BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg945405 Length=1728 Score E Sequences producing significant alignments: (Bits) Value AT4G26640.2 | Symbols: WRKY20, AtWRKY20 | WRKY family transcrip... 2826 0.0 > AT4G26640.2 | Symbols: WRKY20, AtWRKY20 | WRKY family transcription factor family protein | chr4:13437071-13440835 REVERSE LENGTH=2043 Length=2043 Score = 2826 bits (1530), Expect = 0.0 Identities = 1667/1731 (96%), Gaps = 18/1731 (1%) Strand=Plus/Plus Query 1 TACCCTTGCGATTCTCTGAAATGAACCCTCAAGCTAATGACCGGAAGGAGTTTCAGGGAG 60 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 TACCCTTGCGAATCTCTGAAATGAACCCTCAAGCTAATGACCGGAAGGAGTTTCAGGGAG 182 Query 61 ATTGCTCGGCGACGGGAGATCTCACGGCAAGGCACGATTCAGCTGGAGGAGGAGGAAATG 120 |||| ||||||||||||||||||||||||| ||||||||||||| |||||||| | Sbjct 183 ATTGTTCGGCGACGGGAGATCTCACGGCAAAGCACGATTCAGCT------GGAGGAAACG 236 Query 121 GAGGTGGAGGTGCTAGGTATAAGCTGATGTCACCGGCGAAGCTTCCGATCTCGAGGTCGA 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 237 GAGGTGGAGGTGCTAGGTATAAGCTGATGTCACCGGCCAAGCTTCCGATCTCGAGGTCGA 296 Query 181 CTGATATCACGATTCCTCCTGGGTTGAGTCCGACTTCGTTTTTGGAATCTCCTGTTTTCA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 297 CTGATATCACGATTCCTCCTGGGTTGAGTCCGACTTCGTTTTTGGAATCTCCTGTTTTCA 356 Query 241 TCTCCAACATCAAGCCAGAACCTTCCCCTACTACTGGTTCTTTGTTCAAGCCTCGACCAG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 357 TCTCCAACATCAAGCCAGAACCTTCCCCTACTACTGGTTCTTTGTTCAAGCCTCGACCAG 416 Query 301 TGCACATTTCTGCTAGCTCAAGTTCTTATACAGGTAGGGCGTTCCATCAGAACACCTTTA 360 |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct 417 TGCACATTTCTGCTAGCTCAAGTTCTTATACAGGCAGGGGGTTCCATCAGAACACCTTTA 476 Query 361 CTGAGCAGAAGTCCAGTGAATTTGAGTTCAGACCTCCTGCATCCAATATGGTTTATGCAG 420 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 477 CTGAGCAGAAGTCCAGTGAATTTGAGTTCAGACCTCCTGCATCAAATATGGTATATGCAG 536 Query 421 AGCTTGGCAAGCAT-AGAAGTGAGCCACCGGTACAATTTCAAGGCCAGGGCCATGGATCC 479 ||||||||||| || |||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 537 AGCTTGGCAAG-ATTAGAAGTGAGCCACCAGTACATTTTCAAGGCCAGGGCCATGGATCC 595 Query 480 GCACACTCACCTTCTTC-ACTCAGTGATGCTGCAGGTTCCTCAAGTGAGCTAAGCCGGCC 538 |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 596 TCACACTCACCTTCTTCGA-TCAGTGATGCTGCAGGTTCCTCAAGTGAGCTAAGCCGGCC 654 Query 539 AACTCCTCCTCGTCAGATGACACCAACGAGCTCAGATATTCCGGCTGGATCTGATCAAGA 598 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 655 AACTCCTCCTTGTCAGATGACACCAACGAGCTCAGATATTCCGGCTGGATCTGATCAAGA 714 Query 599 GGAATCAATCCAGACTTCCCAAAATGACCCCAGAGGAAGCACACCATCCATCTTGGCTGA 658 |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 715 GGAATCAATCCAGACTTCCCAAAATGACTCCAGAGGAAGCACTCCATCCATCTTGGCTGA 774 Query 659 TGATGGTTATAACTGGAGAAAATATGGTCAAAAACATGTCAAAGGGAGTGAATTTCCCCG 718 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 775 TGATGGTTATAACTGGAGAAAATATGGTCAAAAGCATGTCAAAGGGAGTGAATTTCCCCG 834 Query 719 GAGCTATTATAAATGTACACATCCTAATTGTGAAGTGAAAAAGTTATTTGAAAGATCTCA 778 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 835 GAGCTATTATAAATGTACACATCCTAATTGTGAAGTGAAAAAGTTATTTGAAAGATCTCA 894 Query 779 TGATGGGCAGATCACCGATATTATATACAAGGGTACACATGACCATCCTAAACCTCAACC 838 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 895 