BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg946346
Length=1423
Score E
Sequences producing significant alignments: (Bits) Value
AT4G18480.1 | Symbols: CHLI1, CH42, CH-42, CHL11, CHLI-1 | P-lo... 2311 0.0
AT5G45930.1 | Symbols: CHLI2, CHL I2, CHLI-2 | magnesium chelat... 1011 0.0
> AT4G18480.1 | Symbols: CHLI1, CH42, CH-42, CHL11, CHLI-1 | P-loop
containing nucleoside triphosphate hydrolases superfamily
protein | chr4:10201672-10203469 REVERSE LENGTH=1608
Length=1608
Score = 2311 bits (1251), Expect = 0.0
Identities = 1370/1428 (96%), Gaps = 6/1428 (0%)
Strand=Plus/Plus
Query 1 AAGCCAATCAGAAGCTGAGTAATACTCTAAGCTCACACAAAAATGGCGtctcttcttgga 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 68 AAGCCAATCAGAAGCTGAGTAA-ACTCTAAGCTCACACAAAAATGGCGTCTCTTCTTGGA 126
Query 61 acatcttcttctgctatctgggcttctccttctctctcttcttcttcctctacaccttcg 120
|||||||||||||| ||||||||||||||||| ||||||||| ||||||| | ||||||
Sbjct 127 ACATCTTCTTCTGCAATCTGGGCTTCTCCTTCACTCTCTTCTCCTTCCTCAAAACCTTCC 186
Query 121 acttctcCCATTTGCTTCAGGCCAGGGAAATTGTTTGGAAGCAAGTTAAATGCAGGAATC 180
| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 187 TCCTCCCCCATTTGCTTCAGGCCAGGAAAATTGTTTGGAAGCAAGTTAAATGCAGGAATC 246
Query 181 CAGATAAGGCCAAAGAAGAACAGGTCTCGTTACCATGTTTCTGTTATGAATGTAGCCACA 240
|| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 247 CAAATAAGGCCAAAGAAGAACAGGTCTCGTTACCATGTTTCGGTTATGAATGTAGCCACT 306
Query 241 GAAATCAACTCTACTGAAC-A--AGTAGGGAAGTTTGATTCAAAGAAGAGTGCGAGACCG 297
||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 307 GAAATCAACTCTACTGAACAAGTAGTAGGGAAGTTTGATTCAAAGAAGAGTGCGAGACCG 366
Query 298 GTTTATCCATTTGCAGCTATAGTAGGGCAAGATGAGATGAAGTTATGTCTTCTGTTGAAT 357
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 367 GTTTATCCATTTGCAGCTATAGTAGGGCAAGATGAGATGAAGTTATGTCTTTTGTTGAAT 426
Query 358 GTGATTGATCCAAAGATTGGTGGTGTGATGATTATGGGAGATAGAGGAACCGGAAAATCT 417
|| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 427 GTTATTGATCCAAAGATTGGTGGTGTTATGATTATGGGAGATAGAGGAACTGGAAAATCT 486
Query 418 ACAACTGTTAGATCATTAGTTGATCTGTTACCAGAGATTAATGTAGTTGCAGGTGACCCG 477
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 487 ACAACTGTTAGATCATTAGTTGATCTGTTACCTGAGATTAATGTAGTTGCAGGTGACCCG 546
Query 478 TATAACTCGGATCCGATAGATCCTGAGTTTATGGGTGTTGAAGTAAGAGAGAGAGTTGAG 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 547 TATAACTCGGATCCGATAGATCCTGAGTTTATGGGTGTTGAAGTAAGAGAGAGAGTTGAG 606
Query 538 AAAGGAGAGAAAGTTCCGGTTATTGCGACTAAGATTAATATGGTTGATCTTCCGTTGGGT 597
||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 607 AAAGGAGAGCAAGTTCCTGTTATTGCGACTAAGATTAATATGGTTGATCTTCCTTTGGGT 666
