BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg945111
Length=1532
Score E
Sequences producing significant alignments: (Bits) Value
AT4G29130.1 | Symbols: ATHXK1, GIN2, HXK1 | hexokinase 1 | chr4... 2595 0.0
AT2G19860.1 | Symbols: ATHXK2, HXK2 | hexokinase 2 | chr2:85707... 1332 0.0
> AT4G29130.1 | Symbols: ATHXK1, GIN2, HXK1 | hexokinase 1 | chr4:14352037-14355103
REVERSE LENGTH=2030
Length=2030
Score = 2595 bits (1405), Expect = 0.0
Identities = 1490/1532 (97%), Gaps = 1/1532 (0%)
Strand=Plus/Plus
Query 1 TTGATTCCAAATCGGAGAAAATGGGTAAAGTAGCTGTTGGAGCGACGGTTGTTTGCACGG 60
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 220 TTGATTCCAAATCGGA-AAAATGGGTAAAGTAGCTGTTGGAGCGACTGTTGTTTGCACGG 278
Query 61 CGGCGGTTTGTGCGGTGGCTGTTTTGGTTGTTCGACGACGGATGCAGAGCTCAGGGAAGT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 279 CGGCGGTTTGTGCGGTGGCTGTTTTGGTTGTTCGACGACGGATGCAGAGCTCAGGGAAGT 338
Query 121 GGGGACGTGTTTTGGCCATCCTTAAGGCTTTTGAAGAGGATTGTGCGACTCCGATCTCGA 180
|||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 339 GGGGACGTGTTTTGGCTATCCTCAAGGCCTTTGAAGAGGATTGTGCGACTCCGATCTCGA 398
Query 181 AACTGAGACAAGTGGCTGATGCTATGACCGTTGAGATGCATGCTGGTCTTGCATCCGACG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 399 AACTGAGACAAGTGGCTGATGCTATGACCGTTGAGATGCATGCTGGTCTTGCATCCGACG 458
Query 241 GTGGTAGCAAACTCAAAATGCTTATCAGCTACGTTGATAATCTTCCTTCTGGGGATGAAA 300
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 459 GTGGTAGCAAACTCAAGATGCTTATCAGCTACGTTGATAATCTTCCTTCCGGGGATGAAA 518
Query 301 AGGGTCTCTTTTATGCATTGGACCTAGGTGGAACAAACTTCCGTGTCATGCGTGTGCTTC 360
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 519 AGGGTCTCTTTTATGCATTGGACCTAGGGGGGACAAACTTCCGTGTCATGCGTGTGCTTC 578
Query 361 TTGGCGGGAAGCAAGAGCGTGTTGTTAAACAAGAATTCGAAGAAGTTTCGATTCCTCCCC 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 579 TTGGCGGGAAGCAAGAGCGTGTTGTTAAACAAGAATTCGAAGAAGTTTCGATTCCTCCTC 638
Query 421 ATTTGATGACTGGTGGTTCAGATGAATTGTTCAATTTTATCGCTGAAGCTCTTGCGAAGT 480
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 639 ATTTGATGACTGGTGGTTCAGATGAGTTGTTCAATTTTATAGCTGAAGCTCTTGCGAAGT 698
Query 481 TTGTCGCCACAGAATGCGAAGACTTTCATCTCCCGGAAGGTAGACAGAGGGAATTAGGCT 540
||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| |
Sbjct 699 TTGTCGCTACAGAATGCGAAGACTTTCATCTTCCAGAAGGTAGACAGAGGGAATTAGGTT 758
