BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg944714 Length=414 Score E Sequences producing significant alignments: (Bits) Value AT4G32470.1 | Symbols: | Cytochrome bd ubiquinol oxidase, 14kD... 686 0.0 > AT4G32470.1 | Symbols: | Cytochrome bd ubiquinol oxidase, 14kDa subunit | chr4:15669219-15671194 REVERSE LENGTH=890 Length=890 Score = 686 bits (371), Expect = 0.0 Identities = 400/414 (97%), Gaps = 2/414 (0%) Strand=Plus/Plus Query 1 CTGAAATTGAGAGAGACAAAGAAAAATGGCGTCTCTTCTGAAATCGTTCATCGATCCAAA 60 |||||||||||||||||| |||||||||||||| ||||||||| | |||||||||||||| Sbjct 75 CTGAAATTGAGAGAGACAGAGAAAAATGGCGTCGCTTCTGAAAGCATTCATCGATCCAAA 134 Query 61 GAAGAACTTCCTCGCTCGTATGCATATGAAAGCCATCTCTACTCGCCTTCGCAGATACGG 120 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 135 GAAGAACTTCCTCGCTCGTATGCATATGAAAGCCATATCTACTCGCCTTCGCAGATACGG 194 Query 121 TCTGAGGTACGATGATCTGTACGATCAGTATTATAGTATGGACATCAAAGAGGCTATGAA 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 195 TCTGAGGTACGATGATCTGTACGATCAGTATTACAGTATGGACATCAAAGAGGCTATGAA 254 Query 181 CAGATTGCCCAGGGAGGTCGTTGATGCTCGTAACCAGCGTCTCAAGCGTGCCATGGACCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 255 CAGATTGCCCAGGGAGGTCGTTGATGCTCGTAACCAGCGTCTCAAGCGTGCCATGGACCT 314 Query 241 CTCCATGAAGCACGAGTATCTCCCCAAGGATCTTCAGGCGGTGCAGACCCCATTCCGTGG 300 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 315 CTCCATGAAGCACGAGTACCTCCCCAAGGATCTTCAGGCGGTGCAGACCCCATTCCGTGG 374 Query 301 CTATCTTCAGGATATGCTGGCTCTTGTTGAGAGGGAAAGCAAAGAACGAGAGGCCTTGGG 360 |||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct 375 CTATCTTCAGGACATGCTTGCTCTTGTTGAGAGGGAAAGCAAGGAACGAGAGGCCTTGGG 434 Query 361 AGCTCTACCACTATACCAGCGCACACTCCCATAAGAATTCATATTCCCCCTTTT 414 ||||||||||||||||||||||||||||||||||| |||| | |||||| |||| Sbjct 435 AGCTCTACCACTATACCAGCGCACACTCCCATAAGCATTCCT-TTCCCC-TTTT 486 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19604422110 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5