Query 598 GCAACAGAAGATAGAGTTTGTGGAACAATCGATATCGAAAAGGCTTTGACAGAAGGTGTA 657
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 667 GCAACAGAAGATAGAGTTTGTGGAACCATCGATATCGAAAAGGCTTTGACAGAAGGTGTA 726
Query 658 AAAGCCTTTGAGCCTGGTTTGTTGGCTAAAGCTAATAGAGGGATTCTCTATGTTGATGAA 717
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 727 AAAGCCTTTGAGCCTGGTTTGTTGGCTAAAGCTAATAGAGGGATTCTTTATGTTGATGAA 786
Query 718 GTTAATCTTTTGGATGATCATTTGGTTGATGTTCTTTTGGATTCAGCTGCTTCCGGTTGG 777
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 787 GTTAATCTCTTGGATGATCATTTGGTTGATGTTCTTTTGGATTCAGCTGCTTCTGGTTGG 846
Query 778 AATACGGTTGAGAGAGAAGGAATTTCGATTTCCCACCCGGCGAGGTTTATCTTAATTGGT 837
|||||||||||||||||||| ||||||||||| |||||||||||||||||||| || |||
Sbjct 847 AATACGGTTGAGAGAGAAGGGATTTCGATTTCTCACCCGGCGAGGTTTATCTTGATCGGT 906
Query 838 TCGGGAAATCCGGAAGAAGGAGAGCTTAGGCCACAGCTTCTTGATCGGTTTGGAATGCAT 897
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 907 TCAGGAAATCCGGAAGAAGGAGAGCTTAGGCCACAGCTTCTTGATCGGTTTGGTATGCAT 966
Query 898 GCGCAAGTAGGGACGGTTAGAGATGCTGATTTACGAGTCAAGATTGTCGAAGAGAGAGCT 957
|| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 967 GCACAAGTAGGGACGGTTAGAGATGCTGATTTACGGGTCAAGATTGTTGAAGAGAGAGCT 1026
Query 958 CGTTTCGATAGTGACCCAAAGGATTTCCGTGAAACTTACAAAACTGAGCAGGACAAGCTT 1017
|||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1027 CGTTTCGATAGTAACCCAAAGGATTTCCGTGACACTTACAAAACCGAGCAGGACAAGCTT 1086
Query 1018 CAAGACCAGATTTCAACTGCTAGGGCAAATCTTTCCTCGGTTCAGATTGATCGGGAATTG 1077
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 1087 CAAGACCAGATTTCAACTGCTAGGGCAAACCTTTCCTCGGTTCAGATTGATAGGGAATTG 1146
Query 1078 AAGGTGAAGATCTCTAGGGTATGTTCAGAGCTCAATGTCGACGGGTTGAGAGGGGACATA 1137
||||||||||||||||| || ||||||||||||||||| || ||||||||||| ||||||
Sbjct 1147 AAGGTGAAGATCTCTAGAGTTTGTTCAGAGCTCAATGTTGATGGGTTGAGAGGAGACATA 1206
Query 1138 GTGACTAACAGAGCAGCAAAAGCACTTGCAGCTCTCAAAGGGAAAGATCGAGTAACTCCA 1197
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1207 GTGACTAACAGAGCAGCAAAAGCACTTGCAGCTCTCAAAGGAAAAGATCGAGTAACTCCA 1266
Query 1198 GATGATGTTGCAACCGTTATCCCTAACTGCTTAAGGCACCGTCTGAGGAAAGATCCACTG 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1267 GATGATGTTGCAACCGTTATCCCTAACTGCTTAAGGCACCGTCTGAGGAAAGATCCACTG 1326
Query 1258 GAATCTATCGATTCGGGAGTTCTAGTTTCCGAGAAGTTTGCCGAGATTTTCAGCTGAATA 1317
|||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1327 GAATCTATTGATTCAGGAGTTCTAGTTTCCGAGAAGTTCGCCGAGATTTTCAGCTGAATA 1386
Query 1318 GGAGATTCGATTCTGTGATCCTTTT-CTT-AACTTTTCCTACTCTGTAAACAGTGAGAAG 1375
|||||||||||||||||||| |||| ||| ||||||| ||||||||||||| ||||||||