Query 541 TCACTTTCTCGTTTCCGGTTAAGCAGACTTCTTTATCCTCTGGTAGTCTCATCAAATGGA 600
|||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||
Sbjct 759 TCACTTTCTCGTTTCCTGTTAAGCAGACTTCTCTGTCCTCTGGTAGTCTCATCAAATGGA 818
Query 601 CAAAAGGCTTTTCCATCGAAGAAGCAGTTGGACAAGATGTTGTTGGAGCACTTAATAAGG 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 819 CAAAAGGCTTTTCCATCGAAGAAGCAGTTGGACAAGATGTTGTTGGAGCACTTAATAAGG 878
Query 661 CTATGGAAAGAGTTGGGCTTGACATGCGAATCGCAGCACTTGTTAATGATACCGTTGGAA 720
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 879 CTCTGGAAAGAGTTGGTCTTGACATGCGAATCGCAGCACTTGTTAATGATACCGTTGGAA 938
Query 721 CACTAGCTGGTGGTAGATACTATAACCAGGATGTTGTTGCTGCTGTTATTTTAGGCACTG 780
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 939 CACTAGCCGGTGGTAGATACTATAACCCGGATGTTGTTGCTGCTGTTATTTTAGGCACTG 998
Query 781 GGACAAACGCAGCCTATGTTGAGCGTGCAACGGCGATCCCCAAATGGCATGGTCCGCTTC 840
||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||
Sbjct 999 GGACAAACGCAGCCTATGTTGAGCGTGCAACCGCGATCCCTAAATGGCATGGTCTGCTTC 1058
Query 841 CAAACTCAGGAGAAATGGTTATAAACATGGAATGGGGAAACTTCAGGTCATCACATCTCC 900
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1059 CAAAATCAGGAGAAATGGTTATAAACATGGAATGGGGAAACTTCAGGTCATCACATCTTC 1118
Query 901 CATTAACAGAGTTTGATCACTCGCTGGATTTCGAGAGTCTGAATCCAGGCGAACAGATTC 960
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1119 CATTAACCGAGTTTGATCACACGCTGGATTTCGAGAGTCTGAATCCAGGCGAACAGATTC 1178
Query 961 TTGAGAAAATCATTTCCGGTATGTACTTGGGAGAGATTTTGCGAAGAGTTCTTCTAAAGA 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1179 TTGAGAAAATCATTTCCGGTATGTACTTGGGAGAGATTTTGCGAAGAGTTCTTCTAAAGA 1238
Query 1021 TGGCTGAAGATGCTGCTTTCTTTGGCGATACCGTCCCATCTAAGCTGAGAATACCATTCA 1080
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1239 TGGCTGAAGATGCTGCTTTCTTTGGCGATACAGTCCCATCTAAGCTGAGAATACCATTCA 1298
Query 1081 TCATTAGGACCCCTCACATGTCGGCTATGCACAACGACACTTCTCCAGACTTGAAGATTG 1140
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1299 TCATTAGGACTCCTCACATGTCGGCTATGCACAACGACACTTCTCCAGACTTGAAGATTG 1358
Query 1141 TAGGGAGCAAGATTAAGGATATATTGGAGGTCCCTACAACTTCTCTGAAAATGAGAAAAG 1200
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1359 TTGGGAGCAAGATTAAGGATATATTGGAGGTCCCTACAACTTCTCTGAAAATGAGAAAAG 1418
