BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg944743 Length=2377 Score E Sequences producing significant alignments: (Bits) Value AT4G32190.1 | Symbols: | Myosin heavy chain-related protein | ... 3666 0.0 > AT4G32190.1 | Symbols: | Myosin heavy chain-related protein | chr4:15544878-15547855 FORWARD LENGTH=2692 Length=2692 Score = 3666 bits (1985), Expect = 0.0 Identities = 2201/2306 (95%), Gaps = 12/2306 (1%) Strand=Plus/Plus Query 39 TCTCAGGCCATTCGCCTGAATCTTGCTTCCTACTCCTCTCTCTCTCCCTACCAGTATTGT 98 ||||||||||||||| ||||||||||||||| |||||||| |||||||| | | |||||| Sbjct 184 TCTCAGGCCATTCGCTTGAATCTTGCTTCCTTCTCCTCTCCCTCTCCCTGCGATTATTGT 243 Query 99 TCGACAAGAGTAGCAAACCAGAAGCAGAAGAGTCTTGTCGCATTCCCGAGCATTAGAAGG 158 | ||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||| Sbjct 244 TTGACAAGAGTAGTAAACCATAAGCAGAAGAGTCTTGTCGCATTCCCGAGCATTACAAGG 303 Query 159 ACAAAGAGACATGC-TTTACTAAGTGTTCAATCAGTCTTGCACAATACAAGACCCAACAT 217 | |||||||||| | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct 304 AGAAAGAGACAT-CTTTTACTGAGTGTTCAATCAGTCTTGCACAATACAAGACCCAACAT 362 Query 218 CAATGATAATGGAACAGCTGAGTCTGCTAATGTTCTTTTCGATAAATTATTTGCTCGGAC 277 ||| || ||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 363 CAACGACAATGGCTCAGCTGAGTCTGCAAATGTTCTTTTCGATAAATTATTTGCTCGGAC 422 Query 278 ACAGAGATTGGAAAGACAAACCAATCAACACTCGGTTTATCCTGACGATGATGATCTGCC 337 ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 423 ACACAGATTGGAGAGACAAACCAATCAACACTCGGTTTATCCTGACGATGATGATCTCCC 482 Query 338 CTATTCAAACATTGGGGTGCTTGAGTCTGACCTTGAGGCTGCGCTAGTGGCTTTGTTGAA 397 |||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct 483 CTATTCAAACCTTGGCGTGCTTGAGTCTGACCTTGAGGCTGCGCTAGTGGCCTTGTTGAA 542 Query 398 AAGGGAAGAGGACTTGCAGGATGCTGAGAGGAAGCTTCTCTCTGATAAAAATAAACTAAA 457 ||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| || Sbjct 543 AAGGGAAGAGGACCTGCACGATGCTGAGAGGAAGCTTCTCTCTGACAAAAATAAACTTAA 602 Query 458 CCAGGCAAAGGAGGAGTTAGAAAAACGTGAGAAAACAATCTCTGAAGCTTCTTTGAAGCA 517 || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 603 CCGGGCAAAGGAGGAGTTAGAAAAACGTGAGAAAACAATCTCTGAAGCTTCGTTGAAGCA 662 Query 518 TGAGAGTCTACAAGAGGAGCTGAAGCGGGCTAATGTCGAGTTAGCTTCTCAAGCCAGGGA 577 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 663 TGAGAGTCTACAAGAGGAGCTGAAGCGGGCAAATGTGGAGTTAGCTTCTCAAGCCAGGGA 722 Query 578 GATAGAAGAATTAAAGCATAAACTAAGGGAAAGAGACGAGGAACGTGCTGCTTTGCAATT 637 ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 723 GATAGAAGAGTTAAAGCATAAGCTAAGGGAAAGAGACGAGGAACGTGCTGCTTTGCAATC 782 Query 638 GTCCTTGACTTTGAAAGATGAAGAGCTAGAGAAAATGCGTCAAGAGATTGCAAATAGAAG 697 |||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| Sbjct 783 GTCCTTGACTTTGAAAGAGGAAGAGCTAGAGAAGATGCGTCAAGAGATTGCAAACAGAAG 842 Query 698 CAAGGAGGTTTCTGTGGCCATTTCTGAATTTGAAAGCAAGTCACAACTCTTAAGCAAAAC 757 ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| | Sbjct 