BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg946681 Length=267 Score E Sequences producing significant alignments: (Bits) Value ATCG00820.1 | Symbols: RPS19 | ribosomal protein S19 | chrC:840... 241 3e-63 > ATCG00820.1 | Symbols: RPS19 | ribosomal protein S19 | chrC:84005-84283 REVERSE LENGTH=279 Length=279 Score = 241 bits (130), Expect = 3e-63 Identities = 137/140 (98%), Gaps = 1/140 (1%) Strand=Plus/Minus Query 102 TCGCATGGCCAATCATTGTGGGTATAATGGTGGATGCCCGGGACCAAGTTATTATGATTT 161 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 145 TCGTATGGCCAATCATTGTGGGTATAATGGTGGATGCCCGGGACCAAGTTATTATGATTT 86 Query 162 CTTTTTCCGCCTTTGTATTAAGCTTCTCTATTTTTCTTAATAAATGCTTTGCTACAAAAG 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 85 CTTTTTCCGCCTTTGTATTAAGCTTCTCTATTTTTCTTAATAAATGCTTTGCTACAAAAG 26 Query 222 G-TGtttttttAGTGAACGT 240 | | |||||||||||||||| Sbjct 25 GGTTTTTTTTTAGTGAACGT 6 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 12215063007 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5