TGATGGGCAGATCACCGATATTATATACAAGGGTACACATGACCATCCTAAACCTCAACC 954 Query 839 TGGTCGCCGAAACTCTGGTGGTCTTGGTATGGCTGCACAAGAAGAAAGGCTAGACAAGTA 898 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 955 TGGTCGCCGAAACTCTGGTGGT------ATGGCTGCACAAGAAGAAAGGCTAGACAAGTA 1008 Query 899 TCCTTCTTCAACTGGCCGAGATGAGAAGGGATCTGGCGCCTACAACTTGTCTCACCCCAA 958 |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct 1009 TCCTTCTTCAACTGGCCGAGATGAGAAGGGATCTGGCGTCTACAACTTGTCTAACCCCAA 1068 Query 959 TGAGCAAACTGGTAACCCTGAAATACCTCCTGTCTCAGCATCTGAGGATGGTGGAGAAGC 1018 ||| |||||||||||||||||| |||||||| ||||||||||||| |||||||||||||| Sbjct 1069 TGAACAAACTGGTAACCCTGAAGTACCTCCTATCTCAGCATCTGACGATGGTGGAGAAGC 1128 Query 1019 TGCAGCGTCAAATAGGAATAAAGATGAGCCGGACGATGATGATCCATTCTCAAAACGGAG 1078 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1129 GGCAGCGTCAAATAGGAATAAAGATGAGCCGGACGATGATGATCCATTCTCAAAACGGAG 1188 Query 1079 GAGGATGGATGGTGCGATGGAAATAACTCCACTTGTGAAACCCATCCGAGAGCCTCGGGT 1138 ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 1189 GAGGATGGAGGGTGCGATGGAAATAACTCCACTAGTGAAACCCATCCGGGAGCCTCGGGT 1248 Query 1139 TGTTGTTCAAACTCTGAGTGAGGTTGACATACTGGATGATGGTTATAGATGGCGTAAATA 1198 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 1249 TGTTGTTCAAACTCTGAGTGAGGTTGACATTCTGGATGATGGTTATAGATGGCGCAAATA 1308 Query 1199 TGGGCAGAAAGTCGTAAGGGGGAACCCAAATCCCAGGAGCTATTACAAATGCACAGCTCC 1258 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1309 TGGGCAGAAAGTCGTAAGGGGGAACCCAAATCCCAGGAGCTACTACAAATGCACAGCTCA 1368 Query 1259 TA-ATTGCCAAGTGAGAAAACACGTGGAGAGGGCATCACATGACCCAAAAGCTGTAATAA 1317 | || ||| ||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 1369 TGGAT-GCCCAGTGAGAAAACACGTGGAGAGAGCATCACATGATCCAAAAGCTGTAATAA 1427 Query 1318 CAACATACGAAGGCAAACACGATCACGATGTTCCCACTTCAAAGTCTAGCAGCAATCACG 1377 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1428 CAACATACGAAGGCAAACACGATCATGATGTTCCCACTTCAAAGTCTAGCAGCAATCACG 1487 Query 1378 ACATCCAGCCTCGGTTCAGACCAGATGAAACAGACACCATCAGCCTCAATCTTGGTGTTG 1437 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1488 AAATCCAGCCTCGGTTCAGACCAGATGAAACAGACACCATCAGCCTCAATCTTGGTGTTG 1547 Query 1438 GAATCTCATCTGATGGACCTAACCACGCTTCCAACGAGCATCAGCATCAGAATCAACAAC 1497 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 1548 GAATCTCATCTGATGGACCTAACCACGCTTCCAACGAACATCAGCACCAGAATCAACAAC 1607 Query 1498 TCGTCAACCAAACTCACCCAAATGGAGTCAATTTCAGGTTTGTTCATGCTAGTCCCATGT 1557 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1608 TTGTCAACCAAACTCACCCAAATGGAGTCAATTTCAGGTTTGTTCATGCTAGTCCCATGT 1667 Query 1558 CATCCTACTATGCTAGCTTAAATAGCGGTATGAATCAGTACGGCCAGAGAGAAACAAAGA 1617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1668 CATCCTACTATGCTAGCTTAAATAGCGGTATGAATCAGTACGGCCAGAGAGAAACAAAGA 1727 Query 1618 ACGAGACTCAGAATGGCGACATCTCGTCCTTGAACAATTCATCTTACCCATATCCGCCCA 1677 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1728 ACGAGACTCAAAATGGTGACATCTCGTCCTTGAACAATTCATCTTACCCATATCCGCCCA 1787 Query 1678 ACATAGGGAGAATACAATCGGGTCCTTAAAAGAAAAAGTAAGCAACAGTAT 1728 |||| |||||| ||||||||||||| ||||| ||||||||||||||| ||| Sbjct 1788 ACATGGGGAGAGTACAATCGGGTCCGTAAAACAAAAAGTAAGCAACATTAT 1838 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85441327590 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5