Query 1201 TTGTGATCAGTCTCTGCAACATCATAGCAACCCGAGGCGCTCGTCTCTCTGCTGCTGGAA 1260
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1419 TTGTGATCAGTCTCTGCAACATCATAGCAACCCGAGGAGCTCGTCTCTCTGCTGCTGGAA 1478
Query 1261 TCTATGGTATCCTGAAGAAACTGGGAAGAGATACGACCAAAGACGAGGAGATGCAGAAAT 1320
|||||||||| ||||||||||||||||||||||| || |||||||||||| |||||||||
Sbjct 1479 TCTATGGTATTCTGAAGAAACTGGGAAGAGATACTACTAAAGACGAGGAGGTGCAGAAAT 1538
Query 1321 CGGTTATAGCCATGGATGGTGGATTGTTTGAGCATTACACTCAGTTTAGTGAGTGTATGG 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1539 CGGTTATAGCCATGGATGGTGGATTGTTTGAGCATTACACTCAGTTTAGTGAGTGTATGG 1598
Query 1381 AGAGCTCACTAAAAGAGTTGCTTGGAGATGAAGCTTCAGGAAGCATTGAAGTCACTCACT 1440
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1599 AGAGCTCACTAAAAGAGTTGCTTGGAGATGAAGCTTCAGGAAGCGTTGAAGTCACTCACT 1658
Query 1441 CCAATGATGGATCAGGCATTGGAGCTGCGCTTCTTGCAGCTTCTCACTCTCTGTACCTTG 1500
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 1659 CCAATGATGGATCAGGCATTGGAGCTGCGCTTCTTGCTGCTTCTCACTCTCTCTACCTTG 1718
Query 1501 AAGACTCTTAAAACCTTCCCAAAGAGCGCCAT 1532
|||||||||||||||| |||||||||||||||
Sbjct 1719 AAGACTCTTAAAACCTACCCAAAGAGCGCCAT 1750
> AT2G19860.1 | Symbols: ATHXK2, HXK2 | hexokinase 2 | chr2:8570750-8574000
FORWARD LENGTH=1815
Length=1815
Score = 1332 bits (721), Expect = 0.0
Identities = 1255/1511 (83%), Gaps = 43/1511 (3%)
Strand=Plus/Plus
Query 14 GGAGAAA-ATGGGTAAAGTAGCTGTTGGAGCGACGGTTGTTTGCACGGCGGCGGTTTGTG 72
||||||| ||||||||||| || |||| | ||||||| || || ||| |||||| ||||
Sbjct 61 GGAGAAAGATGGGTAAAGTGGCAGTTGCAACGACGGTAGTGTGTTCGGTGGCGGTATGTG 120
Query 73 CGGTGGCTGTTTTGGTTGTTC-GACGACGGATGCAGAGCTCAGGGAAGTGGGGACGTGTT 131
||| ||| | ||| | || | || || | ||| | ||| ||||||| |||| | | ||
Sbjct 121 CGGCGGCGGCGTTGATAGTACGGAGGA-GAATGAAAAGCGCAGGGAAATGGGCAAGAGTG 179
Query 132 TTGGCCATCCTT-AAGGCTTTTGAAGAGGATTGTGCGACTCCGATCT-CGAAACTGAGAC 189
| | || || || || |||||||| |||||||| || || || | | ||| ||||||
Sbjct 180 ATAGAGAT-ATTGAAAGCCTTTGAAGAAGATTGTGCAACGCCAAT-TGCCAAATTGAGAC 237
Query 190 AAGTGGCTGATGCTATGACCGTTGAGATGCATGCTGGTCTTGCATCCGACGGTGGTAGCA 249
||||||||||||||||||| ||||||||||||||||||||||| || || ||||| ||||
Sbjct 238 AAGTGGCTGATGCTATGACTGTTGAGATGCATGCTGGTCTTGCTTCTGAAGGTGGCAGCA 297
Query 250 AACTCAAAATGCTTATCAGCTACGTTGATAATCTTCCTTCTGGGGATGAAAAGGGTCTCT 309