Sbjct 1387 GGAGATTCGATTCTGTGATCATTTTTCTTTAACTTTTTCTACTCTGTAAACGGTGAGAAG 1446
Query 1376 AACAAAAACTATAAACAGGCAAATCTGATTGAATATAGAGTCTATGCT 1423
||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1447 AACCAAAACTATAAACAGGCAAATCTGATTGAATATAGAGTCTATGCT 1494
> AT5G45930.1 | Symbols: CHLI2, CHL I2, CHLI-2 | magnesium chelatase
i2 | chr5:18628007-18629697 FORWARD LENGTH=1477
Length=1477
Score = 1011 bits (547), Expect = 0.0
Identities = 1044/1277 (82%), Gaps = 61/1277 (5%)
Strand=Plus/Plus
Query 42 AATGGCGtctcttcttggaacatcttcttctgctatc-tgggcttctccttc-tctctct 99
||||||||||||||| |||| |||| ||||| | ||| || || | || || | | |||
Sbjct 88 AATGGCGTCTCTTCTCGGAAGATCTCCTTCTTCAATCTTGACCTGC-CC-TCGTATTTCT 145
Query 100 tcttcttcctctacaccttcgacttctcCCAT-T-TGCTTCAGG-CCAGGGAAA-TTGTT 155
||| ||||||| ||| |||| | | |||||| | |||||| || |||| |||| || |
Sbjct 146 TCTCCTTCCTCAACATCTTC-A-ATGTCCCATCTCTGCTTC-GGACCAGAGAAACTT-TC 201
Query 156 TGGAAGCAAGTTAAATGCAGGAATCCAGATAAGGCCAAAGAAGAACAGGTCTCGTTACCA 215
| | | ||| ||| | ||| || || |||||||||||||| |||||||||||
Sbjct 202 T-G--G-AAG---AAT-C--CAATTCA-AT----CCAAAGAAGAACAGATCTCGTTACCA 246
Query 216 TGTTTCTGTTATGAATGTAGCCACAGAAATCAACTCTACTGAACAAGTAGGGAAGTTTGA 275
||| |||||||||||||| || ||||| ||||||||| |||||||| | |||| ||||
Sbjct 247 TGTCTCTGTTATGAATGTCGCTACAGAGATCAACTCTGTTGAACAAGCAAAGAAGATTGA 306
Query 276 TTCAAA-GAAGAGTGCGAGACCGGTTTATCCATTTGCAGCTATAGTAGGGCAAGATGAGA 334
|||||| ||| ||||| ||||| |||||||| ||||| |||||||| || ||||||||||
Sbjct 307 TTCAAAGGAA-AGTGCAAGACCTGTTTATCCGTTTGCTGCTATAGTTGGACAAGATGAGA 365
Query 335 TGAAGTTATGTCTTCTGTTGAATGTGATTGATCCAAAGATTGGTGGTGTGATGATTATGG 394
||||| |||| ||| |||| ||||||||||| || ||||| |||||||||||||| ||||
Sbjct 366 TGAAGCTATGCCTTTTGTTAAATGTGATTGACCCGAAGATAGGTGGTGTGATGATAATGG 425
Query 395 GAGATAGAGGAACCGGAAAATCTACAACTGTTAGATCATTAGTTGATCTG-TTACCAGAG 453
||||||||||||| || ||||| |||||||||||||| ||||||||| || || || |||
Sbjct 426 GAGATAGAGGAACTGGTAAATCAACAACTGTTAGATCTTTAGTTGATTTGCTT-CCTGAG 484
Query 454 ATTAATGTAGTTGCAGGTGACCCGTATAACTCGGATCCGATAGATCCTGAGTTTATGGGT 513
|| | ||| ||| | ||||| ||||||||||| || |||| ||||||||||| ||||||
Sbjct 485 ATCACTGTTGTTTCTGGTGATCCGTATAACTCAGACCCGAGAGATCCTGAGTGTATGGGA 544
Query 514 GTTGAAGTAAGAGAGAGAGTTGAGAAAGGAGAGAA-AGTT-CCGGTTATTGCGACTAAGA 571
||||||||||||| |||| | ||||| ||||| | || | ||||||| || || |
Sbjct 545 AAGGAAGTAAGAGAGAAAGTTCA-AAAGG-GAGAAGAATTGTCTGTTATTGAAACCAAAA 602
Query 572 TTAATATGGTTGATCTTCCGTTGGGTGCAACAGAAGATAGAGTTTGTGGAACAATCGATA 631
| ||||||||||||||||| |||||||| || |||||||||||||||||||| || ||||
