BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg946287 Length=950 Score E Sequences producing significant alignments: (Bits) Value AT4G18960.1 | Symbols: AG | K-box region and MADS-box transcrip... 1515 0.0 AT5G13790.1 | Symbols: AGL15 | AGAMOUS-like 15 | chr5:4449014-4... 82.4 7e-15 > AT4G18960.1 | Symbols: AG | K-box region and MADS-box transcription factor family protein | chr4:10382856-10388539 FORWARD LENGTH=1532 Length=1532 Score = 1515 bits (820), Expect = 0.0 Identities = 856/874 (98%), Gaps = 0/874 (0%) Strand=Plus/Plus Query 57 GCACAACCTTACCTTCCATTTTCTGCAACTTCTCCAAATCTCATACTTTCCAGAAAATCA 116 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 392 GCACAACCTTACCTTCCATTTTCTGCAACTTCTCCAAATCTCATACTTTCCAGAAAATCA 451 Query 117 TTTTCCCAAGAAAAATAAAACTTTCCCCTTTGTTCTTCTCCCCCCAACAGCAATCACGGC 176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 452 TTTTCCCAAGAAAAATAAAACTTTCCCCTTTGTTCTTCTCCCCCCAACAGCAATCACGGC 511 Query 177 GTACCAATCGGAGCTAGGAGGAGATTCCTCTCCCTTGAGGAAATCTGGGAGAGGAAAGAT 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 512 GTACCAATCGGAGCTAGGAGGAGATTCCTCTCCCTTGAGGAAATCTGGGAGAGGAAAGAT 571 Query 237 CGAAATCAAACGGATCGAGAACACAACGAATCGTCAAGTTACTTTTTGCAAACGTAGAAA 296 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 572 CGAAATCAAACGGATCGAGAACACAACGAATCGTCAAGTCACTTTTTGCAAACGTAGAAA 631 Query 297 TGGTTTGCTCAAGAAAGCTTACGAGCTCTCTGTTCTTTGTGATGCTGAAGTCGCACTCAT 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 632 TGGTTTGCTCAAGAAAGCTTACGAGCTCTCTGTTCTTTGTGATGCTGAAGTCGCACTCAT 691 Query 357 CGTCTTCTCTAGCCGTGGTCGTCTCTATGAGTACTCTAACAACAGTGTAAAAGGGACAAT 416 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 692 CGTCTTCTCTAGCCGTGGTCGTCTCTATGAGTACTCTAACAACAGTGTAAAAGGGACTAT 751 Query 417 TGAGAGGTACAAGAAGGCAATCTCAGATAATTCTAACACCGGATCGGTGGCAGAAATTAA 476 ||||||||||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct 752 TGAGAGGTACAAGAAGGCAATATCGGACAATTCTAACACCGGATCGGTGGCAGAAATTAA 811 Query 477 TGCACAGTATTATCAACAAGAATCGGCCAAATTGCGTCAACAAATTATCAGCATACAAAA 536 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 812 TGCACAGTATTATCAACAAGAATCAGCCAAATTGCGTCAACAAATAATCAGCATACAAAA 871 Query 537 TTCCAACAGGCAATTGATGGGTGAGACGATAGGGTCAATGTCTCCCAAAGAGCTCAGGAA 596 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 872 CTCCAACAGGCAATTGATGGGTGAGACGATAGGGTCAATGTCTCCCAAAGAGCTCAGGAA 931 Query 597 TTTGGAAGGCAGATTAGAGAGAAGTATTACCCGAATCCGATCCAAGAAGAATGAGCTCAT 656 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 932 CTTGGAAGGCAGATTAGAGAGAAGTATTACCCGAATCCGATCCAAGAAGAATGAGCTCTT 991 Query 657 ATTTTCAGAAATCGACTACATGCAGAAAAGAGAAGTTGATTTGCATAACGATAACCAGCT 716 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 992 ATTTTCTGAAATCGACTACATGCAGAAAAGAGAAGTTGATTTGCATAACGATAACCAGAT 1051 Query 717 TCTTCGTGCAAAGATAGCTGAAAATGAGAGGAACAATCCGAGTATAAGTCTGATGCCAGG 776 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1052 TCTTCGTGCAAAGATAGCTGAAAATGAGAGGAACAATCCGAGTATAAGTCTAATGCCAGG 1111 Query 777 AGGATCTAACTACGAGCAGATTATGCCACCGCCTCAAACGCAATCTCAACCGTTTGATTC 836 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct 1112 AGGATCTAACTACGAGCAGCTTATGCCACCACCTCAAACGCAATCTCAACCGTTTGATTC 1171 Query 837 ACGGAATTATTTCCAAGTCGCGGCATTGCAACCTAACAACCACCATTACTCATCCGCGGG 896 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1172 ACGGAATTATTTCCAAGTCGCGGCATTGCAACCTAACAATCACCATTACTCATCCGCGGG 1231 Query 897 TCGCCAAGACCAAACTGCTCTTCAGTTAGTGTAA 930 ||||||||||||||| ||||| |||||||||||| Sbjct 1232 TCGCCAAGACCAAACCGCTCTCCAGTTAGTGTAA 1265 > AT5G13790.1 | Symbols: AGL15 | AGAMOUS-like 15 | chr5:4449014-4450843 REVERSE LENGTH=962 Length=962 Score = 82.4 bits (44), Expect = 7e-15 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 297 TGGTTTGCTCAAGAAAGCTTACGAGCTCTCTGTTCTTTGTGATGCTGAAGTCGCACTCAT 356 ||| || || ||||||||| ||||||||||||||||||||||||||||| || |||| Sbjct 119 TGGGTTACTTAAGAAAGCTCGTGAGCTCTCTGTTCTTTGTGATGCTGAAGTTGCTGTCAT 178 Query 357 CGTCTTCTCTA 367 ||||||||||| Sbjct 179 CGTCTTCTCTA 189 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46466585975 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5