| || || |||||||| |||||||||||||||||||||||||||||||| | ||| | |
Sbjct 298 AGCTTAAGATGCTTATTAGCTACGTTGATAATCTTCCTTCTGGGGATGAGACTGGT-TTT 356
Query 310 TT-TATGCATTGGACCTAGGTGGAACAAACTTCCGTGTCATGCGTGTGCTTCTTGGCGGG 368
|| ||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||| |||
Sbjct 357 TTCTATGCGTTGGATCTAGGCGGAACAAACTTCCGTGTTATGCGTGTGCTTCTTGGTGGG 416
Query 369 AAGCAAGAGCGTGTTGTTAAACAAGAATTCGAAGAAGTTTCGATTCCTCCCCATTTGATG 428
||||| || ||||||||||||| ||||||| |||||| || |||||||| |||||||||
Sbjct 417 AAGCACGACCGTGTTGTTAAACGAGAATTCAAAGAAGAATCTATTCCTCCTCATTTGATG 476
Query 429 A-CTGGTGGTTCAGATGAATTGTTCAATTTTATCGCTGAAGCTCTTGCGAAGTTTGTCGC 487
| | || | ||| ||||||| ||| ||||||||| ||| | |||||| |||||||||||
Sbjct 477 ACCGGGAAG-TCACATGAATTATTCGATTTTATCGTTGATGTTCTTGCCAAGTTTGTCGC 535
Query 488 CACAGAATGCGAAGACTTTCATCTCCCGGAAGGTAGACAGA-GGGAATTAGGCTTCACTT 546
|||||| |||| |||||||||||||| |||||||| | ||||| |||| || ||||
Sbjct 536 TACAGAAGGCGAGGACTTTCATCTCCCACCTGGTAGACA-ACGGGAACTAGGTTTTACTT 594
Query 547 TCTCGTTTCCGGTTAAGCAGACT-TCTTTATCCTCTGGTAGTCTCATCAAATGGACAAAA 605
|||| ||||||||||||||| || |||||||||||||| | ||||||||| ||||| ||
Sbjct 595 TCTCATTTCCGGTTAAGCAG-CTATCTTTATCCTCTGGCACTCTCATCAACTGGACGAAG 653
Query 606 GGCTTTTCCATCGAAGA-AGCAGTTGGA-CAAGATGTTGTTGGAGCACTTAATAAGGCTA 663
||||||||||| || || | ||||| || ||||||||||||||| |||| ||| ||||
Sbjct 654 GGCTTTTCCATTGACGATA-CAGTT-GATAAAGATGTTGTTGGAGAACTTGTTAAAGCTA 711
Query 664 TGGAAAGAGTTGGGCTTGACATGCGAATCGCAGCACTTGTTAATGATACCGTTGGAACAC 723
|||||||||||||||| ||||||| ||||||| ||||||||||||||| |||||||||
Sbjct 712 TGGAAAGAGTTGGGCTGGACATGCTTGTCGCAGCGCTTGTTAATGATACCATTGGAACAC 771
Query 724 TAGCTGGTGGTAGATACTA-TAACCAGGATGTTGTTGCT-GCTGTTATTTTAGGCACTGG 781
| || |||||||||||| | ||||| |||||| |||| | || |||||||| ||||| ||
Sbjct 772 TTGCGGGTGGTAGATAC-ACTAACCCGGATGTCGTTG-TCGCAGTTATTTTGGGCACCGG 829
Query 782 GACAAACGCAGCCTATGTTGAGCGTGCAAC-GGCGATCCCCAAATGGCATGGTCCGCT-T 839
||||| ||||||||||| || ||||| || || || ||||||||||||||| |||
Sbjct 830 CACAAATGCAGCCTATGTCGAACGTGC-ACATGCAATTCCCAAATGGCATGGTTTGCTAC 888
Query 840 CCAAACTCAGGAGAAATGGTTATAAACATGGAATGGGGAAACTTCAGGTCATCACATCTC 899
||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 889 CCAAA-TCAGGAGAAATGGTGATCAACATGGAATGGGGAAACTTCAGGTCATCACATCTT 947
Query 900 CCATTAACAGAGTTTGATCACTCGCTGGATTTCGAGAGTCTGAATCCAGGCGAACAGATT 959