Sbjct 603 TCAATATGGTTGATCTTCCTTTGGGTGCTACTGAAGATAGAGTTTGTGGAACTATTGATA 662
Query 632 TCGAAAAGGCTTTGACAGAAGGTGTAAAAGCCTTTGAGCCTGGTTTGTTGGCTAAAGCTA 691
||||||||||||| || |||||||| || || ||||||||||| | | ||||||||||
Sbjct 663 TCGAAAAGGCTTTAACCGAAGGTGTTAAGGCGTTTGAGCCTGGACTACTAGCTAAAGCTA 722
Query 692 ATAGAGGGATTCTCTATGTTGATGAAGTTAATCTTTTGGATGATCATTTGGTTGATGTTC 751
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 723 ATAGAGGGATTCTTTATGTTGATGAAGTTAATCTTTTGGATGATCATTTAGTTGATGTTC 782
Query 752 TT-TTGGATTCAGCTGCTTCCGGTTGGAATACGGTTGAGAGAGAAGGAATTTCGATTTCC 810
|| ||| |||||||||| || |||||||| || ||||| |||||||| || ||||||||
Sbjct 783 TTCTTG-ATTCAGCTGCATCTGGTTGGAACACTGTTGAAAGAGAAGGGATATCGATTTCT 841
Query 811 CACCCGGCGAGGTTTATCTTAATTGGTTCGGGAAATCCGGAAGAAGGAGAGCTTAGGCCA 870
|| || || |||||||| | |||||||| |||||||| ||||||||||||||||| |||
Sbjct 842 CATCCTGCTCGGTTTATCCTCATTGGTTCAGGAAATCCTGAAGAAGGAGAGCTTAGACCA 901
Query 871 CAGCTTCTTGATC-GGTTTGGAATGCATGCGCAAGTAGGGACGGTTAGAGATGCTGATTT 929
||||||||||| | ||||||| ||||| ||||||||||||||||||||||| || || |
Sbjct 902 CAGCTTCTTGA-CAGGTTTGGTATGCACGCGCAAGTAGGGACGGTTAGAGACGCCGAGCT 960
Query 930 -ACGAGTCAAGATTGTCGAAGAGA-GAGCTCGTTTCGATAGTGACCCAAAGGA-TTTCCG 986
| |||| |||||||| ||||| | ||||||||||||||||| |||||||||| |||| |
Sbjct 961 GA-GAGTTAAGATTGTTGAAGA-ACGAGCTCGTTTCGATAGTAACCCAAAGGAGTTTC-G 1017
Query 987 TGAAACTTA-CAA-AACTGAGCAGGAC--AAGCTTCAAGACCAGATTTCAACTGCTAGG- 1041
|||||||| ||| || || || || |||||||| || |||||| ||||||| ||
Sbjct 1018 AGAAACTTATCAAGAA--GAACA--ACTGAAGCTTCAGGAGCAGATTACAACTGCAAGAA 1073
Query 1042 GCAAATCTTTCCT-CGGTTCAGATTGATCGGGAATTGAAGGTGAAGATCTCTAGGGTATG 1100
|||| |||||| | | ||||||||||||| || ||||| ||||||||||||| ||| ||
Sbjct 1074 GCAA-TCTTTC-TGCAGTTCAGATTGATCAAGATTTGAAAGTGAAGATCTCTAAGGTCTG 1131
Query 1101 TTCAGAGCTCAATGTCGACGGGTTGAGAGGGGACATAGTGACTAA-CAGAGCAGCAAAAG 1159
| | ||||| | || || || |||||||| ||||| |||| ||| ||||||||| | ||
Sbjct 1132 TGCTGAGCTGGACGTTGATGGATTGAGAGGAGACATGGTGA-TAAACAGAGCAGCTAGAG 1190
Query 1160 CACTTGCAGCTCTCAAAGGGAA-AGATCGAGTAACTCCAGATGATGTTGCAACCGTTATC 1218
| |||||||| ||| |||| || ||||| ||| || | || ||||||| | |||||
Sbjct 1191 CGCTTGCAGCACTCCAAGG-AAGAGATCAAGTTACAGCTGAAGATGTTGGTATTGTTATA 1249
Query 1219 CCTAACTGCTTAAGGCACCGTCTGAGGAAAGATCCACTGGAATCTATCGATTCGGGAGTT 1278
|| || || || || ||| | || || ||||||||| |||| ||||| ||||||||| ||
Sbjct 1250 CCGAATTGTTTGAGACACAGACTCAGAAAAGATCCATTGGAGTCTATGGATTCGGGAATT 1309
Query 1279 CTAGTTTCCGAGAAGTT 1295
|| ||| ||||||||||
Sbjct 1310 CTCGTTACCGAGAAGTT 1326
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70130161365
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5