BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg945746 Length=2371 Score E Sequences producing significant alignments: (Bits) Value AT4G23640.1 | Symbols: TRH1, ATKT3, KUP4 | Potassium transporte... 3886 0.0 > AT4G23640.1 | Symbols: TRH1, ATKT3, KUP4 | Potassium transporter family protein | chr4:12320152-12324486 REVERSE LENGTH=2847 Length=2847 Score = 3886 bits (2104), Expect = 0.0 Identities = 2277/2363 (96%), Gaps = 2/2363 (0%) Strand=Plus/Plus Query 1 TTACTCGCCGGCGGCTTAAATCATGGCTGATAGGAGAAACAGGTGTAACCAGATCCTCCT 60 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 174 TTACTCGCCGGCGGCTTGAATCATGGCTGATAGGAGAAACAGGTGTAACCAGATCCTCCT 233 Query 61 TTTAGCATATCAGAGTTTTGGCTTAGTGTTTGGAGATTTGAGTATTTCTCCTCTCTACGT 120 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 234 TTTAGCATACCAGAGTTTTGGCTTAGTGTTTGGAGATTTGAGTATTTCTCCTCTCTATGT 293 Query 121 GTATAAATGTACTTTCTACGGAGGATTGAAACATCACCAAACAGAAGATACCATATTTGG 180 |||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct 294 GTATAAATGTACATTCTACGGAGGATTGAGACATCACCAAACAGAAGATACGATATTTGG 353 Query 181 CGCCTTTTCTTTGATATTTTGGACCATCACTCTCCTTTCACTCATCAAGTACATGGTTTT 240 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 354 CGCGTTTTCTTTGATATTTTGGACCATCACTCTCCTTTCACTCATCAAGTACATGGTTTT 413 Query 241 TGTATTAAGTGCAGATGACAATGGTGAAGGAGGGATCTTTGCTTTGTATGCTTTGCTCTG 300 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 414 TGTGTTAAGTGCAGATGACAATGGTGAAGGAGGGATCTTTGCTTTGTATGCTTTGCTCTG 473 Query 301 CAGACACGCTAGATTTTCTTTGCTTCCCAATCAGCAAGCTGCTGATGAAGAAATCTCCAC 360 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 474 CAGACACGCAAGATTTTCTTTGCTTCCAAATCAGCAAGCTGCTGATGAAGAAATCTCTAC 533 Query 361 ATACTATGGCCCTGGAGATGCAAGTAGAAATTTGCCTGGTTCTGCTTTCAAAAGCCTTAT 420 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 534 ATACTATGGTCCTGGAGATGCAAGTAGAAATTTGCCTAGTTCTGCTTTCAAAAGCCTTAT 593 Query 421 AGAACGAAATAAAAGATCAAAAACTGCTTTGCTTGTTTTAGTCTTGGTAGGAACTTCCAT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 594 AGAACGAAATAAAAGATCAAAAACTGCTTTGCTTGTTTTAGTCTTGGTAGGAACTTCCAT 653 Query 481 GGTAATAACCATCGGTGTCCTTACACCAGCAATTTCAGTCTCTTCGTCTATTGATGGCCT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 654 GGTAATAACCATCGGTGTCCTTACACCAGCAATTTCAGTCTCTTCGTCTATTGATGGCCT 713 Query 541 TGTGGCCAAGACAAGTCTGAAGCATAGTACTGTGGTCATGATAGCATGCGCTTTACTGGT 600 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 714 TGTGGCCAAGACAAGTCTGAAGCACAGTACTGTGGTCATGATAGCATGCGCTTTACTGGT 773 Query 601 TGGACTTTTCGTTCTGCAGCACCGTGGCACCAATAAAGTTGCCTTTCTCTTTGCACCTAT 660 ||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| Sbjct 774 TGGACTTTTTGTTCTGCAGCACCGTGGGACAAATAAAGTTGCCTTTCTATTTGCACCTAT 833 Query 661 AATGATTTTGTGGTTGTTGATAATTGCAACTGTTGGTGTGTACAATATTGTGACTTGGAA 720 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 834 AATGATTTTGTGGTTGTTGATAATTGCAACTGCTGGTGTGTACAATATTGTGACTTGGAA 893 Query 721 