BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg945603 Length=453 Score E Sequences producing significant alignments: (Bits) Value AT4G24960.1 | Symbols: ATHVA22D, HVA22D | HVA22 homologue D | c... 688 0.0 > AT4G24960.1 | Symbols: ATHVA22D, HVA22D | HVA22 homologue D | chr4:12827937-12829243 FORWARD LENGTH=792 Length=792 Score = 688 bits (372), Expect = 0.0 Identities = 426/452 (94%), Gaps = 4/452 (1%) Strand=Plus/Plus Query 3 TTGCAAAGGAAGaaaaa-aaTGGACAACAAATTTTGGACTTTCCTCACTGCTCTTCATTC 61 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 105 TTGCAAAGGAAGAAAAACAATGG---ACAAATTTTGGACTTTCCTCACTGCTCTTCATTC 161 Query 62 AGGCGCTGGGCCCATAGTGATGTTGCTGTATCCATTGTACGCATCGGTGATAGCAATGGA 121 |||||||||||| || |||||||| || |||||||||||||||||||||||||||||||| Sbjct 162 AGGCGCTGGGCCTATCGTGATGTTACTTTATCCATTGTACGCATCGGTGATAGCAATGGA 221 Query 122 GAGCACAACAAAAGTTGACGATGAACAGTGGCTCGCGTACTGGATAATATACTCCTTCCT 181 ||||||||||||||| ||||||||||||||||| ||||| ||||||||||| || ||||| Sbjct 222 GAGCACAACAAAAGTGGACGATGAACAGTGGCTTGCGTATTGGATAATATATTCGTTCCT 281 Query 182 TTCACTCACGGAACTGATTCTGCAATCGCTTATTGAGTGGATTCCGATTTGGTATACGGT 241 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 282 CTCACTCACGGAACTGATTCTGCAATCGCTTATTGAGTGGATTCCGATTTGGTATACGGT 341 Query 242 GAAACTTGTGTTCGTGGCTTGGCTTGTTCTGCCGCAGTTTCAAGGCGCAGCTTTTATCTA 301 |||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct 342 GAAACTTGTGTTCGTGGCTTGGCTAGTTCTTCCTCAGTTTCAAGGCGCAGCTTTTATCTA 401 Query 302 CAACCGTGTGGTTAGAGAACAGTTCAAGAAACACGGCGTCCTCCGCTCCTCCCACTCCAA 361 ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 402 CAACCGTGTTGTTAGAGAACAGTTCAAGAAACACGGCGTCCTCCGCTCCACCCACTCCAA 461 Query 362 GGCCACCAAGCCCAATATCCTCCAGTCCATTTTCCCCAACCGGGAGGGACAGGAGGCTCA 421 | ||||||||||||| |||||||| |||||||||||| ||||||||||||| |||||||| Sbjct 462 GCCCACCAAGCCCAACATCCTCCACTCCATTTTCCCCCACCGGGAGGGACACGAGGCTCA 521 Query 422 CAGTCACTGAATCAGAAGAGAGGAGCAGACAG 453 |||||||||||||||||| | ||||||||||| Sbjct 522 CAGTCACTGAATCAGAAGGGTGGAGCAGACAG 553 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21564864321 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5