843 CAAGGAGGTTTCTATGGCTATTTCTGAATTTGAAAGCAAGTCACAACTCTTAAGCAAAGC 902 Query 758 CAACGAAGTTGTCAAGAGACAAGAAGGTGAAATACATGCACTTCAGAGAGC-CTTAGAGG 816 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||| Sbjct 903 CAACGAAGTTGTCAAGAGACAAGAAGGTGAAATATATGCACTTCAGAGAGCTCTT-GAGG 961 Query 817 AGAAGGAAGAAGAACTAGAGATTTCTAAGGCTACgaagaaacttgaacaagaaaagctca 876 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 962 AGAAGGAAGAAGAATTAGAGATTTCTAAGGCTACGAAGAAACTTGAACAAGAAAAGCTTA 1021 Query 877 gagaaacagaagccaacttgaagaagcagacagaagaGTGGCTGATAGCCCAGGATGAAG 936 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1022 GAGAAACAGAAGCCAACTTGAAGAAACAGACAGAAGAGTGGCTGATAGCCCAGGATGAAG 1081 Query 937 TGAATAAGCTTAAGGAGGAAACAGTGAAACGCTTAGGAGAAGCCAATGAAACCATGGAGG 996 ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 1082 TGAATAAGCTTAAAGAGGAAACCGTGAAACGTTTAGGAGAAGCCAATGAAACCATGGAGG 1141 Query 997 ACTTCTTGAAAGTGAAAAAGCTACTGACTGATGTGAGATTCGAGCTTATTTCTTCTCGGG 1056 ||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 1142 ACTTCATGAAAGTGAAAAAGCTTCTGACTGATGTAAGATTCGAGCTTATTTCTTCTCGGG 1201 Query 1057 AAGCTTTGGTATTTTCCAGGGAGCAAATGGAAGAAAAAGAGCTACTATTAGAAAAACAAT 1116 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1202 AAGCTTTGGTATTTTCCAGGGAGCAAATGGAAGAAAAAGAGCTACTATTGGAAAAACAAT 1261 Query 1117 TGGAAGAACTCGAGGAACAGAGGAAAAGTGTGTTGTCATATATGCAAAGCTTGAGGGATG 1176 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1262 TGGAGGAACTCGAGGAACAGAGGAAAAGTGTGTTGTCATATATGCAAAGCTTGAGGGATG 1321 Query 1177 CTCACACTGAAGTAGAGAGTGAGAGAGTAAAGCTCAGAGTTGTTGAGGCTAAGAATTTTG 1236 | ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1322 CGCACACTGAAGTTGAAAGTGAGAGAGTAAAGCTCAGAGTTGTTGAGGCTAAAAATTTTG 1381 Query 1237 CGCTTGAGCGGGAAATATCGGTCCAAAAAGAACTGCTGGAGGATTTACGAGAGGAGTTGC 1296 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1382 CGCTTGAGCGGGAAATATCGGTCCAAAAAGAATTGCTGGAGGATTTACGAGAGGAGTTGC 1441 Query 1297 AGAAAGAGAAACCATTGTTGGAGCAAGCTATGCATGATATATCCGTTATTCAAGATGAGC 1356 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1442 AGAAAGAGAAACCATTGTTGGAGCTAGCTATGCATGATATATCCGTTATTCAAGATGAGC 1501 Query 1357 TTTACAAAAAAGCTAACGCGTTTCAGGTATCACAGAATCTACTTCAGGAGAAAGAGTCAA 1416 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1502 TTTACAAAAAAGCTAATGCGTTTCAGGTATCACAAAATCTACTTCAGGAGAAAGAGTCAA 1561 Query 1417 GTTTGGTGGAGGCCAAACTAGAGATTCAGCATCTGAAGTCCGAACAGGCTTCTCTAGAAC 1476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1562 GTTTGGTGGAGGCCAAACTAGAGATTCAGCATCTGAAGTCCGAACAGGCTTCTCTAGAAC 1621 Query 1477 TATTACTGCAAGAAAAGGATGAAGAACTCACGGAAGCTCGAAATAAATTGGAAGAAGTGA 1536 ||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||| Sbjct 1622 TATTACTGCAAGAAAAGGATGAAGAACTCGCTGAAGCTCGAAATAAATTGGGAGAAGTGA 1681 Query 1537 ACCGGGAGGTAACAGAGCTAAAGGCACTTATGGTCAGTAAAGAAGATCAGCTTATGGAGG 1596 ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 