BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg945914 Length=1060 Score E Sequences producing significant alignments: (Bits) Value AT4G22190.1 | Symbols: | unknown protein; Has 283 Blast hits t... 1698 0.0 > AT4G22190.1 | Symbols: | unknown protein; Has 283 Blast hits to 154 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 12; Plants - 48; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). | chr4:11741855-11743318 REVERSE LENGTH=1464 Length=1464 Score = 1698 bits (919), Expect = 0.0 Identities = 1021/1068 (96%), Gaps = 15/1068 (1%) Strand=Plus/Plus Query 2 ctctctctctctctACTCT-G-CAACAATGGATAGTCCGACGAGCATACGTAGTAAACCA 59 |||||||||||||| || | | |||||||||||||||||||||||||||||||||||||| Sbjct 172 CTCTCTCTCTCTCT-CTGTCGTCAACAATGGATAGTCCGACGAGCATACGTAGTAAACCA 230 Query 60 CCACCGGAGACTCTTTCTCCATGCGGTAGCCAACGACGGAGAAGCAGCTGCGACTCTAAC 119 | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 231 CTACCGGAGACTCTTTCTCCATGCGGTAGTCAACGACGGAGAAGCAGCTGCGACTCTAAC 290 Query 120 CCACCTGAGTTCGAGTTCTGGCGTCTCACTAACTCTTCATTTCCTCAAGCTGACTCAGAT 179 |||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| Sbjct 291 CCACCTGAGTTCGAGTTCTGGCGTTTAACTAACTCTTCATTTCCTCAAGCTGATTCAGAT 350 Query 180 CTCCTCTCCGCTGACGAGCTTTTTCACGACGGTGTTCTTCTCCCTCTTCACCTCCTCTCC 239 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 351 CTCCTCTCCGCCGACGAGCTTTTTCACGACGGTGTTCTTCTCCCTCTTGACCTCCTCTCC 410 Query 240 GTGAAGTCAGAGCTTCCA-TCGGACCCGAATATCGTAGAATGCGACCCGGATCCATCTCC 298 || || ||||||||| || || ||||||||||||| |||||||||||||||||||||||| Sbjct 411 GTTAAATCAGAGCTT-CAGTCCGACCCGAATATCGCAGAATGCGACCCGGATCCATCTCC 469 Query 299 TTC-ACCGGTTACTTTGATTACAGAGCAAAAGAA-TGATCTTGAACCCGGTTTAGGATCC 356 ||| || || || |||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 470 TTCGACTGG-TAGTTTGATTACAGAGCAAAA-AAGTGATCTTGAACCCGGTTTAGGATCC 527 Query 357 GAGTTGACCCGAGAAACAACGGTTTCGAAGCGGTGGAGAGATATTTTCagaaagagcgaa 416 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 528 GAGTTGACCCGAGAAACAACGGTTTCGAAGCGGTGGAGAGATATTTTCAGGAAGAGCGAA 587 Query 417 accaaaccgccggggaagaaagagaaggtgaaagagaataagaaggagaagaagaaaaCC 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 588 ACCAAACCGCCGGGGAAGAAAGAGAAGGTGAAAGAGAATAAGAAGGAGAAGAAGAAAACC 647 Query 477 GGGTCGGGTCCCGGTTCGGGTTCGGGTTCAGGAGCAGAGCTGAATATCAACATTTGGCCG 536 ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 648 GGGTCGGGTCCAAGTTCGGGTTCGGGTTCAGGAGCGGAGCTGAATATCAACATTTGGCCG 707 Query 537 TTTTCAAGAAGTAGATCCGCAGGGAACAACGTGACCCGACCCAGAATGTCGTTTGGAGCT 596 |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct 708 TTTTCAAGAAGTAGATCCGCTGGTAACAACGTGACCCGACCGAGAATGTCGTTTGGAGCT 767 Query 597 CCGACGACTCGGAAAGTCAGCAGTGCGCCGTGTTCACGTAGCAACTCCACCGGAGAATCC 656 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 768 CCGACGACCCGGAAAGTAAGCAGTGCGCCGTGTTCACGTAGCAACTCCACCGGAGAATCC 827 Query 657 AAATCGAGGAAGTGGCCGAGTAGTCCCGGTCGTAACGGCGTGCATCTTGGTCGGAGCAGT 716 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct 828 AAATCGAGGAAGTGGCCGAGTAGTCCCAGTCGTAACGGCGTGCATCTTGGTCGGAATAGT 887 Query 717 CCGGTTTGGCAAGTCCGGCGTGGAGGTGGAGCTCCGGTTGGGAAAACGATACCCGAGCCG 776 |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||| Sbjct 888 CCGGTTTGGCAAGTCCGGCGTGGAGGAGGAGCTCCGGTTGGGAAAACGATACCGGAACCG 947 Query 777 ATGGGTCGGGTTGTGGGTAAAAGGGAGATTCCCGAGACGCGTAAGGGTAAAACGGTAATT 836 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 948 ATGGGTCGGGTTGTGGGTAAAAGGGAGATTCCCGAGACGCGTAAGGGTAAAACAGTAATT 1007 Query 837 GAGAGCAATAAAGCAAAAGTCTTGAACTTGAACGTGCCTATGTGCATCGGTTATCGGAGC 896 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1008 GAGAGCAATAAAGCAAAAGTCTTGAACTTGAACGTGCCTATGTGCATCGGTTATCGGAGC 1067 Query 897 CGGTTAAGCTGCAGAACCGAAGAGAGT-G-G-TGGTGGTAATAGTAACATTGGGAGTGAC 953 ||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||| Sbjct 1068 CGGTTAAGCTGCAGAACCGAAGAGAGTAGTGGTGGTGGTAATAGTAACATTGGGAGTGAC 1127 Query 954 AA---TAATAATAATAACGTCAACGCTAATAATCCTAATCCTAATGGTTTATTTGGCTTT 1010 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1128 AACAATAATAATAATAACGCCAACGCTAATAATCCTAATCCTAATGGTTTATTTGGCTTT 1187 Query 1011 CGTAATCTCTTCATTAAGAAAGTTTATTGACTTTATTTGTTTTGTTTT 1058 ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1188 CGTAATCTCTTCATTAAGAAAGTGTATTGACTTTATTTGTTTTGTTTT 1235 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 51907363530 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5