BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg944483 Length=1687 Score E Sequences producing significant alignments: (Bits) Value AT4G34240.1 | Symbols: ALDH3I1, ALDH3 | aldehyde dehydrogenase ... 2617 0.0 > AT4G34240.1 | Symbols: ALDH3I1, ALDH3 | aldehyde dehydrogenase 3I1 | chr4:16389620-16392824 FORWARD LENGTH=2025 Length=2025 Score = 2617 bits (1417), Expect = 0.0 Identities = 1603/1694 (95%), Gaps = 8/1694 (0%) Strand=Plus/Plus Query 1 TTTTTAACTGAACCCAAGTCATGACGAAGCCTCTAGAGATGAATC--A-T---GCCCTTT 54 |||||||||||||||||||||||||||||| ||||||||| |||| | | |||||| Sbjct 162 TTTTTAACTGAACCCAAGTCATGACGAAGCTTCTAGAGATTAATCATATTCAAACCCTTT 221 Query 55 GTTTTGCCAAGGGTTTTTCTCGTACCAGATTAAATGTTGCAACTTCACCCTTTCTGATAT 114 ||||||||||||||||||||| | ||||||||||||||||||||||||| |||| ||||| Sbjct 222 GTTTTGCCAAGGGTTTTTCTCCTGCCAGATTAAATGTTGCAACTTCACCTTTTCGGATAT 281 Query 115 CTCGTGGTGGTGGTGGTGGATATTGCAGCAATACTTGTATCCCTTATCGCTTGAAATTTA 174 ||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 282 CTCGTCGTGGTGGTGGTGGATATTGCAGCAATGCTTGTATCCCTTATCGGTTGAAATTTA 341 Query 175 CTTGCTATGCAACACTATCTGCTGTGGTAAAGGAGCAAACATCAG-CTTTTGATGGAAAA 233 |||| ||||||||||||||||||||||||||||||||| |||||| |||| | ||||||| Sbjct 342 CTTGTTATGCAACACTATCTGCTGTGGTAAAGGAGCAAGCATCAGACTTTAG-TGGAAAA 400 Query 234 GAAGCAGCTTTGCTTGTTGATGAGCTCAGAAGCAACTTTAACACCGGTAGAACAAAGAGC 293 ||||||||||||||||| |||||||||||||||||||| ||| | || ||||| |||||| Sbjct 401 GAAGCAGCTTTGCTTGTAGATGAGCTCAGAAGCAACTTCAACTCTGGCAGAACGAAGAGC 460 Query 294 TATGAGTGGAGAATTTCTCAGCTTCAAAGCATTGCTAGGATGATTGATGAGAAGGAGAAA 353 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 461 TACGAGTGGAGAATTTCTCAGCTTCAAAACATTGCTAGGATGATTGATGAGAAGGAGAAA 520 Query 354 TGTATCACCGAAGCTTTGTATCAAGACCTTTCCAAGCCTGAGCTTGAAGCTTTTCTAGCT 413 || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 521 TGCATCACCGAAGCTTTGTATCAAGATCTTTCTAAGCCTGAGCTTGAAGCTTTTCTAGCT 580 Query 414 GAGATTTCGAATACAAAATCATCCTGTATGCTTGCAATCAAAGAGTTGAAGAATTGGATG 473 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 581 GAGATTTCGAATACAAAATCATCCTGTATGCTTGCAATCAAAGAGTTAAAGAACTGGATG 640 Query 474 GCTCCAGAAACGGTCAAAACTTCTGTGACGACATTTCCCTCGTCTGCAGAAATAGTCTCA 533 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct 641 GCTCCAGAAACGGTCAAAACTTCTGTGACAACATTTCCCTCGTCTGCACAAATAGTCTCA 700 Query 534 GAGCCGCTAGGAGTTGTTTTGGTTATCTCAGCCTGGAATTTCCCTTTCTTATTGTCTGTC 593 || ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 701 GAACCGCTTGGAGTTGTTTTGGTTATTTCAGCCTGGAATTTCCCTTTCTTATTGTCTGTC 760 Query 594 GAGCCAGTCATTGGAGCTATTGCAGCTGGTAATGCGGTTGTGCTTAAACCTTCTGAAATC 653 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 761 GAGCCAGTCATTGGAGCTATTGCAGCTGGTAATGCGGTTGTGCTAAAACCTTCTGAAATT 820 Query 654 GCTCCAGCAGCATCTTCTCTTTTAGCAAAGTTGTTCAGTGAATACTTGGACAATACAACA 713 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 821 GCTCCAGCAGCATCTTCTCTTTTAGCAAAGTTGTTTAGTGAATACTTGGACAATACAACA 880 Query 714 ATCCGAGTTATAGAGGGAGGAGTCCCTGAAACAACAGCACTACTGGATCAAAAATGGGAA 773 ||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 881 ATCAGAGTTATCGAGGGAGGAGTCCCTGAAACAACGGCACTACTGGATCAAAAATGGGAC 940 Query 774 AAGATCTTCTTCACTGGTGGAGCAAGAGTTGCTCGCATTATAATGGCTGCAGCTGCGAAA 833 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 