BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg946563 Length=573 Score E Sequences producing significant alignments: (Bits) Value AT4G16710.1 | Symbols: | glycosyltransferase family protein 28... 859 0.0 > AT4G16710.1 | Symbols: | glycosyltransferase family protein 28 | chr4:9398548-9399801 FORWARD LENGTH=919 Length=919 Score = 859 bits (465), Expect = 0.0 Identities = 541/577 (94%), Gaps = 8/577 (1%) Strand=Plus/Plus Query 4 AATCGAGTGGTGTAAAAAT---GGAGGATAGAGAGAATGCGAAGAGAGTAGTGTTTGTAA 60 ||||||| || ||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct 189 AATCGAGAAGTTTAAAAATGGAGGAGGATAGAGAGAATGCAAAGAGAGTAGTGTTTGTAA 248 Query 61 CTGTAGGAACAACGAGTTTCGATGCGCTTGTGAAAGCAGTGGTTAGTGAAGATGTTAAAG 120 ||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||| Sbjct 249 CTGTAGGAACAACGAGTTTCGATGCTCTTGTGAAAGCAGTGGTTAGTCAAAATGTTAAAG 308 Query 121 ACGAATTGCAGAAGAGAGGATTTACTCATCTTCTCATTCAAATGGGTCGAGGAATCTTTT 180 ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 309 ACGAACTGCAGAAGAGAGGATTTACTCATCTTCTTATTCAAATGGGTCGAGGAATCTTTT 368 Query 181 TCCCAAATAAGTGTGATGGAGCAGATGGATCATTAGTTGTGGATTACTTCACATTTTCCT 240 |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 369 TCCCAACTAAGTGTGATGGAGCGGATGGATCATTAGTTGTGGATTACTTCACATTTTCCT 428 Query 241 CGAGTATCGCTGATTATATTCGGTCTGCATCTCTTGTTATTAGTCACGCTGGATCTGGAA 300 | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 429 CAAGTATCGCTGATTATATTCGATCTGCATCTCTTGTTATTAGTCACGCTGGATCTGGAA 488 Query 301 GCATATTCGAGACACTAAAACTCGGGAAACCGTTGATTGTGGTAGTCAACGAAGATCTGA 360 | ||||| |||||||| ||||| |||||||| |||||||||||||| ||||||||||||| Sbjct 489 GTATATTTGAGACACTGAAACTAGGGAAACCATTGATTGTGGTAGTGAACGAAGATCTGA 548 Query 361 TGGACAATCATCAATGTGAATTAGCTGAAGCACTTGAAGAGAGGAAGCACTTGTACTACA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 549 TGGACAATCATCAATGTGAATTAGCTGAAGCACTTGAAGAGAGGAAGCACTTGTACTACA 608 Query 421 CTCGTCCTCACACCCTTCATCAAACCTTGACGAAAATGGAGTTGGAGTCTCTGGTTCAAT 480 ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct 609 CTCGTCCTCACTCCCTTCATCAAACCTTGACGAAAATGGAGTTGGGGTCTCTGGTTCAGT 668 Query 481 ATACTCCAGGGGACGGAACTCCTGTTGCCCGCATTATCGACAGGTTCCTCGGATTCCCTG 540 |||||||||| || |||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 669 ATACTCCAGGTGATGGAACTCCTGTTGCTCGCATTATCGACAGGTTCCTTGGATTCCCTG 728 Query 541 ATGATTAAGCAGAA-A--TA--TGAAAACAAGTGTTT 572 |||||||| || || | || ||||||||||||||| Sbjct 729 ATGATTAAACACAACACATACATGAAAACAAGTGTTT 765 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27528312556 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5