CCCCAGTGTATACAAAGCCTTATCTCCCTACTACATCTATGTATTCTTTAGAGACACTGG 780 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || || Sbjct 894 CCCCAGTGTATACAAAGCCTTATCTCCCTACTATATCTATGTATTCTTTAGAGATACGGG 953 Query 781 AATAGATGGATGGCTATCCCTTGGAGGCATTCTTTTATGCATTACAGGAACGGAGGCTAT 840 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 954 AATAGATGGATGGCTATCCCTTGGAGGCATTCTTTTATGCATCACAGGAACGGAGGCTAT 1013 Query 841 CTTTGCTGAACTTGGCCAATTTACAGCCACATCTATAAGGTTTGCGTTTTGTTGTGTTGT 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1014 CTTTGCTGAACTTGGCCAATTTACAGCCACATCTATAAGGTTTGCGTTTTGTTGTGTTGT 1073 Query 901 TTACCCGTGTCTGGTGCTTCAATACATGGGCCAAGCTGCGTTTTTATCAAAGAATTTTTC 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1074 TTACCCGTGTCTGGTGCTTCAATACATGGGCCAAGCTGCGTTTTTATCAAAGAATTTTTC 1133 Query 961 TGCTCTACCTTCAAGCTTTTATTCTTCCATTCCAGACCCATTTTTCTGGCCGGTTCTCAT 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1134 TGCTCTACCTTCAAGCTTTTATTCTTCCATTCCAGACCCATTTTTCTGGCCGGTTCTCAT 1193 Query 1021 GATGGCTATGCTGGCTGCAATGGTCGCAAGCCAAGCAGTCATATTTGCCACGTTCTCAAT 1080 |||||||||||| |||||||||||||| || |||||||||||||||||||||||||| || Sbjct 1194 GATGGCTATGCTAGCTGCAATGGTCGCTAGTCAAGCAGTCATATTTGCCACGTTCTCGAT 1253 Query 1081 TGTCAAACAATGCTATGCATTGGGATGCTTCCCGCGCGTGAAGATTGTTCACAAACCAAG 1140 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1254 TGTCAAACAATGCTATGCATTGGGATGCTTCCCGCGTGTGAAGATTGTTCACAAACCAAG 1313 Query 1141 ATGGGTCCTTGGCCAAATTTACATCCCTGAGATCAATTGGGTTGTCATGATCCTCACCCT 1200 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1314 ATGGGTCCTTGGCCAGATTTACATCCCTGAGATCAATTGGGTTGTCATGATCCTCACCCT 1373 Query 1201 CACTGTCACCATTTGTTTCCAAGACACTCGACACATAGCTTTTGCTTTTGGGCTCGCCTG 1260 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1374 TGCTGTCACCATTTGTTTCCGAGACACTCGACACATAGCTTTTGCTTTTGGGCTCGCCTG 1433 Query 1261 CATGACTCTAGCCTTTGTGACAACTTGGTTGATGCCTCTCATTATCAACTTTGTCTGGAA 1320 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 1434 CATGACTCTAGCCTTTGTGACTACTTGGTTGATGCCTCTCATCATCAACTTTGTCTGGAA 1493 Query 1321 CCGTAATATCGTCTTCTCCGTCCTCTTCATCCTCTTCTTCGGGACCATAGAACTTGTCTT 1380 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1494 CCGTAATATCGTCTTCTCCGTCCTCTTCATCCTCTTCTTCGGGACCATAGAACTTATCTT 1553 Query 1381 CGTTGCATCAGCCTTAGTCAAAATTCCTAAAGGAGGCTGGATCACTCTCCTCCTTTCCCT 1440 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 1554 CGTTGCATCAGCCTTAGTCAAAATCCCTAAAGGAGGCTGGATCACTCTGCTCCTTTCCCT 1613 Query 1441 CTTCTTCACCTTCATCACATATGTATGGCATTACGGCAGCAGAAAGAAATACCTGTGCGA 1500 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct 1614 CTTCTTCACCTTCATCACATACGTATGGCATTACGGCAGCAGAAAGAAGTACCTATGCGA 1673 Query 1501 CCAGCACAACAAGGTCCCTATGAAATCAATCCTAAGCCTTGGCCCGAGCCTTGGGATCAT 1560 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 1674 CCAGCACAACAAGGTCCCTATGAAATCAATACTAAGCCTTGGCCCGAGCCTCGGGATCAT 1733 Query 1561 CAAAGTCCCTGGGATGGGTCTTATCTACACCGAGCTCGCCAGCGGTGTTCCCGCCACATT 