941 AAGATCTTTTTCACTGGTGGAGCAAGAGTTGCTCGCATTATAATGGCTGCGGCTGCGAGA 1000 Query 834 AATCTTACTCCAGTGGTTCTCGAACTTGGTGGAAAGTGCCCAGCTCTTGTTGATTCAGAT 893 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1001 AATCTTACTCCAGTGGTTCTCGAACTTGGTGGGAAGTGCCCAGCTCTTGTTGATTCAGAT 1060 Query 894 GTTAATCTACAAGTAGCTGCTAGGAGGATCATAGCAGGGAAATGGGCTTGTAACAGTGGA 953 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1061 GTTAATCTACAAGTGGCTGCTAGGAGGATCATTGCAGGGAAATGGGCTTGTAACAGTGGA 1120 Query 954 CAGGCTTGCATTGGCGTCGATTACGTGATCACAACAAAGGATTTTGCATCAAAATTGATA 1013 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 1121 CAGGCTTGCATTGGTGTTGATTACGTGATCACAACAAAGGATTTTGCATCAAAATTGATA 1180 Query 1014 GATGCTCTGAAGACTGAACTGGAGACATTTTTTGGGCAAAACGCATTAGAATCAAAGGAC 1073 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1181 GATGCTCTGAAGACTGAACTGGAGACATTTTTTGGGCAAAACGCATTAGAATCAAAGGAC 1240 Query 1074 CTGTCACGGATTGTGAACTCTTTCCACTTCAAACGGTTGGAGAGTATGTTAAAAGAGAAT 1133 ||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct 1241 CTGTCGCGGATTGTGAACTCTTTCCACTTCAAAAGGTTGGAAAGTATGTTAAAAGAGAAT 1300 Query 1134 GGAGTCGCCAACAAAATTGTTCATGGTGGCCAAACAACCGAAGATAAACTAAAAATATCT 1193 ||||| ||||||||||||||||||||||||| || ||||||||||||||| |||||||| Sbjct 1301 GGAGTAGCCAACAAAATTGTTCATGGTGGCCGAATAACCGAAGATAAACTTAAAATATCA 1360 Query 1194 CCAACGATTCTACTGGATGTGCCAGAAGCATCTTCCATGATGCAGGAAGAGATATTTGGA 1253 ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1361 CCAACAATACTACTGGATGTGCCTGAAGCATCTTCCATGATGCAGGAAGAGATATTTGGA 1420 Query 1254 CCTTTACTTCCCGTAATTACGGTGCAAAAGATTGAAGATGGCTTTCAGGTTATACGTTCA 1313 |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1421 CCTTTACTTCCCATAATTACGGTACAAAAGATTGAAGATGGCTTTCAGGTTATACGTTCA 1480 Query 1314 AAGCCAAAGCCTCTAGCAGCGTATCTGTTCACAAACAGCACAGAGTTGCAGAAACAATTC 1373 |||||||||||| ||||||||||||| |||||||||| || ||||||| ||||||||||| Sbjct 1481 AAGCCAAAGCCTTTAGCAGCGTATCTCTTCACAAACAACAAAGAGTTGGAGAAACAATTC 1540 Query 1374 GTGCAGAACGTATCTGCAGGAGGAATGACCATCAATGACACTGTCTTACACGTAACTGTA 1433 |||||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||| Sbjct 1541 GTGCAGGACGTATCAGCAGGAGGAATTACCATCAATGACACTGTCTTACACGTGACTGTA 1600 Query 1434 AAAGATTTGCCATTTGGTGGGGTAGGGGAGAGCGGGATCGGTGCTTACCACGGGAAATTC 1493 |||||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct 1601 AAAGATCTGCCATTTGGTGGGGTTGGGGAGAGTGGGATCGGTGCTTACCATGGGAAATTC 1660 Query 1494 TCGTATGAGACGTTTAGCCATAAGAAAGGAGTACTTTACCGGAGCTTTTCAGGGGACGCG 1553 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1661 TCGTATGAGACGTTTAGCCATAAGAAAGGAGTTCTTTACCGGAGCTTTTCAGGGGACGCG 1720 Query 1554 GATCTAAGATATCCTCCTTACACACCCAAAAAGAAGATGGTTCTGAAAGCTTTGATCTCT 1613 ||||| |||||||||||||||||||| |||||||||||||| || || |||||| ||||| Sbjct 1721 GATCTTAGATATCCTCCTTACACACCAAAAAAGAAGATGGTGCTTAAGGCTTTGCTCTCT 1780 Query 1614 TCAAACATATTTGCTGCTATCTTGGCTTTCTTTGGGTTATCTAAAGAGTCATGATCACAT 1673 ||||||||||||||||| || ||||||||||||||||| |||||||| |||||||||||| Sbjct 1781 TCAAACATATTTGCTGCCATTTTGGCTTTCTTTGGGTTCTCTAAAGACTCATGATCACAT 1840 Query 1674 GTTATAATCACTGA 1687 |||||||||||||| Sbjct 1841 GTTATAATCACTGA 1854 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 83383105245 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5