||||| ||||||| || ||||| || ||| |||| ||| ||||||| || |||||||||
Sbjct 948 CCATTGACAGAGTACGACCACTCTCTAGATGTCGATAGTTTGAATCCTGGTGAACAGATT 1007
Query 960 CTTGAGAAAATCATTTCCGGTATGTA-CTTGGGAGAGATTTTGCGAAGAGTTCTTCTAAA 1018
|||||||||||||||||||| ||||| || |||||| || ||||| ||||||||||| ||
Sbjct 1008 CTTGAGAAAATCATTTCCGGAATGTATCT-GGGAGAAATCTTGCGTAGAGTTCTTCTGAA 1066
Query 1019 GATGGCTGAAGATGCTGCTTTCTTTGGCGATACCGTCCCATCTAAGCTGAGAATACCATT 1078
|||||||||||| ||||| ||||||||||||| ||||||| ||||||||| |||||||||
Sbjct 1067 GATGGCTGAAGAAGCTGCCTTCTTTGGCGATATCGTCCCACCTAAGCTGAAAATACCATT 1126
Query 1079 CATCATTAGGACCCCTCACATGTCGGCTATGCACAACGACACTTCTCCAGACTTGAAGAT 1138
|||||| |||||||| ||||||| |||||||||| || ||||| || || |||||| |
Sbjct 1127 CATCATAAGGACCCCGAACATGTCTGCTATGCACAGTGATACTTCCCCGGATTTGAAGGT 1186
Query 1139 TGTAGGGAGCAAGATTAAG-GATATATTGGAGGTCCCTACAACTTCTCTGAAAATGAGAA 1197
|||||| |||||| |||| || ||||||||||||| || | ||||||||| ||||| |
Sbjct 1187 TGTAGGAAGCAAG-TTAAAAGACATATTGGAGGTCCAGACTAGTTCTCTGAAGATGAGGA 1245
Query 1198 AAGTTGTGATCAGTCTCTGCAACATCATAGCAACCCGAGGCGCTCGTCTCTCTGCTGCTG 1257
||||||||||||| || || |||||||| |||| |||||| |||||| | |||||||| |
Sbjct 1246 AAGTTGTGATCAGCCTATGTAACATCATTGCAAGCCGAGGAGCTCGTTTATCTGCTGCGG 1305
Query 1258 GAATCTATGGTATCCTGAAGAAACTGGGAAGAGATACGACCAAAGACG-AGGAGATGCAG 1316
| |||||||| ||||| |||||| | |||||||| | || ||||| | || || | |||
Sbjct 1306 GGATCTATGGAATCCTCAAGAAAATAGGAAGAGACGCAACAAAAGATGGAGAAGCT-CAG 1364
Query 1317 AAATCGGTTATAGCCATGGATGGTGGATTGTTTGAGCATTACACTCAGTTTAGTGAGT-G 1375
||||| || ||||| ||||| ||||| | || ||||||||||||||||| ||||||| |
Sbjct 1365 AAATCTGTGATAGCGATGGACGGTGGGCTATTCGAGCATTACACTCAGTTCAGTGAGTCG 1424
Query 1376 TATGGAGAGCTCACTAAAAGAGTTGCTTGGAGATGAAGCTTCAG-GAAGCATTGAAGTCA 1434
||| |||| ||| | |||||||||||||||||||||| ||||| || | ||||||| |
Sbjct 1425 -ATGAAGAGTTCATTGAAAGAGTTGCTTGGAGATGAAGTTTCAGAGA-GTGTTGAAGTGA 1482
Query 1435 CTCACTC-C-AATGATGGATCAGGCATTGGAGCTGCGCTT-CTTGCAGCTTCTCACTCTC 1491
| ||| | |||||||| ||||| |||||||||| || ||||| |||||||||||||
Sbjct 1483 -T-ACTGTCGAATGATGGTTCAGGTGTTGGAGCTGCA-TTACTTGCTGCTTCTCACTCTC 1539
Query 1492 TGTACCTTGAA 1502
||| || |||
Sbjct 1540 AGTATCTCGAA 1550
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75602020770
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5