1620 ||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 1734 CAAAGTCCCCGGGATGGGTCTTATCTACACAGAGCTCGCCAGCGGTGTTCCTGCCACATT 1793 Query 1621 TACTCACTTTCTAACAAACTTACCGGCGTTCTACCAAGTTGTCGTCTTTGTCTGCTGCAA 1680 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1794 TAAGCACTTTCTAACAAACTTACCGGCGTTCTACCAAGTTGTCGTCTTTGTCTGCTGCAA 1853 Query 1681 AACTGTCCCTATCCCGTATGTGCCGCAGAAAGAACGGTACCTTATCGGCCGGATTGGACC 1740 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1854 AACTGTCCCTATCCCGTATGTGCCGCAGAAAGAACGGTACCTTATCGGCCGGATTGGACC 1913 Query 1741 GAAAACATACAGGATGTACCGATGCATTATCCGAGCCGGTTACAAAGACGTGAACAAAGA 1800 ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 1914 AAAAACATACAGGATGTACCGATGCATTATCCGAGCTGGCTACAAAGACGTGAACAAAGA 1973 Query 1801 CGGAGATGACTTTGAAGACGAGCTGGTGATGAGCATTGCCGAGTTTATCCAGCTAGAATC 1860 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1974 CGGAGACGACTTTGAAGACGAGCTGGTGATGAGCATCGCCGAGTTTATCCAGCTAGAATC 2033 Query 1861 TGAAGGCTACGGTGGCTCAAACACTGACCGTTCGATTGATGGTCGGCTCGCTGTTGTGAA 1920 |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2034 CGAAGGCTATGGTGGCTCAAACACTGACCGTTCGATTGACGGTCGGCTCGCTGTTGTGAA 2093 Query 1921 AGCCTCAAACAAGTTTGGGACAAGGCTGTCTCGGTCTATATCCGAGGCCAACATTGCAGG 1980 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 2094 AGCCTCAAACAAGTTTGGGACAAGGCTGTCTCGGTCTATATCCGAAGCCAACATCGCAGG 2153 Query 1981 CAGCTCAAGATCACAGACAACAGTAACAAACAGCAAATCTCCGGCTCTACTTAGACTGAG 2040 |||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct 2154 CAGCTCGAGATCACAGACAACAGTAACAAACAGCAAGTCTCCGGCTCTACTTAAACTGAG 2213 Query 2041 AGCAGAGTATGAGCAAGAGCTTCCGAGACTGAGCATGAGAAGGATGTTTCAGTTCAGACC 2100 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2214 AGCAGAGTATGAGCAAGAGCTTCCGAGGCTGAGCATGAGAAGGATGTTTCAGTTCAGACC 2273 Query 2101 AATGGACACTAAATTCAGGCAACCACAGGTGAAGGAGGAGCTCTTTGATCTGGTGAACGC 2160 ||||||||| || ||||||||||| ||||||||||| ||||| |||||||||||||| || Sbjct 2274 AATGGACACCAAGTTCAGGCAACCGCAGGTGAAGGAAGAGCTGTTTGATCTGGTGAATGC 2333 Query 2161 TAAGGACGCAGAAGTGGCATACATTGTTGGACACGGTCACGTGAAGGCGAAGCGCAACTC 2220 ||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| ||||| Sbjct 2334 TAAGGACGCTGAAGTGGCTTACATTGTCGGACACGGTCACGTGAAGGCAAAGCGGAACTC 2393 Query 2221 GGTATTTGTGAAAC-GTTTGGTCATAAACGTGGCTTACTCGTTCTTGAGGAAGAATTGCA 2279 || ||||| |||| | | ||| ||||||| || |||||||||||||||||||||||| Sbjct 2394 AGTGTTTGTAAAACAGCT-GGTGGTAAACGTAGCGTACTCGTTCTTGAGGAAGAATTGCC 2452 Query 2280 GAAGCCCAGGCGTGATGTTAAATATTCCTCACATTTGTTTGATCAAAGTGGGCATGAACT 2339 | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2453 GGAGCCCAGGCGTGATGTTGAATATTCCTCACATTTGTTTGATCAAAGTGGGCATGAACT 2512 Query 2340 ATTACTTGTAACTGAGAGTTTTT 2362 ||||||||||| ||||||||||| Sbjct 2513 ATTACTTGTAAGTGAGAGTTTTT 2535 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 117720278025 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5