196 Query 181 TCCTGTTTAATAGAAGAAATGAAGATGAAGTTATTGATGGCAAGAGAAAACGTCTGAGAC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 197 TCCTGTTTAATAGAAGAAATGAAGATGAAGTTATTGATGGCAAGAGAAAACGTCTGAGAC 256 Query 241 CTGGAAATGTATCTCCTCGTCGTCCTGTCCCGGACCATATAACAAAACCTCCTTATGTTG 300 | |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct 257 CGGGAAATGTATCTCCTCGTCGTCCTGTTCCGGGTCATATAACAAAACCTCCTTATGTTG 316 Query 301 ATTCTTTTAAAGCTCCCGGAATCTCAAGTGGACTTGAAATTCATGATAAGAAAGGTATAG 360 ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 317 ATTCTCTTCAAGCTCCCGGAATCTCAAGTGGACTTGAAGTTCATGATAAGAAAGGTATAG 376 Query 361 AATGCATGAGAGCTTCCGGAAAACTTGCAGCTAGGGTTCGGGAATACGCTGGGACTTTGG 420 |||||||||||||||| |||| |||||||||||||||||| || |||||||| ||||||| Sbjct 377 AATGCATGAGAGCTTCTGGAATACTTGCAGCTAGGGTTCGAGATTACGCTGGCACTTTGG 436 Query 421 TTAAGCCAGGCGTAACCACAGATGAAATCGATGAAGCAGTTCACAATATGATTATTGAGA 480 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 437 TTAAGCCAGGCGTAACCACTGATGAAATCGATGAAGCAGTTCACAATATGATTATTGAGA 496 Query 481 ATGGAGCGTATCCTTCGCCTCTTGGTTATGGAGGTTTTCCGAAGAGTGTCTGCACATCTG 540 ||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||||||| Sbjct 497 ATGGAGCTTATCCTTCGCCTCTTGGTTATGGAGGTTTCCCGAAAAGTGTTTGCACATCTG 556 Query 541 TGAATGAATGCATTTGCCATGGAATACCAGATTCAAGACCACTTGAGGATGGGGATATAA 600 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 557 TGAATGAATGCATTTGCCATGGTATACCAGATTCAAGACCACTTGAGGATGGGGATATTA 616 Query 601 TCAACATCGATGTCACAGTTTATTTGAATGGTTATCATGGTGATACTTCAGCAACTTTCT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 617 TCAACATCGATGTCACAGTTTATTTGAATGGTTATCATGGTGATACTTCAGCAACTTTCT 676 Query 661 TCTGTGGAAATGTTGACGAGAAGGCTAAAAAGCTAGTCGAGGTGACAAAAGAGTCTCTCG 720 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 677 TCTGTGGAAATGTTGACGAGAAGGCTAAAAAGCTAGTCGAGGTGACGAAAGAGTCTCTCG 736 Query 721 ACAAAGCTATATCAATATGTGGTCCTGGAGTTGAGTACAAGAAAATCGGCAAAATCATTC 780 ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 737 ACAAAGCAATATCAATATGTGGTCCCGGAGTTGAGTACAAGAAAATCGGCAAAGTCATTC 796 Query 781 ATGATCTTGCAGATAAACATAGATATGGGGTTGTTCGACAATTTGTAGGCCATGGGGTTG 840 ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct 797 ATGATCTTGCAGATAAACATAAATATGGAGTTGTTCGACAATTTGTAGGCCACGGGGTTG 856 Query 841 GCAGCGTCTTCCACGCAGATCCAGTTGTTCTACATTTCCGGAACAATGAAGCTGGACGTA 900 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct 857 GCAGCGTCTTCCACGCTGATCCAGTTGTTCTGCATTTCCGGAACAATGAAGCTGGACGTA 916 Query 901 TGGTCTTGAATCAAACCTTCACCATAGAACCAATGCTTACGATAGGAAGCAGAAACCCGG 960 ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct 917 TGGTCTTGAATCAAACCTTCACCATTGAACCGATGCTTACAATAGGAAGCAGAAACCCGA 976 Query 961 TAATGTGGGATGATAACTGGACCGTGGTAACGGAAGATGCAAGCCTCTCTGCGCAATTCG 1020 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct 977 TAATGTGGGATGATAACTGGACCGTGGTAACAGAAGATGCAAGCCTCTCGGCGCAATTCG 1036 Query 1021 AGCATACGATTCTTATAACCAAAGATGGTGCTGAGATTCTAACCAACTGTTAAAAA--TG 1078 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 1037 AGCATACCATTCTTATAACCAAAGATGGTGCTGAGATTCTAACCAAGTGTTAAAAAAATG 1096 Query 1079 AATCTTAAA--TTGATC 1093 | ||| ||| |||||| Sbjct 1097 ATTCTGAAAAATTGATC 1113 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53563981515 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5