1682 ACCAGGAGGTAACAGAGCTAAAGGCACTTATGATCAGTAGAGAAGATCAGCTTATGGAGG 1741 Query 1597 CAACTGAAATGCTGAAAGAGAAAGATGTCCACCTTCACAGAATAGAAGGTGAGTTGGGCA 1656 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1742 CAACTGAGATGCTGAAGGAGAAAGATGTCCACCTTCACAGAATAGAAGGTGAGTTGGGCA 1801 Query 1657 GTTCCAAGCTGAAAGTCACTGAAGCTGAAATGGTGGTGGAAAGAATTGCAGAATTGACGA 1716 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1802 GTTCCAAGCTGAAAGTCACTGAAGCTGAAATGGTGGTGGAAAGAATTGCAGAATTGACGA 1861 Query 1717 GCAGATTGCTTATGTCAACCACCGAA-GGTCAAAATCAGAACGCAATGAGGATTAACAAT 1775 |||| ||||||||||||||||| || |||||||||||||| |||||||||||||||||| Sbjct 1862 ACAGACTGCTTATGTCAACCACC-AACGGTCAAAATCAGAATGCAATGAGGATTAACAAT 1920 Query 1776 GAGATAAGCTTTGACGCAATGCAGCAACCACTAGAGAAACCTCATGATGATTACGGAATG 1835 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1921 GAGATAAGCATTGACTCAATGCAGCAACCACTAGAGAAACCTCATGATGATTACGGAATG 1980 Query 1836 GAGAACAAACGGCTGGTGATGGAGTTAAGCTTCACCAGAGAAAATCTACGGATGAAAGAA 1895 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1981 GAGAACAAACGGCTGGTGATGGAGTTAAGCTTCACCAGAGAAAATCTACGGATGAAAGAA 2040 Query 1896 ATGGAAGTTCTAGCGGTGCAGAGGGCTTTGACATTTAAAGACGAAGAGATCAACGTGGTC 1955 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2041 ATGGAAGTTCTAGCGGTGCAGAGGGCTTTGACATTTAAAGACGAAGAGATCAACGTGGTC 2100 Query 1956 ATGGGAAGATTAGAAGCCAAGGAGCGGGAACTCAAGAAACTGAAAGAAGAAACGATCAAT 2015 ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct 2101 ATGGGAAGATTAGAAGCCAAGGAGCAGGAACTCAAGAAATTGAAAGAAGAAACGATCAAT 2160 Query 2016 GACAGTGAAGATTTGAAAGTGCTCTATGCCTTGGCACAAGAGAGAATAGGGGAGAAAACA 2075 ||||||||||||||||||||||| ||||||||||||||||||||| | ||||| |||||| Sbjct 2161 GACAGTGAAGATTTGAAAGTGCTATATGCCTTGGCACAAGAGAGAGTCGGGGAAAAAACA 2220 Query 2076 ATGGGTGAGCTAGCCATAGAGAAGCTTCAGCTTGAGGCGGCTCAAC-TTGAAGTTGAAGC 2134 |||||||| || |||||||||| ||||||||||||||| ||| ||| ||||||||||||| Sbjct 2221 ATGGGTGATCTGGCCATAGAGATGCTTCAGCTTGAGGCAGCT-AACCTTGAAGTTGAAGC 2279 Query 2135 TGCAACCAGTGCATTACAGAAGCTTGCAGAAATGAGCACGGAACT-TCTAACTCAAGCTG 2193 ||| |||||||||||||||||||||||| |||||||||||||||| | |||||||||||| Sbjct 2280 TGCGACCAGTGCATTACAGAAGCTTGCAAAAATGAGCACGGAACTGT-TAACTCAAGCTG 2338 Query 2194 ACATGAGCATTGAGGCCGACCCAACTTACATTGTAATGCCAGAGAAAGGGTATCCAGAAG 2253 |||||||||||||||||||| ||||| ||| |||||||||||||| ||||||| |||||| Sbjct 2339 ACATGAGCATTGAGGCCGACACAACTCACACTGTAATGCCAGAGAGAGGGTATTCAGAAG 2398 Query 2254 GAAGTAATGGGTGTATTGCG-GAGGTAAAAACAGAAGTTGTCAGGCTCTGGTCCTTGACA 2312 ||||||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||| Sbjct 2399 GAAGTAATGAGTGTCTTG-GTGAGGTAAAAACAGAAGTTGTCAGGCTCTGGTCCTTGACA 2457 Query 2313 GAGAAACTCCTGGAGAATGCAGGAAT 2338 ||||||||||||||||| |||||||| Sbjct 2458 GAGAAACTCCTGGAGAACGCAGGAAT 2483 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 118021481295 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5